RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 C7orf57Q8NEG2 295 aa12.26□□□□□ -0.45
VEGFA-219ENST00000518824 CLHC1Q8NHS4 586 aa12.26□□□□□ -0.45
VEGFA-219ENST00000518824 SLC22A8Q8TCC7 542 aa12.26□□□□□ -0.45
VEGFA-219ENST00000518824 FCRL1Q96LA6 429 aa12.26□□□□□ -0.45
VEGFA-219ENST00000518824 TRMOQ9BU70 441 aa12.26□□□□□ -0.45
VEGFA-219ENST00000518824 DEFB127Q9H1M4 99 aa12.26□□□□□ -0.45
VEGFA-219ENST00000518824 MYNNQ9NPC7 610 aa12.26□□□□□ -0.45
VEGFA-219ENST00000518824 RRAGDQ9NQL2 400 aaPredicted RBP12.26□□□□□ -0.45
VEGFA-219ENST00000518824 PFDN4Q9NQP4 134 aa12.26□□□□□ -0.45
VEGFA-219ENST00000518824 SLC35C2Q9NQQ7 365 aa12.26□□□□□ -0.45
VEGFA-219ENST00000518824 BCAP29Q9UHQ4 241 aa12.26□□□□□ -0.45
VEGFA-219ENST00000518824 BAIAP2L1Q9UHR4 511 aa12.26□□□□□ -0.45
VEGFA-219ENST00000518824 HRH3Q9Y5N1 445 aa12.26□□□□□ -0.45
VEGFA-219ENST00000518824 LIPGQ9Y5X9 500 aa12.26□□□□□ -0.45
VEGFA-219ENST00000518824 CHCHD2Q9Y6H1 151 aaPredicted RBP12.26□□□□□ -0.45
VEGFA-219ENST00000518824 ZNF780BQ9Y6R6 833 aa12.26□□□□□ -0.45
VEGFA-219ENST00000518824 ZNF407Q9C0G0 2248 aa12.26□□□□□ -0.45
VEGFA-219ENST00000518824 TRGV8A0A0C4DH27 118 aa12.25□□□□□ -0.45
VEGFA-219ENST00000518824 ATP6AP2A0A1C7CYW4 349 aa12.25□□□□□ -0.45
VEGFA-219ENST00000518824 NPIPB8E9PQR5 432 aa12.25□□□□□ -0.45
VEGFA-219ENST00000518824 SLC28A1O00337 649 aa12.25□□□□□ -0.45
VEGFA-219ENST00000518824 LSM1O15116 133 aaKnown RBP12.25□□□□□ -0.45
VEGFA-219ENST00000518824 SLC19A2O60779 497 aa12.25□□□□□ -0.45
VEGFA-219ENST00000518824 ZG16O60844 167 aa12.25□□□□□ -0.45
VEGFA-219ENST00000518824 SKAP2O75563 359 aaPredicted RBP12.25□□□□□ -0.45
VEGFA-219ENST00000518824 ATP6AP2O75787 350 aa12.25□□□□□ -0.45
VEGFA-219ENST00000518824 CELA3AP09093 270 aa12.25□□□□□ -0.45
VEGFA-219ENST00000518824 SDC1P18827 310 aa12.25□□□□□ -0.45
VEGFA-219ENST00000518824 DDCP20711 480 aa12.25□□□□□ -0.45
VEGFA-219ENST00000518824 CNR1P21554 472 aa12.25□□□□□ -0.45
VEGFA-219ENST00000518824 COL8A1P27658 744 aa12.25□□□□□ -0.45
VEGFA-219ENST00000518824 RPL38P63173 70 aaKnown RBP12.25□□□□□ -0.45
VEGFA-219ENST00000518824 CEBPEQ15744 281 aa12.25□□□□□ -0.45
VEGFA-219ENST00000518824 CHI3L2Q15782 390 aa12.25□□□□□ -0.45
VEGFA-219ENST00000518824 GALNTL6Q49A17 601 aa12.25□□□□□ -0.45
VEGFA-219ENST00000518824 C3P1Q6ZMU1 363 aa12.25□□□□□ -0.45
VEGFA-219ENST00000518824 FAM47EQ6ZV65 393 aa12.25□□□□□ -0.45
VEGFA-219ENST00000518824 NUDCD3Q8IVD9 361 aa12.25□□□□□ -0.45
VEGFA-219ENST00000518824 DDIASQ8IXT1 998 aa12.25□□□□□ -0.45
VEGFA-219ENST00000518824 CLYBLQ8N0X4 340 aa12.25□□□□□ -0.45
VEGFA-219ENST00000518824 GOLM1Q8NBJ4 401 aa12.25□□□□□ -0.45
VEGFA-219ENST00000518824 FAM13CQ8NE31 585 aa12.25□□□□□ -0.45
VEGFA-219ENST00000518824 OR7G2Q8NG99 324 aa12.25□□□□□ -0.45
VEGFA-219ENST00000518824 OR7G1Q8NGA0 311 aa12.25□□□□□ -0.45
VEGFA-219ENST00000518824 PAQR8Q8TEZ7 354 aa12.25□□□□□ -0.45
VEGFA-219ENST00000518824 TSSK3Q96PN8 268 aa12.25□□□□□ -0.45
VEGFA-219ENST00000518824 TTTY12Q9BZ98 90 aa12.25□□□□□ -0.45
VEGFA-219ENST00000518824 SACM1LQ9NTJ5 587 aa12.25□□□□□ -0.45
VEGFA-219ENST00000518824 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.25□□□□□ -0.458e-10■■□□□ 11.6
VEGFA-219ENST00000518824 C1orf109Q9NX04 203 aa12.25□□□□□ -0.45
VEGFA-219ENST00000518824 EHD3Q9NZN3 535 aa12.25□□□□□ -0.45
VEGFA-219ENST00000518824 SENP1Q9P0U3 644 aa12.25□□□□□ -0.45
VEGFA-219ENST00000518824 CNOT11Q9UKZ1 510 aaKnown RBP12.25□□□□□ -0.45
VEGFA-219ENST00000518824 PSME2Q9UL46 239 aa12.25□□□□□ -0.45
VEGFA-219ENST00000518824 ZNF835Q9Y2P0 537 aa12.25□□□□□ -0.45
VEGFA-219ENST00000518824 SPTAN1Q13813 2472 aaKnown RBP12.25□□□□□ -0.45
VEGFA-219ENST00000518824 A0A1B0GTH9 108 aa12.24□□□□□ -0.45
VEGFA-219ENST00000518824 MYO1GB0I1T2 1018 aa12.24□□□□□ -0.45
VEGFA-219ENST00000518824 TFECO14948 347 aaPredicted RBP12.24□□□□□ -0.45
VEGFA-219ENST00000518824 RGS14O43566 566 aa12.24□□□□□ -0.45
VEGFA-219ENST00000518824 AKAP10O43572 662 aa12.24□□□□□ -0.45
VEGFA-219ENST00000518824 CDC40O60508 579 aaKnown RBP eCLIP12.24□□□□□ -0.452e-13■■□□□ 11.5
VEGFA-219ENST00000518824 GLSO94925 669 aaPredicted RBP12.24□□□□□ -0.45
VEGFA-219ENST00000518824 FREM3P0C091 2139 aa12.24□□□□□ -0.45
VEGFA-219ENST00000518824 RFPL3SP0C7P2 107 aa12.24□□□□□ -0.45
VEGFA-219ENST00000518824 BGNP21810 368 aa12.24□□□□□ -0.45
VEGFA-219ENST00000518824 CA7P43166 264 aa12.24□□□□□ -0.45
VEGFA-219ENST00000518824 MAGEA5P43359 124 aa12.24□□□□□ -0.45
VEGFA-219ENST00000518824 PPIAP62937 165 aaKnown RBP12.24□□□□□ -0.45
VEGFA-219ENST00000518824 PLGLB1Q02325 96 aa12.24□□□□□ -0.45
VEGFA-219ENST00000518824 HEPACAMQ14CZ8 416 aa12.24□□□□□ -0.45
VEGFA-219ENST00000518824 NTRK2Q16620 822 aa12.24□□□□□ -0.45
VEGFA-219ENST00000518824 KRTCAP3Q53RY4 240 aa12.24□□□□□ -0.45
VEGFA-219ENST00000518824 XKR7Q5GH72 579 aa12.24□□□□□ -0.45
VEGFA-219ENST00000518824 SLC22A10Q63ZE4 541 aa12.24□□□□□ -0.45
VEGFA-219ENST00000518824 LRIG3Q6UXM1 1119 aa12.24□□□□□ -0.45
VEGFA-219ENST00000518824 NPSR1Q6W5P4 371 aa12.24□□□□□ -0.45
VEGFA-219ENST00000518824 RNF165Q6ZSG1 346 aa12.24□□□□□ -0.45
VEGFA-219ENST00000518824 SPPL2CQ8IUH8 684 aa12.24□□□□□ -0.45
VEGFA-219ENST00000518824 SLC15A4Q8N697 577 aa12.24□□□□□ -0.45
VEGFA-219ENST00000518824 TMEM251Q8N6I4 163 aa12.24□□□□□ -0.45
VEGFA-219ENST00000518824 POGLUT1Q8NBL1 392 aa12.24□□□□□ -0.45
VEGFA-219ENST00000518824 ZNF675Q8TD23 568 aa12.24□□□□□ -0.45
VEGFA-219ENST00000518824 TP53INP1Q96A56 240 aa12.24□□□□□ -0.45
VEGFA-219ENST00000518824 CIDECQ96AQ7 238 aaPredicted RBP12.24□□□□□ -0.45
VEGFA-219ENST00000518824 SGCZQ96LD1 299 aa12.24□□□□□ -0.45
VEGFA-219ENST00000518824 GLIPR2Q9H4G4 154 aa12.24□□□□□ -0.45
VEGFA-219ENST00000518824 KCNK9Q9NPC2 374 aa12.24□□□□□ -0.45
VEGFA-219ENST00000518824 TNFRSF10DQ9UBN6 386 aa12.24□□□□□ -0.45
VEGFA-219ENST00000518824 NPFFR2Q9Y5X5 522 aa12.24□□□□□ -0.45
VEGFA-219ENST00000518824 LRRC3CA6NJW4 275 aa12.23□□□□□ -0.45
VEGFA-219ENST00000518824 P04436 131 aa12.23□□□□□ -0.45
VEGFA-219ENST00000518824 TUBBP07437 444 aa12.23□□□□□ -0.45
VEGFA-219ENST00000518824 EFNA1P20827 205 aaPredicted RBP12.23□□□□□ -0.45
VEGFA-219ENST00000518824 ABCD3P28288 659 aa12.23□□□□□ -0.45
VEGFA-219ENST00000518824 WDR4P57081 412 aaKnown RBP12.23□□□□□ -0.45
VEGFA-219ENST00000518824 CORO7P57737 925 aa12.23□□□□□ -0.45
VEGFA-219ENST00000518824 C6orf163Q5TEZ5 329 aa12.23□□□□□ -0.45
VEGFA-219ENST00000518824 HLA-DQA1Q5Y7H0 255 aa12.23□□□□□ -0.45
VEGFA-219ENST00000518824 Q6ZPB1 254 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms