RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 ZNF597Q96LX8 424 aa11.39□□□□□ -0.59
CSMD1-205ENST00000519623 C16orf45Q96MC5 204 aaPredicted RBP11.39□□□□□ -0.59
CSMD1-205ENST00000519623 RILPQ96NA2 401 aa11.39□□□□□ -0.59
CSMD1-205ENST00000519623 FMO2Q99518 471 aa11.39□□□□□ -0.59
CSMD1-205ENST00000519623 NXF5Q9H1B4 397 aaKnown RBP11.39□□□□□ -0.59
CSMD1-205ENST00000519623 ELOVL6Q9H5J4 265 aa11.39□□□□□ -0.59
CSMD1-205ENST00000519623 BRF2Q9HAW0 419 aa11.39□□□□□ -0.59
CSMD1-205ENST00000519623 MAT2BQ9NZL9 334 aa11.39□□□□□ -0.59
CSMD1-205ENST00000519623 B4GALT7Q9UBV7 327 aa11.39□□□□□ -0.59
CSMD1-205ENST00000519623 SLC12A4Q9UP95 1085 aa11.39□□□□□ -0.59
CSMD1-205ENST00000519623 L3MBTL1Q9Y468 752 aa11.39□□□□□ -0.59
CSMD1-205ENST00000519623 ITPR3Q14573 2671 aa11.38□□□□□ -0.59
CSMD1-205ENST00000519623 ANKHD1Q8IWZ3 2542 aaKnown RBP11.38□□□□□ -0.59
CSMD1-205ENST00000519623 HSPB2A8KAH6 182 aa11.38□□□□□ -0.59
CSMD1-205ENST00000519623 FAM47E-STBD1D6RA91 191 aa11.38□□□□□ -0.59
CSMD1-205ENST00000519623 GUCY1B2O75343 617 aa11.38□□□□□ -0.59
CSMD1-205ENST00000519623 TRAPPC6AO75865 159 aa11.38□□□□□ -0.59
CSMD1-205ENST00000519623 ATP1B1P05026 303 aa11.38□□□□□ -0.59
CSMD1-205ENST00000519623 SNRPAP09012 282 aaKnown RBP11.38□□□□□ -0.59
CSMD1-205ENST00000519623 NAGAP17050 411 aa11.38□□□□□ -0.59
CSMD1-205ENST00000519623 CSNK2A2P19784 350 aaPredicted RBP11.38□□□□□ -0.59
CSMD1-205ENST00000519623 GCAP28676 217 aa11.38□□□□□ -0.59
CSMD1-205ENST00000519623 CEACAM8P31997 349 aaPredicted RBP11.38□□□□□ -0.59
CSMD1-205ENST00000519623 FEN1P39748 380 aaKnown RBP11.38□□□□□ -0.59
CSMD1-205ENST00000519623 NRG3P56975 720 aa11.38□□□□□ -0.59
CSMD1-205ENST00000519623 HSPB2Q16082 182 aa11.38□□□□□ -0.59
CSMD1-205ENST00000519623 UNC50Q53HI1 259 aa11.38□□□□□ -0.59
CSMD1-205ENST00000519623 VASNQ6EMK4 673 aa11.38□□□□□ -0.59
CSMD1-205ENST00000519623 DESI1Q6ICB0 168 aa11.38□□□□□ -0.59
CSMD1-205ENST00000519623 POMZP3Q6PJE2 187 aa11.38□□□□□ -0.59
CSMD1-205ENST00000519623 ARSKQ6UWY0 536 aa11.38□□□□□ -0.59
CSMD1-205ENST00000519623 TIFABQ6ZNK6 161 aa11.38□□□□□ -0.59
CSMD1-205ENST00000519623 TAOK1Q7L7X3 1001 aa11.38□□□□□ -0.59
CSMD1-205ENST00000519623 PACS2Q86VP3 889 aa11.38□□□□□ -0.59
CSMD1-205ENST00000519623 LIX1Q8N485 282 aa11.38□□□□□ -0.59
CSMD1-205ENST00000519623 NAXEQ8NCW5 288 aa11.38□□□□□ -0.59
CSMD1-205ENST00000519623 TNIP2Q8NFZ5 429 aa11.38□□□□□ -0.59
CSMD1-205ENST00000519623 SELENOMQ8WWX9 145 aa11.38□□□□□ -0.59
CSMD1-205ENST00000519623 HGDQ93099 445 aa11.38□□□□□ -0.59
CSMD1-205ENST00000519623 CTHRC1Q96CG8 243 aa11.38□□□□□ -0.59
CSMD1-205ENST00000519623 TMEM41AQ96HV5 264 aa11.38□□□□□ -0.59
CSMD1-205ENST00000519623 ZNF681Q96N22 645 aa11.38□□□□□ -0.59
CSMD1-205ENST00000519623 SLC24A3Q9HC58 644 aa11.38□□□□□ -0.59
CSMD1-205ENST00000519623 SNX6Q9UNH7 406 aa11.38□□□□□ -0.59
CSMD1-205ENST00000519623 C15orf41Q9Y2V0 281 aa11.38□□□□□ -0.59
CSMD1-205ENST00000519623 KIAA1549Q9HCM3 1950 aa11.37□□□□□ -0.59
CSMD1-205ENST00000519623 A0A087WUV0 522 aaPredicted RBP11.37□□□□□ -0.59
CSMD1-205ENST00000519623 C15orf38-AP3S2A0A0A6YYH1 394 aa11.37□□□□□ -0.59
CSMD1-205ENST00000519623 MANBAO00462 879 aa11.37□□□□□ -0.59
CSMD1-205ENST00000519623 ERAL1O75616 437 aaKnown RBP11.37□□□□□ -0.59
CSMD1-205ENST00000519623 PPM1BO75688 479 aa11.37□□□□□ -0.59
CSMD1-205ENST00000519623 OR4F21O95013 312 aa11.37□□□□□ -0.59
CSMD1-205ENST00000519623 CBX7O95931 251 aa11.37□□□□□ -0.59
CSMD1-205ENST00000519623 TIMP3P35625 211 aa11.37□□□□□ -0.59
CSMD1-205ENST00000519623 DEKP35659 375 aaKnown RBP11.37□□□□□ -0.59
CSMD1-205ENST00000519623 TMED10P49755 219 aaKnown RBP11.37□□□□□ -0.59
CSMD1-205ENST00000519623 WNT3P56703 355 aa11.37□□□□□ -0.59
CSMD1-205ENST00000519623 TRA2BP62995 288 aaKnown RBP11.37□□□□□ -0.59
CSMD1-205ENST00000519623 CLCQ05315 142 aa11.37□□□□□ -0.59
CSMD1-205ENST00000519623 MYBPHQ13203 477 aa11.37□□□□□ -0.59
CSMD1-205ENST00000519623 SNTB1Q13884 538 aaKnown RBP11.37□□□□□ -0.59
CSMD1-205ENST00000519623 EXOSC7Q15024 291 aaKnown RBP11.37□□□□□ -0.59
CSMD1-205ENST00000519623 ACSF3Q4G176 576 aaPredicted RBP11.37□□□□□ -0.59
CSMD1-205ENST00000519623 GLE1Q53GS7 698 aaKnown RBP11.37□□□□□ -0.59
CSMD1-205ENST00000519623 TRMT12Q53H54 448 aaKnown RBP11.37□□□□□ -0.59
CSMD1-205ENST00000519623 EIPR1Q53HC9 387 aa11.37□□□□□ -0.59
CSMD1-205ENST00000519623 NHSL2Q5HYW2 709 aa11.37□□□□□ -0.59
CSMD1-205ENST00000519623 TCHHL1Q5QJ38 904 aaPredicted RBP11.37□□□□□ -0.59
CSMD1-205ENST00000519623 TIGD3Q6B0B8 471 aa11.37□□□□□ -0.59
CSMD1-205ENST00000519623 FAM180BQ6P0A1 224 aa11.37□□□□□ -0.59
CSMD1-205ENST00000519623 TMEM81Q6P7N7 255 aa11.37□□□□□ -0.59
CSMD1-205ENST00000519623 NUP54Q7Z3B4 507 aa11.37□□□□□ -0.59
CSMD1-205ENST00000519623 WDR53Q7Z5U6 358 aaPredicted RBP11.37□□□□□ -0.59
CSMD1-205ENST00000519623 VWA5B2Q8N398 1253 aa11.37□□□□□ -0.59
CSMD1-205ENST00000519623 C1orf52Q8N6N3 182 aaKnown RBP11.37□□□□□ -0.59
CSMD1-205ENST00000519623 RELL2Q8NC24 303 aaPredicted RBP11.37□□□□□ -0.59
CSMD1-205ENST00000519623 ADCY4Q8NFM4 1077 aa11.37□□□□□ -0.59
CSMD1-205ENST00000519623 NRGNQ92686 78 aa11.37□□□□□ -0.59
CSMD1-205ENST00000519623 CNRIP1Q96F85 164 aaPredicted RBP11.37□□□□□ -0.59
CSMD1-205ENST00000519623 HBEGFQ99075 208 aa11.37□□□□□ -0.59
CSMD1-205ENST00000519623 BRINP2Q9C0B6 783 aa11.37□□□□□ -0.59
CSMD1-205ENST00000519623 PRDM14Q9GZV8 571 aa11.37□□□□□ -0.59
CSMD1-205ENST00000519623 NMRK1Q9NWW6 199 aa11.37□□□□□ -0.59
CSMD1-205ENST00000519623 TMEM216Q9P0N5 145 aa11.37□□□□□ -0.59
CSMD1-205ENST00000519623 HEY2Q9UBP5 337 aa11.37□□□□□ -0.59
CSMD1-205ENST00000519623 VPS29Q9UBQ0 182 aa11.37□□□□□ -0.59
CSMD1-205ENST00000519623 TRPS1Q9UHF7 1281 aa11.37□□□□□ -0.59
CSMD1-205ENST00000519623 PSME2Q9UL46 239 aa11.37□□□□□ -0.59
CSMD1-205ENST00000519623 CFL2Q9Y281 166 aa11.37□□□□□ -0.59
CSMD1-205ENST00000519623 SLC6A5Q9Y345 797 aa11.37□□□□□ -0.59
CSMD1-205ENST00000519623 MAP1AP78559 2803 aaPredicted RBP11.37□□□□□ -0.59
CSMD1-205ENST00000519623 PRRC2AP48634 2157 aaKnown RBP11.37□□□□□ -0.59
CSMD1-205ENST00000519623 FAM221AA4D161 298 aa11.36□□□□□ -0.59
CSMD1-205ENST00000519623 GOLGA6L10A6NI86 522 aa11.36□□□□□ -0.59
CSMD1-205ENST00000519623 GNB5O14775 395 aa11.36□□□□□ -0.59
CSMD1-205ENST00000519623 DLX3O60479 287 aa11.36□□□□□ -0.59
CSMD1-205ENST00000519623 ICOSLGO75144 302 aa11.36□□□□□ -0.59
CSMD1-205ENST00000519623 CTAG2O75638 210 aa11.36□□□□□ -0.59
CSMD1-205ENST00000519623 CHN1P15882 459 aa11.36□□□□□ -0.59
CSMD1-205ENST00000519623 BMP7P18075 431 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms