RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 STXBP1P61764 594 aaKnown RBP4.44□□□□□ -1.7
SDCBP-207ENST00000520168 RPP38P78345 283 aaKnown RBP4.44□□□□□ -1.7
SDCBP-207ENST00000520168 OLR1P78380 273 aa4.44□□□□□ -1.7
SDCBP-207ENST00000520168 BIKQ13323 160 aa4.44□□□□□ -1.7
SDCBP-207ENST00000520168 SP140Q13342 867 aa4.44□□□□□ -1.7
SDCBP-207ENST00000520168 SERTAD2Q14140 314 aa4.44□□□□□ -1.7
SDCBP-207ENST00000520168 KCNJ11Q14654 390 aa4.44□□□□□ -1.7
SDCBP-207ENST00000520168 EFTUD2Q15029 972 aaKnown RBP eCLIP4.44□□□□□ -1.7
SDCBP-207ENST00000520168 NRF1Q16656 503 aa4.44□□□□□ -1.7
SDCBP-207ENST00000520168 TMEM249Q2WGJ8 235 aa4.44□□□□□ -1.7
SDCBP-207ENST00000520168 PDLIM3Q53GG5 364 aaPredicted RBP4.44□□□□□ -1.7
SDCBP-207ENST00000520168 PIGGQ5H8A4 983 aa4.44□□□□□ -1.7
SDCBP-207ENST00000520168 CTSL3PQ5NE16 218 aa4.44□□□□□ -1.7
SDCBP-207ENST00000520168 BEND6Q5SZJ8 279 aaPredicted RBP4.44□□□□□ -1.7
SDCBP-207ENST00000520168 TTC19Q6DKK2 380 aaPredicted RBP4.44□□□□□ -1.7
SDCBP-207ENST00000520168 ADAM5Q6NVV9 412 aa4.44□□□□□ -1.7
SDCBP-207ENST00000520168 CASC4Q6P4E1 433 aa4.44□□□□□ -1.7
SDCBP-207ENST00000520168 PPP1R21Q6ZMI0 780 aa4.44□□□□□ -1.7
SDCBP-207ENST00000520168 ADGRE4PQ86SQ3 457 aa4.44□□□□□ -1.7
SDCBP-207ENST00000520168 CA13Q8N1Q1 262 aa4.44□□□□□ -1.7
SDCBP-207ENST00000520168 RFLNBQ8N5W9 214 aa4.44□□□□□ -1.7
SDCBP-207ENST00000520168 LRRC57Q8N9N7 239 aa4.44□□□□□ -1.7
SDCBP-207ENST00000520168 EIF1ADQ8N9N8 165 aaKnown RBP4.44□□□□□ -1.7
SDCBP-207ENST00000520168 C9orf106Q8NAJ2 232 aa4.44□□□□□ -1.7
SDCBP-207ENST00000520168 FAM13CQ8NE31 585 aa4.44□□□□□ -1.7
SDCBP-207ENST00000520168 SPATA4Q8NEY3 305 aa4.44□□□□□ -1.7
SDCBP-207ENST00000520168 FAM76AQ8TAV0 307 aa4.44□□□□□ -1.7
SDCBP-207ENST00000520168 SLC2A12Q8TD20 617 aa4.44□□□□□ -1.7
SDCBP-207ENST00000520168 ZFAND2BQ8WV99 257 aa4.44□□□□□ -1.7
SDCBP-207ENST00000520168 ASB11Q8WXH4 323 aa4.44□□□□□ -1.7
SDCBP-207ENST00000520168 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.44□□□□□ -1.7
SDCBP-207ENST00000520168 KRT35Q92764 455 aa4.44□□□□□ -1.7
SDCBP-207ENST00000520168 FBXW5Q969U6 566 aa4.44□□□□□ -1.7
SDCBP-207ENST00000520168 INTS12Q96CB8 462 aaKnown RBP4.44□□□□□ -1.7
SDCBP-207ENST00000520168 WDYHV1Q96HA8 205 aa4.44□□□□□ -1.7
SDCBP-207ENST00000520168 FAR2Q96K12 515 aa4.44□□□□□ -1.7
SDCBP-207ENST00000520168 JSRP1Q96MG2 331 aaPredicted RBP4.44□□□□□ -1.7
SDCBP-207ENST00000520168 HS6ST2Q96MM7 605 aa4.44□□□□□ -1.7
SDCBP-207ENST00000520168 FAM111AQ96PZ2 611 aa4.44□□□□□ -1.7
SDCBP-207ENST00000520168 TNFRSF13CQ96RJ3 184 aa4.44□□□□□ -1.7
SDCBP-207ENST00000520168 SERINC2Q96SA4 455 aa4.44□□□□□ -1.7
SDCBP-207ENST00000520168 KRT12Q99456 494 aa4.44□□□□□ -1.7
SDCBP-207ENST00000520168 NAP1L3Q99457 506 aaPredicted RBP4.44□□□□□ -1.7
SDCBP-207ENST00000520168 RHOXF2Q9BQY4 288 aa4.44□□□□□ -1.7
SDCBP-207ENST00000520168 RHNO1Q9BSD3 238 aa4.44□□□□□ -1.7
SDCBP-207ENST00000520168 PACSIN1Q9BY11 444 aa4.44□□□□□ -1.7
SDCBP-207ENST00000520168 UGT2B28Q9BY64 529 aa4.44□□□□□ -1.7
SDCBP-207ENST00000520168 KRTAP17-1Q9BYP8 105 aa4.44□□□□□ -1.7
SDCBP-207ENST00000520168 KRTAP4-2Q9BYR5 136 aa4.44□□□□□ -1.7
SDCBP-207ENST00000520168 SLCO5A1Q9H2Y9 848 aa4.44□□□□□ -1.7
SDCBP-207ENST00000520168 ESRP2Q9H6T0 727 aaKnown RBP4.44□□□□□ -1.7
SDCBP-207ENST00000520168 LIN28AQ9H9Z2 209 aaKnown RBP4.44□□□□□ -1.7
SDCBP-207ENST00000520168 PIH1D1Q9NWS0 290 aaKnown RBP4.44□□□□□ -1.7
SDCBP-207ENST00000520168 ZNF446Q9NWS9 450 aa4.44□□□□□ -1.7
SDCBP-207ENST00000520168 KLHL28Q9NXS3 571 aa4.44□□□□□ -1.7
SDCBP-207ENST00000520168 FETUBQ9UGM5 382 aa4.44□□□□□ -1.7
SDCBP-207ENST00000520168 SLC2A6Q9UGQ3 507 aa4.44□□□□□ -1.7
SDCBP-207ENST00000520168 AMFRQ9UKV5 643 aa4.44□□□□□ -1.7
SDCBP-207ENST00000520168 TFR2Q9UP52 801 aa4.44□□□□□ -1.7
SDCBP-207ENST00000520168 LAMP3Q9UQV4 416 aa4.44□□□□□ -1.7
SDCBP-207ENST00000520168 CHCHD2Q9Y6H1 151 aaPredicted RBP4.44□□□□□ -1.7
SDCBP-207ENST00000520168 MGAM2Q2M2H8 2515 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 ROS1P08922 2347 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 A0A1W2PNV4 684 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 FRG2CA6NGY1 282 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 C17orf105B2RV13 164 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 ALG1L2C9J202 215 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 KLF4O43474 513 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 TCF21O43680 179 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 CTNSO60931 367 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 NIPSNAP2O75323 286 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 TNFSF13O75888 250 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 METTL18O95568 372 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 ALDOAP04075 364 aaKnown RBP4.43□□□□□ -1.7
SDCBP-207ENST00000520168 SERPIND1P05546 499 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 C8GP07360 202 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 SERPINA6P08185 405 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 SMIM10L1P0DMW3 83 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 CD8BP10966 210 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 IMPDH2P12268 514 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 CDH1P12830 882 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 SLC25A16P16260 332 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 OGNP20774 298 aaKnown RBP4.43□□□□□ -1.7
SDCBP-207ENST00000520168 FMO4P31512 558 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 FDFT1P37268 417 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 SLC6A12P48065 614 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 KCNJ5P48544 419 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 MASP1P48740 699 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 CLCN7P51798 805 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 MRPS35P82673 323 aaKnown RBP4.43□□□□□ -1.7
SDCBP-207ENST00000520168 GABPB1Q06547 395 aaPredicted RBP4.43□□□□□ -1.7
SDCBP-207ENST00000520168 PCDH1Q08174 1060 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 LOXL1Q08397 574 aaPredicted RBP4.43□□□□□ -1.7
SDCBP-207ENST00000520168 FAM27E3Q08E93 113 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 ASPHQ12797 758 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 STX4Q12846 297 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 FOXF2Q12947 444 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 RPS6KA2Q15349 733 aa4.43□□□□□ -1.7
SDCBP-207ENST00000520168 NTRK2Q16620 822 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms