RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 PLOD3O60568 738 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 DPM1O60762 260 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 SHOX2O60902 331 aaPredicted RBP5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 ERN1O75460 977 aaKnown RBP5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 GMNNO75496 209 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 REM1O75628 298 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 KRT34O76011 436 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 DDAH2O95865 285 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 IFI6P09912 130 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 ITGAMP11215 1152 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 ESRRAP11474 423 aaPredicted RBP5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 HPGDP15428 266 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 ATP6V1C1P21283 382 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 SSTR4P31391 388 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 PTGER1P34995 402 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 MC3RP41968 323 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 RFX3P48380 749 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 MRPL19P49406 292 aaKnown RBP5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 KHKP50053 298 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 CDK9P50750 372 aaKnown RBP5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 NR0B1P51843 470 aaKnown RBP5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 RNF4P78317 190 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 MRPS35P82673 323 aaKnown RBP5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 TXNL4AP83876 142 aaKnown RBP5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 FUT7Q11130 342 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 KCNAB2Q13303 367 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 UBAP2LQ14157 1087 aaKnown RBP5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 GNA13Q14344 377 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 MYBPC3Q14896 1274 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 EXOSC7Q15024 291 aaKnown RBP5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 LTB4RQ15722 352 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 TBR1Q16650 682 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 PRICKLE4Q2TBC4 344 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 COL28A1Q2UY09 1125 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 TRMT12Q53H54 448 aaKnown RBP5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 ZNF385BQ569K4 471 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 ACER2Q5QJU3 275 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 CGB2Q6NT52 195 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 ZCCHC12Q6PEW1 402 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 BLOC1S3Q6QNY0 202 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 DNAJC14Q6Y2X3 702 aaPredicted RBP5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 TMEM64Q6YI46 380 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 LINC00696Q6ZRV3 163 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 GK5Q6ZS86 529 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 C16orf62Q7Z3J2 963 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 C6orf120Q7Z4R8 191 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 PIGWQ7Z7B1 504 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 SNX32Q86XE0 403 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 HPS6Q86YV9 775 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 APLFQ8IW19 511 aaPredicted RBP5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 SLC44A2Q8IWA5 706 aaPredicted RBP5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 DND1Q8IYX4 353 aaKnown RBP5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 SLC15A4Q8N697 577 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 COX18Q8N8Q8 333 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 CDRT4Q8N9R6 151 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 OR9I1Q8NGQ6 314 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 OR8K3Q8NH51 312 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 RP9Q8TA86 221 aaKnown RBP5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 C9orf43Q8TAL5 461 aaPredicted RBP5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 SFXN5Q8TD22 340 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 BRIX1Q8TDN6 353 aaKnown RBP5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 ADAMTS17Q8TE56 1095 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 EXTL1Q92935 676 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 VPS33AQ96AX1 596 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 ELP4Q96EB1 424 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 DTNBP1Q96EV8 351 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 HSPBAP1Q96EW2 488 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 LCORQ96JN0 433 aaPredicted RBP5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 C5orf34Q96MH7 638 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 ZNF681Q96N22 645 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 CCDC115Q96NT0 180 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 MS4A4EQ96PG1 132 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 LMF1Q96S06 567 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 UTP23Q9BRU9 249 aaKnown RBP5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 SLC35A5Q9BS91 424 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 THUMPD3Q9BV44 507 aaKnown RBP5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 NUDT9Q9BW91 350 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 TRIM45Q9H8W5 580 aaPredicted RBP5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 EFCAB1Q9HAE3 211 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 IL1RL2Q9HB29 575 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 HHATLQ9HCP6 504 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 SAR1AQ9NR31 198 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 HPF1Q9NWY4 346 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 THUMPD1Q9NXG2 353 aaKnown RBP5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 NDE1Q9NXR1 346 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 MAT2BQ9NZL9 334 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 C19orf53Q9UNZ5 99 aaPredicted RBP5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 YARS2Q9Y2Z4 477 aaKnown RBP5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 L3MBTL1Q9Y468 752 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 PCDHGB7Q9Y5F8 929 aa5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 HEMK1Q9Y5R4 338 aaPredicted RBP5.07□□□□□ -1.6
SCARNA16.4-201ENST00000516956 NCOR2Q9Y618 2525 aa5.06□□□□□ -1.6
SCARNA16.4-201ENST00000516956 AKAP13Q12802 2813 aa5.06□□□□□ -1.6
SCARNA16.4-201ENST00000516956 A0A096LPI6 279 aa5.06□□□□□ -1.6
SCARNA16.4-201ENST00000516956 C15orf38-AP3S2A0A0A6YYH1 394 aa5.06□□□□□ -1.6
SCARNA16.4-201ENST00000516956 A0A1W2PQ72 361 aa5.06□□□□□ -1.6
SCARNA16.4-201ENST00000516956 TGFBR3LH3BV60 316 aa5.06□□□□□ -1.6
SCARNA16.4-201ENST00000516956 CDK2AP1O14519 115 aa5.06□□□□□ -1.6
SCARNA16.4-201ENST00000516956 MRASO14807 208 aa5.06□□□□□ -1.6
SCARNA16.4-201ENST00000516956 AIM2O14862 343 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms