RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 LRRC75A-AS1Q8N1F1 130 aa9.67□□□□□ -0.86
CPSF1-203ENST00000527916 FBXW8Q8N3Y1 598 aa9.67□□□□□ -0.86
CPSF1-203ENST00000527916 RELL2Q8NC24 303 aaPredicted RBP9.67□□□□□ -0.86
CPSF1-203ENST00000527916 PPWD1Q96BP3 646 aaKnown RBP9.67□□□□□ -0.86
CPSF1-203ENST00000527916 CDK15Q96Q40 435 aa9.67□□□□□ -0.86
CPSF1-203ENST00000527916 SECISBP2Q96T21 854 aaKnown RBP9.67□□□□□ -0.86
CPSF1-203ENST00000527916 CNPPD1Q9BV87 410 aa9.67□□□□□ -0.86
CPSF1-203ENST00000527916 BRF2Q9HAW0 419 aa9.67□□□□□ -0.86
CPSF1-203ENST00000527916 ZNF629Q9UEG4 869 aaPredicted RBP9.67□□□□□ -0.86
CPSF1-203ENST00000527916 FETUBQ9UGM5 382 aa9.67□□□□□ -0.86
CPSF1-203ENST00000527916 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.67□□□□□ -0.86
CPSF1-203ENST00000527916 A0A0G2JMM0 328 aa9.66□□□□□ -0.86
CPSF1-203ENST00000527916 IQANK1A0A1B0GTG1 560 aa9.66□□□□□ -0.86
CPSF1-203ENST00000527916 EXOC1LA0A1B0GW35 172 aa9.66□□□□□ -0.86
CPSF1-203ENST00000527916 A0A1W2PPB8 328 aa9.66□□□□□ -0.86
CPSF1-203ENST00000527916 A0A1W2PRS3 328 aa9.66□□□□□ -0.86
CPSF1-203ENST00000527916 KIR3DP1A8MWS1 328 aa9.66□□□□□ -0.86
CPSF1-203ENST00000527916 G3V3Y1 287 aa9.66□□□□□ -0.86
CPSF1-203ENST00000527916 ZNF354AO60765 605 aaPredicted RBP9.66□□□□□ -0.86
CPSF1-203ENST00000527916 GUCY1B2O75343 617 aa9.66□□□□□ -0.86
CPSF1-203ENST00000527916 P04436 131 aa9.66□□□□□ -0.86
CPSF1-203ENST00000527916 NR2F6P10588 404 aa9.66□□□□□ -0.86
CPSF1-203ENST00000527916 BMP7P18075 431 aa9.66□□□□□ -0.86
CPSF1-203ENST00000527916 GCAP28676 217 aa9.66□□□□□ -0.86
CPSF1-203ENST00000527916 SLC37A1P57057 533 aa9.66□□□□□ -0.86
CPSF1-203ENST00000527916 SORDQ00796 357 aa9.66□□□□□ -0.86
CPSF1-203ENST00000527916 IFT88Q13099 833 aa9.66□□□□□ -0.86
CPSF1-203ENST00000527916 ZNF750Q32MQ0 723 aa9.66□□□□□ -0.86
CPSF1-203ENST00000527916 TTC19Q6DKK2 380 aaPredicted RBP9.66□□□□□ -0.86
CPSF1-203ENST00000527916 OR52E8Q6IFG1 317 aa9.66□□□□□ -0.86
CPSF1-203ENST00000527916 PRSS57Q6UWY2 283 aa9.66□□□□□ -0.86
CPSF1-203ENST00000527916 LYPD8Q6UX82 237 aa9.66□□□□□ -0.86
CPSF1-203ENST00000527916 DGAT2L6Q6ZPD8 337 aa9.66□□□□□ -0.86
CPSF1-203ENST00000527916 FAM47EQ6ZV65 393 aa9.66□□□□□ -0.86
CPSF1-203ENST00000527916 CXorf67Q86X51 503 aaPredicted RBP9.66□□□□□ -0.86
CPSF1-203ENST00000527916 C9orf40Q8IXQ3 194 aa9.66□□□□□ -0.86
CPSF1-203ENST00000527916 CIARTQ8N365 385 aaPredicted RBP9.66□□□□□ -0.86
CPSF1-203ENST00000527916 METTL4Q8N3J2 472 aa9.66□□□□□ -0.86
CPSF1-203ENST00000527916 EIF1ADQ8N9N8 165 aaKnown RBP9.66□□□□□ -0.86
CPSF1-203ENST00000527916 OR4F6Q8NGB9 312 aa9.66□□□□□ -0.86
CPSF1-203ENST00000527916 SLC22A8Q8TCC7 542 aa9.66□□□□□ -0.86
CPSF1-203ENST00000527916 ZNF483Q8TF39 744 aaPredicted RBP9.66□□□□□ -0.86
CPSF1-203ENST00000527916 RIT1Q92963 219 aa9.66□□□□□ -0.86
CPSF1-203ENST00000527916 PIGTQ969N2 578 aa9.66□□□□□ -0.86
CPSF1-203ENST00000527916 TP53INP1Q96A56 240 aa9.66□□□□□ -0.86
CPSF1-203ENST00000527916 NSUN5Q96P11 429 aaKnown RBP9.66□□□□□ -0.86
CPSF1-203ENST00000527916 SH2D2AQ9NP31 389 aa9.66□□□□□ -0.86
CPSF1-203ENST00000527916 SACM1LQ9NTJ5 587 aa9.66□□□□□ -0.86
CPSF1-203ENST00000527916 NMRK1Q9NWW6 199 aa9.66□□□□□ -0.86
CPSF1-203ENST00000527916 NFU1Q9UMS0 254 aa9.66□□□□□ -0.86
CPSF1-203ENST00000527916 NINQ8N4C6 2090 aa9.66□□□□□ -0.86
CPSF1-203ENST00000527916 WASHC1A8K0Z3 465 aa9.65□□□□□ -0.86
CPSF1-203ENST00000527916 A8MT66 165 aa9.65□□□□□ -0.86
CPSF1-203ENST00000527916 RNF212BA8MTL3 300 aa9.65□□□□□ -0.86
CPSF1-203ENST00000527916 HRKO00198 91 aa9.65□□□□□ -0.86
CPSF1-203ENST00000527916 PGRMC2O15173 223 aa9.65□□□□□ -0.86
CPSF1-203ENST00000527916 RIPK2O43353 540 aa9.65□□□□□ -0.86
CPSF1-203ENST00000527916 OR10H2O60403 315 aa9.65□□□□□ -0.86
CPSF1-203ENST00000527916 PRKRAO75569 313 aaKnown RBP9.65□□□□□ -0.86
CPSF1-203ENST00000527916 AIFM1O95831 613 aa9.65□□□□□ -0.86
CPSF1-203ENST00000527916 IL2RAP01589 272 aa9.65□□□□□ -0.86
CPSF1-203ENST00000527916 TAC1P20366 129 aa9.65□□□□□ -0.86
CPSF1-203ENST00000527916 PIK3R1P27986 724 aa9.65□□□□□ -0.86
CPSF1-203ENST00000527916 HSD17B3P37058 310 aa9.65□□□□□ -0.86
CPSF1-203ENST00000527916 ARL1P40616 181 aaPredicted RBP9.65□□□□□ -0.86
CPSF1-203ENST00000527916 HERVK_113P63132 956 aa9.65□□□□□ -0.86
CPSF1-203ENST00000527916 FOXO1Q12778 655 aa9.65□□□□□ -0.86
CPSF1-203ENST00000527916 ASPHQ12797 758 aa9.65□□□□□ -0.86
CPSF1-203ENST00000527916 ZNF267Q14586 743 aaPredicted RBP9.65□□□□□ -0.86
CPSF1-203ENST00000527916 SF3B4Q15427 424 aaKnown RBP eCLIP9.65□□□□□ -0.862e-6■■□□□ 14.4
CPSF1-203ENST00000527916 SLC22A10Q63ZE4 541 aa9.65□□□□□ -0.86
CPSF1-203ENST00000527916 RNF111Q6ZNA4 994 aa9.65□□□□□ -0.86
CPSF1-203ENST00000527916 SLC29A4Q7RTT9 530 aa9.65□□□□□ -0.86
CPSF1-203ENST00000527916 ULK2Q8IYT8 1036 aa9.65□□□□□ -0.86
CPSF1-203ENST00000527916 OR4K14Q8NGD5 310 aa9.65□□□□□ -0.86
CPSF1-203ENST00000527916 UHMK1Q8TAS1 419 aaKnown RBP9.65□□□□□ -0.86
CPSF1-203ENST00000527916 LINC01560Q8TB33 94 aa9.65□□□□□ -0.86
CPSF1-203ENST00000527916 ACMSDQ8TDX5 336 aa9.65□□□□□ -0.86
CPSF1-203ENST00000527916 PAQR8Q8TEZ7 354 aa9.65□□□□□ -0.86
CPSF1-203ENST00000527916 Q96MF0 132 aa9.65□□□□□ -0.86
CPSF1-203ENST00000527916 PIP5K1AQ99755 562 aa9.65□□□□□ -0.86
CPSF1-203ENST00000527916 ERVK-6Q9BXR3 956 aa9.65□□□□□ -0.86
CPSF1-203ENST00000527916 TXLNGYQ9BZA5 131 aa9.65□□□□□ -0.86
CPSF1-203ENST00000527916 ELOVL6Q9H5J4 265 aa9.65□□□□□ -0.86
CPSF1-203ENST00000527916 CXorf21Q9HAI6 301 aa9.65□□□□□ -0.86
CPSF1-203ENST00000527916 SEMA4BQ9NPR2 832 aaPredicted RBP9.65□□□□□ -0.86
CPSF1-203ENST00000527916 CNIH4Q9P003 139 aa9.65□□□□□ -0.86
CPSF1-203ENST00000527916 TRPS1Q9UHF7 1281 aa9.65□□□□□ -0.86
CPSF1-203ENST00000527916 ADAM21Q9UKJ8 722 aa9.65□□□□□ -0.86
CPSF1-203ENST00000527916 SNX6Q9UNH7 406 aa9.65□□□□□ -0.86
CPSF1-203ENST00000527916 ANKRD33BA6NCL7 494 aa9.64□□□□□ -0.87
CPSF1-203ENST00000527916 GLOD5A6NK44 160 aa9.64□□□□□ -0.87
CPSF1-203ENST00000527916 AHRRA9YTQ3 701 aa9.64□□□□□ -0.87
CPSF1-203ENST00000527916 GBAP04062 536 aa9.64□□□□□ -0.87
CPSF1-203ENST00000527916 HRGP04196 525 aa9.64□□□□□ -0.87
CPSF1-203ENST00000527916 KLK1P06870 262 aa9.64□□□□□ -0.87
CPSF1-203ENST00000527916 GSTA1P08263 222 aa9.64□□□□□ -0.87
CPSF1-203ENST00000527916 CELA3AP09093 270 aa9.64□□□□□ -0.87
CPSF1-203ENST00000527916 FBXO45P0C2W1 286 aa9.64□□□□□ -0.87
CPSF1-203ENST00000527916 HSD3B1P14060 373 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms