RNA–Protein interactions for RNA: ENST00000526991.2

CHMP1B-201, Transcript of charged multivesicular body protein 1B, humanhuman

APPRIS P1 BASIC

Gene CHMP1B, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-201ENST00000526991 THSD1Q9NS62 852 aa11.32□□□□□ -0.6
CHMP1B-201ENST00000526991 IL20RAQ9UHF4 553 aa11.32□□□□□ -0.6
CHMP1B-201ENST00000526991 COL4A3Q01955 1670 aa11.31□□□□□ -0.6
CHMP1B-201ENST00000526991 TSPAN11A1L157 253 aa11.31□□□□□ -0.6
CHMP1B-201ENST00000526991 C1QTNF3-AMACRE9PGA6 284 aa11.31□□□□□ -0.6
CHMP1B-201ENST00000526991 HMGN4O00479 90 aa11.31□□□□□ -0.6
CHMP1B-201ENST00000526991 DDCP20711 480 aa11.31□□□□□ -0.6
CHMP1B-201ENST00000526991 XKP51811 444 aa11.31□□□□□ -0.6
CHMP1B-201ENST00000526991 RAB15P59190 212 aa11.31□□□□□ -0.6
CHMP1B-201ENST00000526991 C21orf62-AS1Q17RA5 79 aa11.31□□□□□ -0.6
CHMP1B-201ENST00000526991 ZNF542PQ5EBM4 170 aa11.31□□□□□ -0.6
CHMP1B-201ENST00000526991 CLEC12AQ5QGZ9 265 aa11.31□□□□□ -0.6
CHMP1B-201ENST00000526991 ZFP41Q8N8Y5 198 aa11.31□□□□□ -0.6
CHMP1B-201ENST00000526991 LSM14AQ8ND56 463 aaKnown RBP11.31□□□□□ -0.6
CHMP1B-201ENST00000526991 C12orf66Q96MD2 445 aa11.31□□□□□ -0.6
CHMP1B-201ENST00000526991 PHOX2BQ99453 314 aa11.31□□□□□ -0.6
CHMP1B-201ENST00000526991 TREX2Q9BQ50 279 aaPredicted RBP11.31□□□□□ -0.6
CHMP1B-201ENST00000526991 ZNF717Q9BY31 904 aaPredicted RBP11.31□□□□□ -0.6
CHMP1B-201ENST00000526991 NEK6Q9HC98 313 aa11.31□□□□□ -0.6
CHMP1B-201ENST00000526991 ZCCHC3Q9NUD5 404 aaKnown RBP11.31□□□□□ -0.6
CHMP1B-201ENST00000526991 COQ3Q9NZJ6 369 aa11.31□□□□□ -0.6
CHMP1B-201ENST00000526991 FTSJ1Q9UET6 329 aa11.31□□□□□ -0.6
CHMP1B-201ENST00000526991 FBXW2Q9UKT8 454 aa11.31□□□□□ -0.6
CHMP1B-201ENST00000526991 YARS2Q9Y2Z4 477 aaKnown RBP11.31□□□□□ -0.6
CHMP1B-201ENST00000526991 SYNDIG1LA6NDD5 238 aa11.31□□□□□ -0.6
CHMP1B-201ENST00000526991 CCRL2O00421 344 aa11.31□□□□□ -0.6
CHMP1B-201ENST00000526991 MFN2O95140 757 aa11.31□□□□□ -0.6
CHMP1B-201ENST00000526991 EVI2BP34910 448 aa11.31□□□□□ -0.6
CHMP1B-201ENST00000526991 BSGP35613 385 aa11.31□□□□□ -0.6
CHMP1B-201ENST00000526991 SSR2P43308 183 aa11.31□□□□□ -0.6
CHMP1B-201ENST00000526991 UGT2B15P54855 530 aa11.31□□□□□ -0.6
CHMP1B-201ENST00000526991 CSNK2BP67870 215 aa11.31□□□□□ -0.6
CHMP1B-201ENST00000526991 SELENBP1Q13228 472 aa11.31□□□□□ -0.6
CHMP1B-201ENST00000526991 KRT33BQ14525 404 aa11.31□□□□□ -0.6
CHMP1B-201ENST00000526991 LASP1Q14847 261 aaKnown RBP11.31□□□□□ -0.6
CHMP1B-201ENST00000526991 IRF4Q15306 451 aa11.31□□□□□ -0.6
CHMP1B-201ENST00000526991 AGBL4Q5VU57 503 aa11.31□□□□□ -0.6
CHMP1B-201ENST00000526991 PNCKQ6P2M8 343 aa11.31□□□□□ -0.6
CHMP1B-201ENST00000526991 CASP12Q6UXS9 341 aa11.31□□□□□ -0.6
CHMP1B-201ENST00000526991 FAM129CQ86XR2 697 aa11.31□□□□□ -0.6
CHMP1B-201ENST00000526991 SFTPA2Q8IWL1 248 aa11.31□□□□□ -0.6
CHMP1B-201ENST00000526991 CCDC116Q8IYX3 515 aa11.31□□□□□ -0.6
CHMP1B-201ENST00000526991 ZNF557Q8N988 423 aaPredicted RBP11.31□□□□□ -0.6
CHMP1B-201ENST00000526991 KBTBD8Q8NFY9 601 aa11.31□□□□□ -0.6
CHMP1B-201ENST00000526991 FCRL4Q96PJ5 515 aa11.31□□□□□ -0.6
CHMP1B-201ENST00000526991 OR51I1Q9H343 314 aa11.31□□□□□ -0.6
CHMP1B-201ENST00000526991 LHX9Q9NQ69 397 aa11.31□□□□□ -0.6
CHMP1B-201ENST00000526991 DPP7Q9UHL4 492 aa11.31□□□□□ -0.6
CHMP1B-201ENST00000526991 ZAR1LA6NP61 321 aa11.3□□□□□ -0.6
CHMP1B-201ENST00000526991 CH25HO95992 272 aa11.3□□□□□ -0.6
CHMP1B-201ENST00000526991 H1F0P07305 194 aaKnown RBP11.3□□□□□ -0.6
CHMP1B-201ENST00000526991 ELAVL4P26378 380 aaKnown RBP11.3□□□□□ -0.6
CHMP1B-201ENST00000526991 AK4P27144 223 aaPredicted RBP11.3□□□□□ -0.6
CHMP1B-201ENST00000526991 HNRNPFP52597 415 aaKnown RBP11.3□□□□□ -0.6
CHMP1B-201ENST00000526991 RAB8AP61006 207 aa11.3□□□□□ -0.6
CHMP1B-201ENST00000526991 PLAG1Q6DJT9 500 aa11.3□□□□□ -0.6
CHMP1B-201ENST00000526991 NRSN1Q8IZ57 195 aa11.3□□□□□ -0.6
CHMP1B-201ENST00000526991 OR8K5Q8NH50 307 aa11.3□□□□□ -0.6
CHMP1B-201ENST00000526991 CCL4L1Q8NHW4 92 aa11.3□□□□□ -0.6
CHMP1B-201ENST00000526991 SMPDL3AQ92484 453 aa11.3□□□□□ -0.6
CHMP1B-201ENST00000526991 CXorf40BQ96DE9 158 aa11.3□□□□□ -0.6
CHMP1B-201ENST00000526991 C16orf58Q96GQ5 468 aa11.3□□□□□ -0.6
CHMP1B-201ENST00000526991 TEFMQ96QE5 360 aaKnown RBP11.3□□□□□ -0.6
CHMP1B-201ENST00000526991 AIF1LQ9BQI0 150 aa11.3□□□□□ -0.6
CHMP1B-201ENST00000526991 PLCXD1Q9NUJ7 323 aa11.3□□□□□ -0.6
CHMP1B-201ENST00000526991 TOR4AQ9NXH8 423 aa11.3□□□□□ -0.6
CHMP1B-201ENST00000526991 ZFR2Q9UPR6 939 aaKnown RBP11.3□□□□□ -0.6
CHMP1B-201ENST00000526991 SEC16AO15027 2179 aa11.3□□□□□ -0.6
CHMP1B-201ENST00000526991 A0A1W2PQU0 124 aa11.3□□□□□ -0.6
CHMP1B-201ENST00000526991 POM121BA6NF01 834 aa11.3□□□□□ -0.6
CHMP1B-201ENST00000526991 LOC110117498-PIK3R3F6TDL0 507 aa11.3□□□□□ -0.6
CHMP1B-201ENST00000526991 PGRMC2O15173 223 aa11.3□□□□□ -0.6
CHMP1B-201ENST00000526991 APODP05090 189 aa11.3□□□□□ -0.6
CHMP1B-201ENST00000526991 ASGR2P07307 311 aa11.3□□□□□ -0.6
CHMP1B-201ENST00000526991 IGFBP4P22692 258 aa11.3□□□□□ -0.6
CHMP1B-201ENST00000526991 KELP23276 732 aa11.3□□□□□ -0.6
CHMP1B-201ENST00000526991 RPS19P39019 145 aaKnown RBP11.3□□□□□ -0.6
CHMP1B-201ENST00000526991 BCL7AQ4VC05 210 aa11.3□□□□□ -0.6
CHMP1B-201ENST00000526991 CEP78Q5JTW2 689 aa11.3□□□□□ -0.6
CHMP1B-201ENST00000526991 SPANXN2Q5MJ10 180 aa11.3□□□□□ -0.6
CHMP1B-201ENST00000526991 ATAT1Q5SQI0 421 aa11.3□□□□□ -0.6
CHMP1B-201ENST00000526991 AGAP7PQ5VUJ5 663 aa11.3□□□□□ -0.6
CHMP1B-201ENST00000526991 ANKRD54Q6NXT1 300 aa11.3□□□□□ -0.6
CHMP1B-201ENST00000526991 IQCHQ86VS3 1027 aa11.3□□□□□ -0.6
CHMP1B-201ENST00000526991 LINC01555Q8NAE3 123 aa11.3□□□□□ -0.6
CHMP1B-201ENST00000526991 FAM46DQ8NEK8 389 aa11.3□□□□□ -0.6
CHMP1B-201ENST00000526991 OTULINQ96BN8 352 aa11.3□□□□□ -0.6
CHMP1B-201ENST00000526991 ZG16BQ96DA0 208 aa11.3□□□□□ -0.6
CHMP1B-201ENST00000526991 METTL2AQ96IZ6 378 aaKnown RBP11.3□□□□□ -0.6
CHMP1B-201ENST00000526991 GPA33Q99795 319 aa11.3□□□□□ -0.6
CHMP1B-201ENST00000526991 BCL7BQ9BQE9 202 aa11.3□□□□□ -0.6
CHMP1B-201ENST00000526991 DPH7Q9BTV6 452 aa11.3□□□□□ -0.6
CHMP1B-201ENST00000526991 ASPNQ9BXN1 380 aa11.3□□□□□ -0.6
CHMP1B-201ENST00000526991 SIRT3Q9NTG7 399 aaPredicted RBP11.3□□□□□ -0.6
CHMP1B-201ENST00000526991 AHSPQ9NZD4 102 aa11.3□□□□□ -0.6
CHMP1B-201ENST00000526991 KCNE3Q9Y6H6 103 aa11.3□□□□□ -0.6
CHMP1B-201ENST00000526991 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.29□□□□□ -0.6
CHMP1B-201ENST00000526991 LRRC72A6NJI9 287 aa11.29□□□□□ -0.6
CHMP1B-201ENST00000526991 E9PQ18 207 aa11.29□□□□□ -0.6
CHMP1B-201ENST00000526991 AP3D1O14617 1153 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms