RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 TREX1Q9NSU2 369 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 NLE1Q9NVX2 485 aaPredicted RBP3.7□□□□□ -1.82
CLK4-207ENST00000520909 ALKBH4Q9NXW9 302 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 HACD3Q9P035 362 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 VPS18Q9P253 973 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 KIF17Q9P2E2 1029 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 TXNDC16Q9P2K2 825 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 PSMC3IPQ9P2W1 217 aaPredicted RBP3.7□□□□□ -1.82
CLK4-207ENST00000520909 THAP10Q9P2Z0 257 aaPredicted RBP3.7□□□□□ -1.82
CLK4-207ENST00000520909 FETUBQ9UGM5 382 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 IL36AQ9UHA7 158 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 LGALS13Q9UHV8 139 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 FBXO9Q9UK97 447 aaPredicted RBP3.7□□□□□ -1.82
CLK4-207ENST00000520909 COMMD10Q9Y6G5 202 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 PIAS3Q9Y6X2 628 aa3.7□□□□□ -1.82
CLK4-207ENST00000520909 NUP210Q8TEM1 1887 aaPredicted RBP3.69□□□□□ -1.82
CLK4-207ENST00000520909 EYSQ5T1H1 3165 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 A0A0J9YYE9 177 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 C1orf232A0A0U1RR37 186 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 IQANK1A0A1B0GTG1 560 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 A0A1W2PQ67 120 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 OR51F1A6NGY5 319 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 NPIPB15A6NHN6 443 aaPredicted RBP3.69□□□□□ -1.82
CLK4-207ENST00000520909 LOC730098B7Z3J9 87 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 TRIM49D1C9J1S8 452 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 PLK4O00444 970 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 BCAT2O15382 392 aaPredicted RBP3.69□□□□□ -1.82
CLK4-207ENST00000520909 SLC7A4O43246 635 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 CIDEAO60543 219 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 RNASEH1O60930 286 aaKnown RBP3.69□□□□□ -1.82
CLK4-207ENST00000520909 KLF8O95600 359 aaPredicted RBP3.69□□□□□ -1.82
CLK4-207ENST00000520909 GOT2P00505 430 aaKnown RBP3.69□□□□□ -1.82
CLK4-207ENST00000520909 IL1BP01584 269 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 TRBC1P01850 177 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 C1QAP02745 245 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 CTSLP07711 333 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 SNRPAP09012 282 aaKnown RBP3.69□□□□□ -1.82
CLK4-207ENST00000520909 GLULP15104 373 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 IL9P15248 144 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 MAOAP21397 527 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 SAT1P21673 171 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 NFKBIAP25963 317 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 ATP5DP30049 168 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 HPDP32754 393 aaPredicted RBP3.69□□□□□ -1.82
CLK4-207ENST00000520909 SPRP35270 261 aaPredicted RBP3.69□□□□□ -1.82
CLK4-207ENST00000520909 GP5P40197 560 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 SLC1A2P43004 574 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 PSMD8P48556 350 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 SERPINB9P50453 376 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 ZNF140P52738 457 aaPredicted RBP3.69□□□□□ -1.82
CLK4-207ENST00000520909 MPP1Q00013 466 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 ELAVL3Q14576 367 aaKnown RBP3.69□□□□□ -1.82
CLK4-207ENST00000520909 RASA2Q15283 850 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 UGP2Q16851 508 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 TMEM35AQ53FP2 167 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 FASTKD1Q53R41 847 aaKnown RBP3.69□□□□□ -1.82
CLK4-207ENST00000520909 SGO1Q5FBB7 561 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 ZRANB3Q5FWF4 1079 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 C10orf62Q5T681 223 aaPredicted RBP3.69□□□□□ -1.82
CLK4-207ENST00000520909 GRTP1Q5TC63 336 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 LGSNQ5TDP6 509 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 FAM46CQ5VWP2 391 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 ZNF470Q6ECI4 717 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 METTL2BQ6P1Q9 378 aaKnown RBP3.69□□□□□ -1.82
CLK4-207ENST00000520909 PACS1Q6VY07 963 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 TPRG1Q6ZUI0 275 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 TAS2R42Q7RTR8 314 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 PTAR1Q7Z6K3 402 aaPredicted RBP3.69□□□□□ -1.82
CLK4-207ENST00000520909 SDCCAG8Q86SQ7 713 aaPredicted RBP3.69□□□□□ -1.82
CLK4-207ENST00000520909 LDB1Q86U70 411 aaPredicted RBP3.69□□□□□ -1.82
CLK4-207ENST00000520909 TSPAN33Q86UF1 283 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 GPAT4Q86UL3 456 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 MOGAT3Q86VF5 341 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 MMAAQ8IVH4 418 aaKnown RBP3.69□□□□□ -1.82
CLK4-207ENST00000520909 OR2AK2Q8NG84 335 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 OR13J1Q8NGT2 312 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 OR4L1Q8NH43 312 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 GANCQ8TET4 914 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 ZNF473Q8WTR7 871 aaKnown RBP3.69□□□□□ -1.82
CLK4-207ENST00000520909 FAM3CQ92520 227 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 DNASE1L2Q92874 299 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 TAAR8Q969N4 342 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 TLCD1Q96CP7 247 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 ECHDC3Q96DC8 303 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 ATXN7L3BQ96GX2 97 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 CDKN2AIPNLQ96HQ2 116 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 METTL2AQ96IZ6 378 aaKnown RBP3.69□□□□□ -1.82
CLK4-207ENST00000520909 PKNOX2Q96KN3 472 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 POM121L2Q96KW2 1035 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 MCCC1Q96RQ3 725 aaPredicted RBP3.69□□□□□ -1.82
CLK4-207ENST00000520909 KLF6Q99612 283 aaPredicted RBP3.69□□□□□ -1.82
CLK4-207ENST00000520909 CPNE1Q99829 537 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 SELENOSQ9BQE4 189 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 FAM167BQ9BTA0 163 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 MFSD1Q9H3U5 465 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 FAM96AQ9H5X1 160 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 PRSS16Q9NQE7 514 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 FBXO6Q9NRD1 293 aaPredicted RBP3.69□□□□□ -1.82
CLK4-207ENST00000520909 NSMCE4AQ9NXX6 385 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 IL17CQ9P0M4 197 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms