RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 IFNGR2P38484 337 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 OR1E2P47887 323 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 UBE2IP63279 158 aaKnown RBP9.37□□□□□ -0.91
SPARC-202ENST00000520687 BTN3A2P78410 334 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 TNFRSF17Q02223 184 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 ALDH6A1Q02252 535 aaKnown RBP9.37□□□□□ -0.91
SPARC-202ENST00000520687 EMX1Q04741 257 aaPredicted RBP9.37□□□□□ -0.91
SPARC-202ENST00000520687 DGCR6Q14129 220 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 DUSP7Q16829 419 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 DCST1Q5T197 706 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 FBXO42Q6P3S6 717 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 ZCCHC12Q6PEW1 402 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 UNQ6494/PRO21346Q6UXR6 183 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 SYT13Q7L8C5 426 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 RD3Q7Z3Z2 195 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 VN1R4Q7Z5H5 301 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 SLC44A2Q8IWA5 706 aaPredicted RBP9.37□□□□□ -0.91
SPARC-202ENST00000520687 AMER3Q8N944 861 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 FLVCR1-AS1Q8TAF5 88 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 C9orf43Q8TAL5 461 aaPredicted RBP9.37□□□□□ -0.91
SPARC-202ENST00000520687 CNIH3Q8TBE1 160 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 UTP15Q8TED0 518 aaKnown RBP9.37□□□□□ -0.91
SPARC-202ENST00000520687 ELP4Q96EB1 424 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 CRELD1Q96HD1 420 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 COL21A1Q96P44 957 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 OR2A5Q96R48 311 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 NRTNQ99748 197 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 ZFYVE21Q9BQ24 234 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 ACTRT3Q9BYD9 372 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 UCK2Q9BZX2 261 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 CCDC90BQ9GZT6 254 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 LHPPQ9H008 270 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 CHRDQ9H2X0 955 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 ANKRD19PQ9H560 264 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 NMNAT1Q9HAN9 279 aaPredicted RBP9.37□□□□□ -0.91
SPARC-202ENST00000520687 CACYBPQ9HB71 228 aaKnown RBP9.37□□□□□ -0.91
SPARC-202ENST00000520687 PLGRKTQ9HBL7 147 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 NECTIN3Q9NQS3 549 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 GPR27Q9NS67 375 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 IRAK4Q9NWZ3 460 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 IMPAD1Q9NX62 359 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 CNOT2Q9NZN8 540 aaKnown RBP9.37□□□□□ -0.91
SPARC-202ENST00000520687 PTGFRNQ9P2B2 879 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 WARS2Q9UGM6 360 aaKnown RBP9.37□□□□□ -0.91
SPARC-202ENST00000520687 EBF1Q9UH73 591 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 PILRAQ9UKJ1 303 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 CDC14AQ9UNH5 594 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 PCDHGA10Q9Y5H3 936 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 SPTY2D1-AS1A0A0U1RR47 76 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 BLACEA4D250 179 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 EFCAB10A6NFE3 127 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 PRAMEF25A6NGN4 478 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 CLCA1A8K7I4 914 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 STK25O00506 426 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 PGRMC2O15173 223 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 B4GALT2O60909 372 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 LGI1O95970 557 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 BCL10O95999 233 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 OR12D1P0DN82 309 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 SRFP11831 508 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 CYP4B1P13584 511 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 OSMP13725 252 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 GSTM3P21266 225 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 CPN2P22792 545 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 ACVR2AP27037 513 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 AK4P27144 223 aaPredicted RBP9.37□□□□□ -0.91
SPARC-202ENST00000520687 CRISP1P54107 249 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 CASP9P55211 416 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 RAB15P59190 212 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 SKP1P63208 163 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 ILKQ13418 452 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 LAPTM4AQ15012 233 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 MAPK11Q15759 364 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 UBE2UQ5VVX9 321 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 ZNF770Q6IQ21 691 aaPredicted RBP9.37□□□□□ -0.91
SPARC-202ENST00000520687 TCTN3Q6NUS6 607 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 KLHL35Q6PF15 583 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 USP53Q70EK8 1073 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 OOSP2Q86WS3 158 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 LURAP1LQ8IV03 231 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 ENTHD1Q8IYW4 607 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 SIX5Q8N196 739 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 LRRC25Q8N386 305 aaPredicted RBP9.37□□□□□ -0.91
SPARC-202ENST00000520687 SMYD1Q8NB12 490 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 GPR32P1Q8NGA4 272 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 OR4K14Q8NGD5 310 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 FNDC8Q8TC99 324 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 FAR1Q8WVX9 515 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 TANKQ92844 425 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 RAB8BQ92930 207 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 CNRIP1Q96F85 164 aaPredicted RBP9.37□□□□□ -0.91
SPARC-202ENST00000520687 POLR2J2Q9GZM3 115 aaKnown RBP9.37□□□□□ -0.91
SPARC-202ENST00000520687 RACGAP1Q9H0H5 632 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 POLR2J3Q9H1A7 115 aaKnown RBP9.37□□□□□ -0.91
SPARC-202ENST00000520687 UCK1Q9HA47 277 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 FKBP14Q9NWM8 211 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 GIN1Q9NXP7 522 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 KLHL28Q9NXS3 571 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 ERVK-18Q9QC07 812 aa9.37□□□□□ -0.91
SPARC-202ENST00000520687 CPNE7Q9UBL6 633 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms