RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 EHD3Q9NZN3 535 aa13.07□□□□□ -0.32
VEGFA-221ENST00000520265 PRODH2Q9UF12 536 aa13.07□□□□□ -0.32
VEGFA-221ENST00000520265 BOKQ9UMX3 212 aaPredicted RBP13.07□□□□□ -0.32
VEGFA-221ENST00000520265 TRAF6Q9Y4K3 522 aa13.07□□□□□ -0.32
VEGFA-221ENST00000520265 CROCCQ5TZA2 2017 aa13.06□□□□□ -0.32
VEGFA-221ENST00000520265 PIP5K1BO14986 540 aa13.06□□□□□ -0.32
VEGFA-221ENST00000520265 JUNP05412 331 aaKnown RBP13.06□□□□□ -0.32
VEGFA-221ENST00000520265 BPGMP07738 259 aa13.06□□□□□ -0.32
VEGFA-221ENST00000520265 FBXO45P0C2W1 286 aa13.06□□□□□ -0.32
VEGFA-221ENST00000520265 GP1BBP13224 206 aa13.06□□□□□ -0.32
VEGFA-221ENST00000520265 DDCP20711 480 aa13.06□□□□□ -0.32
VEGFA-221ENST00000520265 GPX3P22352 226 aa13.06□□□□□ -0.32
VEGFA-221ENST00000520265 MPIP34949 423 aa13.06□□□□□ -0.32
VEGFA-221ENST00000520265 PTGS2P35354 604 aa13.06□□□□□ -0.32
VEGFA-221ENST00000520265 CA7P43166 264 aa13.06□□□□□ -0.32
VEGFA-221ENST00000520265 RPP38P78345 283 aaKnown RBP13.06□□□□□ -0.32
VEGFA-221ENST00000520265 FUT7Q11130 342 aa13.06□□□□□ -0.32
VEGFA-221ENST00000520265 RPS6KA2Q15349 733 aa13.06□□□□□ -0.32
VEGFA-221ENST00000520265 TOMM20Q15388 145 aa13.06□□□□□ -0.32
VEGFA-221ENST00000520265 ZNF791Q3KP31 576 aaPredicted RBP13.06□□□□□ -0.32
VEGFA-221ENST00000520265 TRMT12Q53H54 448 aaKnown RBP13.06□□□□□ -0.32
VEGFA-221ENST00000520265 ANKRD26P1Q6NSI1 321 aa13.06□□□□□ -0.32
VEGFA-221ENST00000520265 GALNT18Q6P9A2 607 aa13.06□□□□□ -0.32
VEGFA-221ENST00000520265 PAOXQ6QHF9 649 aa13.06□□□□□ -0.32
VEGFA-221ENST00000520265 CROCCP2Q86T23 111 aa13.06□□□□□ -0.32
VEGFA-221ENST00000520265 CD163Q86VB7 1156 aa13.06□□□□□ -0.32
VEGFA-221ENST00000520265 DND1Q8IYX4 353 aaKnown RBP13.06□□□□□ -0.32
VEGFA-221ENST00000520265 CLYBLQ8N0X4 340 aa13.06□□□□□ -0.32
VEGFA-221ENST00000520265 ZNF615Q8N8J6 731 aa13.06□□□□□ -0.32
VEGFA-221ENST00000520265 ZFP62Q8NB50 900 aaPredicted RBP13.06□□□□□ -0.32
VEGFA-221ENST00000520265 OR52N2Q8NGI0 321 aa13.06□□□□□ -0.32
VEGFA-221ENST00000520265 TSSK3Q96PN8 268 aa13.06□□□□□ -0.32
VEGFA-221ENST00000520265 PSMG3-AS1Q96PY0 264 aa13.06□□□□□ -0.32
VEGFA-221ENST00000520265 NXF5Q9H1B4 397 aaKnown RBP13.06□□□□□ -0.32
VEGFA-221ENST00000520265 METTL7AQ9H8H3 244 aa13.06□□□□□ -0.32
VEGFA-221ENST00000520265 MYNNQ9NPC7 610 aa13.06□□□□□ -0.32
VEGFA-221ENST00000520265 TUBA8Q9NY65 449 aaPredicted RBP13.06□□□□□ -0.32
VEGFA-221ENST00000520265 DTX4Q9Y2E6 619 aa13.06□□□□□ -0.32
VEGFA-221ENST00000520265 NPFFR2Q9Y5X5 522 aa13.06□□□□□ -0.32
VEGFA-221ENST00000520265 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.06□□□□□ -0.32
VEGFA-221ENST00000520265 HIVEP3Q5T1R4 2406 aa13.05□□□□□ -0.32
VEGFA-221ENST00000520265 HECTD1Q9ULT8 2610 aa13.05□□□□□ -0.32
VEGFA-221ENST00000520265 SERTM1A2A2V5 107 aa13.05□□□□□ -0.32
VEGFA-221ENST00000520265 TYROBPO43914 113 aa13.05□□□□□ -0.32
VEGFA-221ENST00000520265 GPC1P35052 558 aa13.05□□□□□ -0.32
VEGFA-221ENST00000520265 KRT20P35900 424 aa13.05□□□□□ -0.32
VEGFA-221ENST00000520265 MAGEA5P43359 124 aa13.05□□□□□ -0.32
VEGFA-221ENST00000520265 SERPINB4P48594 390 aa13.05□□□□□ -0.32
VEGFA-221ENST00000520265 MAP4K2Q12851 820 aa13.05□□□□□ -0.32
VEGFA-221ENST00000520265 CHI3L2Q15782 390 aa13.05□□□□□ -0.32
VEGFA-221ENST00000520265 CMPK2Q5EBM0 449 aa13.05□□□□□ -0.32
VEGFA-221ENST00000520265 MTFR2Q6P444 385 aa13.05□□□□□ -0.32
VEGFA-221ENST00000520265 TMEM107Q6UX40 140 aa13.05□□□□□ -0.32
VEGFA-221ENST00000520265 MAMDC2Q7Z304 686 aaPredicted RBP13.05□□□□□ -0.32
VEGFA-221ENST00000520265 FBXW8Q8N3Y1 598 aa13.05□□□□□ -0.32
VEGFA-221ENST00000520265 SIMC1Q8NDZ2 872 aa13.05□□□□□ -0.32
VEGFA-221ENST00000520265 OR2T11Q8NH01 316 aa13.05□□□□□ -0.32
VEGFA-221ENST00000520265 FAM76AQ8TAV0 307 aa13.05□□□□□ -0.32
VEGFA-221ENST00000520265 MGARPQ8TDB4 240 aa13.05□□□□□ -0.32
VEGFA-221ENST00000520265 TP53INP1Q96A56 240 aa13.05□□□□□ -0.32
VEGFA-221ENST00000520265 PPP1R36Q96LQ0 422 aa13.05□□□□□ -0.32
VEGFA-221ENST00000520265 ZNF597Q96LX8 424 aa13.05□□□□□ -0.32
VEGFA-221ENST00000520265 ZNF681Q96N22 645 aa13.05□□□□□ -0.32
VEGFA-221ENST00000520265 STMN4Q9H169 189 aaPredicted RBP13.05□□□□□ -0.32
VEGFA-221ENST00000520265 IL1RL2Q9HB29 575 aa13.05□□□□□ -0.32
VEGFA-221ENST00000520265 ASH1LQ9NR48 2969 aaKnown RBP13.05□□□□□ -0.32
VEGFA-221ENST00000520265 DDX18Q9NVP1 670 aaKnown RBP13.05□□□□□ -0.32
VEGFA-221ENST00000520265 CNIH4Q9P003 139 aa13.05□□□□□ -0.32
VEGFA-221ENST00000520265 SH3BP4Q9P0V3 963 aa13.05□□□□□ -0.32
VEGFA-221ENST00000520265 B4GALT7Q9UBV7 327 aa13.05□□□□□ -0.32
VEGFA-221ENST00000520265 OR10H1Q9Y4A9 318 aa13.05□□□□□ -0.32
VEGFA-221ENST00000520265 DNAJC15Q9Y5T4 150 aa13.05□□□□□ -0.32
VEGFA-221ENST00000520265 LRRK2Q5S007 2527 aa13.05□□□□□ -0.32
VEGFA-221ENST00000520265 FLNBO75369 2602 aaKnown RBP13.04□□□□□ -0.32
VEGFA-221ENST00000520265 PEX11AO75192 247 aa13.04□□□□□ -0.32
VEGFA-221ENST00000520265 NME6O75414 186 aaPredicted RBP13.04□□□□□ -0.32
VEGFA-221ENST00000520265 LYPLA1O75608 230 aaPredicted RBP13.04□□□□□ -0.32
VEGFA-221ENST00000520265 CBX7O95931 251 aa13.04□□□□□ -0.32
VEGFA-221ENST00000520265 ABCD3P28288 659 aa13.04□□□□□ -0.32
VEGFA-221ENST00000520265 SERPINB5P36952 375 aa13.04□□□□□ -0.32
VEGFA-221ENST00000520265 MC3RP41968 323 aa13.04□□□□□ -0.32
VEGFA-221ENST00000520265 HSPB3Q12988 150 aa13.04□□□□□ -0.32
VEGFA-221ENST00000520265 PDCD2Q16342 344 aaPredicted RBP13.04□□□□□ -0.32
VEGFA-221ENST00000520265 NTRK2Q16620 822 aa13.04□□□□□ -0.32
VEGFA-221ENST00000520265 ATP6AP1LQ52LC2 224 aa13.04□□□□□ -0.32
VEGFA-221ENST00000520265 ZNF628Q5EBL2 1059 aa13.04□□□□□ -0.32
VEGFA-221ENST00000520265 HHATQ5VTY9 493 aa13.04□□□□□ -0.32
VEGFA-221ENST00000520265 BICRALQ6AI39 1079 aa13.04□□□□□ -0.32
VEGFA-221ENST00000520265 FAM71E1Q6IPT2 247 aa13.04□□□□□ -0.32
VEGFA-221ENST00000520265 ARHGAP11AQ6P4F7 1023 aa13.04□□□□□ -0.32
VEGFA-221ENST00000520265 LYPD8Q6UX82 237 aa13.04□□□□□ -0.32
VEGFA-221ENST00000520265 RGS9BPQ6ZS82 235 aa13.04□□□□□ -0.32
VEGFA-221ENST00000520265 IKBIPQ70UQ0 350 aa13.04□□□□□ -0.32
VEGFA-221ENST00000520265 EXOC3L1Q86VI1 746 aa13.04□□□□□ -0.32
VEGFA-221ENST00000520265 EID3Q8N140 333 aa13.04□□□□□ -0.32
VEGFA-221ENST00000520265 LIX1Q8N485 282 aa13.04□□□□□ -0.32
VEGFA-221ENST00000520265 FAM109AQ8N4B1 249 aa13.04□□□□□ -0.32
VEGFA-221ENST00000520265 TMEM251Q8N6I4 163 aa13.04□□□□□ -0.32
VEGFA-221ENST00000520265 PAQR8Q8TEZ7 354 aa13.04□□□□□ -0.32
VEGFA-221ENST00000520265 ADIPOR1Q96A54 375 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms