RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 SFXN5Q8TD22 340 aa13.59□□□□□ -0.23
CLN8-204ENST00000519254 CSF3RQ99062 836 aa13.59□□□□□ -0.23
CLN8-204ENST00000519254 CUTCQ9NTM9 273 aa13.59□□□□□ -0.23
CLN8-204ENST00000519254 OCIAD1Q9NX40 245 aa13.59□□□□□ -0.23
CLN8-204ENST00000519254 CLCA2Q9UQC9 943 aa13.59□□□□□ -0.23
CLN8-204ENST00000519254 FITM1A5D6W6 292 aa13.58□□□□□ -0.23
CLN8-204ENST00000519254 EFCAB7A8K855 629 aa13.58□□□□□ -0.23
CLN8-204ENST00000519254 PROB1E7EW31 1015 aa13.58□□□□□ -0.23
CLN8-204ENST00000519254 ALAS2P22557 587 aa13.58□□□□□ -0.23
CLN8-204ENST00000519254 PRKACGP22612 351 aa13.58□□□□□ -0.23
CLN8-204ENST00000519254 MYF6P23409 242 aa13.58□□□□□ -0.23
CLN8-204ENST00000519254 BUD31P41223 144 aaPredicted RBP13.58□□□□□ -0.23
CLN8-204ENST00000519254 ADARB1P78563 741 aaKnown RBP13.58□□□□□ -0.23
CLN8-204ENST00000519254 ZFP36L1Q07352 338 aaKnown RBP13.58□□□□□ -0.23
CLN8-204ENST00000519254 PIP4P1Q86T03 277 aa13.58□□□□□ -0.23
CLN8-204ENST00000519254 MMABQ96EY8 250 aaPredicted RBP13.58□□□□□ -0.23
CLN8-204ENST00000519254 SLC35G5Q96KT7 338 aa13.58□□□□□ -0.23
CLN8-204ENST00000519254 NDC1Q9BTX1 674 aa13.58□□□□□ -0.23
CLN8-204ENST00000519254 SOX17Q9H6I2 414 aaPredicted RBP13.58□□□□□ -0.23
CLN8-204ENST00000519254 LYRM4Q9HD34 91 aa13.58□□□□□ -0.23
CLN8-204ENST00000519254 SEMA3GQ9NS98 782 aa13.58□□□□□ -0.23
CLN8-204ENST00000519254 ZCCHC3Q9NUD5 404 aaKnown RBP13.58□□□□□ -0.23
CLN8-204ENST00000519254 GIMAP4Q9NUV9 329 aa13.58□□□□□ -0.23
CLN8-204ENST00000519254 USE1Q9NZ43 259 aa13.58□□□□□ -0.23
CLN8-204ENST00000519254 HCN3Q9P1Z3 774 aa13.58□□□□□ -0.23
CLN8-204ENST00000519254 DHCR7Q9UBM7 475 aaKnown RBP13.58□□□□□ -0.23
CLN8-204ENST00000519254 PSME2Q9UL46 239 aa13.58□□□□□ -0.23
CLN8-204ENST00000519254 PADI2Q9Y2J8 665 aa13.58□□□□□ -0.23
CLN8-204ENST00000519254 U3KQV3 271 aa13.58□□□□□ -0.23
CLN8-204ENST00000519254 PRAMEF27A3QJZ7 478 aa13.58□□□□□ -0.24
CLN8-204ENST00000519254 PRAMEF25A6NGN4 478 aa13.58□□□□□ -0.24
CLN8-204ENST00000519254 H3BMH7 237 aa13.58□□□□□ -0.24
CLN8-204ENST00000519254 ZNF749O43361 778 aa13.58□□□□□ -0.24
CLN8-204ENST00000519254 FOXS1O43638 330 aa13.58□□□□□ -0.24
CLN8-204ENST00000519254 E2F6O75461 281 aa13.58□□□□□ -0.24
CLN8-204ENST00000519254 BCHEP06276 602 aa13.58□□□□□ -0.24
CLN8-204ENST00000519254 MSL3P1P0C860 447 aa13.58□□□□□ -0.24
CLN8-204ENST00000519254 MPIP34949 423 aa13.58□□□□□ -0.24
CLN8-204ENST00000519254 CAPGP40121 348 aa13.58□□□□□ -0.24
CLN8-204ENST00000519254 SHC2P98077 582 aa13.58□□□□□ -0.24
CLN8-204ENST00000519254 INSM1Q01101 510 aaPredicted RBP13.58□□□□□ -0.24
CLN8-204ENST00000519254 TRA2AQ13595 282 aaKnown RBP eCLIP13.58□□□□□ -0.24
CLN8-204ENST00000519254 RPS26P11Q5JNZ5 115 aaPredicted RBP13.58□□□□□ -0.24
CLN8-204ENST00000519254 GARNL3Q5VVW2 1013 aa13.58□□□□□ -0.24
CLN8-204ENST00000519254 SHQ1Q6PI26 577 aaKnown RBP13.58□□□□□ -0.24
CLN8-204ENST00000519254 TMEM107Q6UX40 140 aa13.58□□□□□ -0.24
CLN8-204ENST00000519254 PATL1Q86TB9 770 aaKnown RBP13.58□□□□□ -0.24
CLN8-204ENST00000519254 CA13Q8N1Q1 262 aa13.58□□□□□ -0.24
CLN8-204ENST00000519254 AGBL5Q8NDL9 886 aa13.58□□□□□ -0.24
CLN8-204ENST00000519254 CYGBQ8WWM9 190 aa13.58□□□□□ -0.24
CLN8-204ENST00000519254 SDCCAG3Q96C92 435 aa13.58□□□□□ -0.24
CLN8-204ENST00000519254 TMEM19Q96HH6 336 aa13.58□□□□□ -0.24
CLN8-204ENST00000519254 MAGED4Q96JG8 741 aa13.58□□□□□ -0.24
CLN8-204ENST00000519254 BARD1Q99728 777 aaKnown RBP13.58□□□□□ -0.24
CLN8-204ENST00000519254 CTRCQ99895 268 aa13.58□□□□□ -0.24
CLN8-204ENST00000519254 RSPO3Q9BXY4 272 aaPredicted RBP13.58□□□□□ -0.24
CLN8-204ENST00000519254 RBCK1Q9BYM8 510 aa13.58□□□□□ -0.24
CLN8-204ENST00000519254 SLC7A5P2Q9GIP4 190 aa13.58□□□□□ -0.24
CLN8-204ENST00000519254 OR51I1Q9H343 314 aa13.58□□□□□ -0.24
CLN8-204ENST00000519254 SIDT1Q9NXL6 827 aaKnown RBP13.58□□□□□ -0.24
CLN8-204ENST00000519254 RARRES3Q9UL19 164 aa13.58□□□□□ -0.24
CLN8-204ENST00000519254 ZNF780BQ9Y6R6 833 aa13.58□□□□□ -0.24
CLN8-204ENST00000519254 MAU2Q9Y6X3 613 aa13.58□□□□□ -0.24
CLN8-204ENST00000519254 SPEGQ15772 3267 aa13.57□□□□□ -0.24
CLN8-204ENST00000519254 DPM1O60762 260 aa13.57□□□□□ -0.24
CLN8-204ENST00000519254 IFNA14P01570 189 aa13.57□□□□□ -0.24
CLN8-204ENST00000519254 OR12D1P0DN82 309 aa13.57□□□□□ -0.24
CLN8-204ENST00000519254 THRBP10828 461 aa13.57□□□□□ -0.24
CLN8-204ENST00000519254 TNFRSF1BP20333 461 aa13.57□□□□□ -0.24
CLN8-204ENST00000519254 AVPR1BP47901 424 aa13.57□□□□□ -0.24
CLN8-204ENST00000519254 CLCN2P51788 898 aa13.57□□□□□ -0.24
CLN8-204ENST00000519254 SKP1P63208 163 aa13.57□□□□□ -0.24
CLN8-204ENST00000519254 SIM1P81133 766 aaPredicted RBP13.57□□□□□ -0.24
CLN8-204ENST00000519254 MAT1AQ00266 395 aaKnown RBP13.57□□□□□ -0.24
CLN8-204ENST00000519254 E2F1Q01094 437 aa13.57□□□□□ -0.24
CLN8-204ENST00000519254 NHLH1Q02575 133 aa13.57□□□□□ -0.24
CLN8-204ENST00000519254 ILKQ13418 452 aa13.57□□□□□ -0.24
CLN8-204ENST00000519254 FAM53BQ14153 422 aa13.57□□□□□ -0.24
CLN8-204ENST00000519254 FAM214AQ32MH5 1076 aa13.57□□□□□ -0.24
CLN8-204ENST00000519254 ZIK1Q3SY52 487 aaPredicted RBP13.57□□□□□ -0.24
CLN8-204ENST00000519254 DHRS13Q6UX07 377 aa13.57□□□□□ -0.24
CLN8-204ENST00000519254 USP51Q70EK9 711 aa13.57□□□□□ -0.24
CLN8-204ENST00000519254 SZRD1Q7Z422 152 aa13.57□□□□□ -0.24
CLN8-204ENST00000519254 HIPK1Q86Z02 1210 aa13.57□□□□□ -0.24
CLN8-204ENST00000519254 OR5D16Q8NGK9 328 aa13.57□□□□□ -0.24
CLN8-204ENST00000519254 OR9A2Q8NGT5 310 aa13.57□□□□□ -0.24
CLN8-204ENST00000519254 ELP4Q96EB1 424 aa13.57□□□□□ -0.24
CLN8-204ENST00000519254 FBXL20Q96IG2 436 aa13.57□□□□□ -0.24
CLN8-204ENST00000519254 RBM4BQ9BQ04 359 aaKnown RBP13.57□□□□□ -0.24
CLN8-204ENST00000519254 RBM4Q9BWF3 364 aaKnown RBP13.57□□□□□ -0.24
CLN8-204ENST00000519254 ZNF696Q9H7X3 374 aa13.57□□□□□ -0.24
CLN8-204ENST00000519254 APMAPQ9HDC9 416 aa13.57□□□□□ -0.24
CLN8-204ENST00000519254 PRDM9Q9NQV7 894 aa13.57□□□□□ -0.24
CLN8-204ENST00000519254 TOR4AQ9NXH8 423 aa13.57□□□□□ -0.24
CLN8-204ENST00000519254 MS4A12Q9NXJ0 267 aa13.57□□□□□ -0.24
CLN8-204ENST00000519254 BAG5Q9UL15 447 aa13.57□□□□□ -0.24
CLN8-204ENST00000519254 MYOCOSA0A1B0GUC4 107 aa13.56□□□□□ -0.24
CLN8-204ENST00000519254 EMC8O43402 210 aa13.56□□□□□ -0.24
CLN8-204ENST00000519254 TNFAIP8O95379 198 aa13.56□□□□□ -0.24
CLN8-204ENST00000519254 PGM3O95394 542 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms