RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 VIPR1P32241 457 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 ATXN7L3Q14CW9 347 aaPredicted RBP10.72□□□□□ -0.69
TCOF1-211ENST00000513346 TRAM2Q15035 370 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 CTF1Q16619 201 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 CATSPEREQ5SY80 951 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 PSAPL1Q6NUJ1 521 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 JAZF1Q86VZ6 243 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 GID4Q8IVV7 300 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 MAL2Q969L2 176 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 S100PBPQ96BU1 408 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 ZNF416Q9BWM5 594 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 NEUROD4Q9HD90 331 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 TEX10Q9NXF1 929 aaPredicted RBP10.72□□□□□ -0.69
TCOF1-211ENST00000513346 TMPRSS11EQ9UL52 423 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 HEBP2Q9Y5Z4 205 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 A0A0D9SEW6 157 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 ARPC5O15511 151 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 LRRTM2O43300 516 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 RLN2P04090 185 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 ETFAP13804 333 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 ZNF3P17036 446 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 HLA-DMAP28067 261 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 PGDP52209 483 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 HK3P52790 923 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 MLLT10P55197 1068 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 RPS13P62277 151 aaKnown RBP10.72□□□□□ -0.69
TCOF1-211ENST00000513346 LRRC32Q14392 662 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 LIPJQ5W064 366 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 QSOX2Q6ZRP7 698 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 RBPMSQ93062 196 aaKnown RBP10.72□□□□□ -0.69
TCOF1-211ENST00000513346 RHBDF1Q96CC6 855 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 MBOAT4Q96T53 435 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 SCP2D1Q9UJQ7 156 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 OSGIN1Q9UJX0 560 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 ZNF30P17039 623 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 JUNDP17535 347 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 CD6P30203 668 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 TPMTP51580 245 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 RAB8AP61006 207 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 GK2Q14410 553 aaPredicted RBP10.72□□□□□ -0.69
TCOF1-211ENST00000513346 C18orf21Q32NC0 220 aaPredicted RBP10.72□□□□□ -0.69
TCOF1-211ENST00000513346 FRMPD2BQ6IN97 320 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 Q6ZPB1 254 aaPredicted RBP10.72□□□□□ -0.69
TCOF1-211ENST00000513346 ARMC10Q8N2F6 343 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 SDR16C5Q8N3Y7 309 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 OR8K3Q8NH51 312 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 TCEAL3Q969E4 200 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 RAB11FIP5Q9BXF6 653 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 ELOVL2Q9NXB9 296 aa10.72□□□□□ -0.69
TCOF1-211ENST00000513346 NARSO43776 548 aaKnown RBP10.71□□□□□ -0.69
TCOF1-211ENST00000513346 RBBP9O75884 186 aa10.71□□□□□ -0.69
TCOF1-211ENST00000513346 KRT33AO76009 404 aa10.71□□□□□ -0.69
TCOF1-211ENST00000513346 PRH1P02810 166 aa10.71□□□□□ -0.69
TCOF1-211ENST00000513346 HNRNPA1P09651 372 aaKnown RBP eCLIP10.71□□□□□ -0.69
TCOF1-211ENST00000513346 UQCRC2P22695 453 aa10.71□□□□□ -0.69
TCOF1-211ENST00000513346 RING1Q06587 406 aa10.71□□□□□ -0.69
TCOF1-211ENST00000513346 NDUFAF5Q5TEU4 345 aa10.71□□□□□ -0.69
TCOF1-211ENST00000513346 ZNF776Q68DI1 518 aaPredicted RBP10.71□□□□□ -0.69
TCOF1-211ENST00000513346 ENTHD1Q8IYW4 607 aa10.71□□□□□ -0.69
TCOF1-211ENST00000513346 CLDN22Q8N7P3 220 aa10.71□□□□□ -0.69
TCOF1-211ENST00000513346 ZNF563Q8TA94 476 aa10.71□□□□□ -0.69
TCOF1-211ENST00000513346 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.71□□□□□ -0.69
TCOF1-211ENST00000513346 RAB8BQ92930 207 aa10.71□□□□□ -0.69
TCOF1-211ENST00000513346 PPP1R14AQ96A00 147 aa10.71□□□□□ -0.69
TCOF1-211ENST00000513346 YIPF6Q96EC8 236 aa10.71□□□□□ -0.69
TCOF1-211ENST00000513346 RNF31Q96EP0 1072 aa10.71□□□□□ -0.69
TCOF1-211ENST00000513346 SPO11Q9Y5K1 396 aa10.71□□□□□ -0.69
TCOF1-211ENST00000513346 AP1M2Q9Y6Q5 423 aa10.71□□□□□ -0.69
TCOF1-211ENST00000513346 ZBTB42B2RXF5 422 aa10.71□□□□□ -0.69
TCOF1-211ENST00000513346 GBAP04062 536 aa10.71□□□□□ -0.69
TCOF1-211ENST00000513346 RHOP08100 348 aa10.71□□□□□ -0.69
TCOF1-211ENST00000513346 HOXB2P14652 356 aa10.71□□□□□ -0.69
TCOF1-211ENST00000513346 E2F1Q01094 437 aa10.71□□□□□ -0.69
TCOF1-211ENST00000513346 FGL2Q14314 439 aa10.71□□□□□ -0.69
TCOF1-211ENST00000513346 EIPR1Q53HC9 387 aa10.71□□□□□ -0.69
TCOF1-211ENST00000513346 KDELC1Q6UW63 502 aa10.71□□□□□ -0.69
TCOF1-211ENST00000513346 LRRTM4Q86VH4 590 aa10.71□□□□□ -0.69
TCOF1-211ENST00000513346 NRSN1Q8IZ57 195 aa10.71□□□□□ -0.69
TCOF1-211ENST00000513346 ACBD7Q8N6N7 88 aa10.71□□□□□ -0.69
TCOF1-211ENST00000513346 PCNPQ8WW12 178 aaKnown RBP10.71□□□□□ -0.69
TCOF1-211ENST00000513346 CNOT9Q92600 299 aaKnown RBP10.71□□□□□ -0.69
TCOF1-211ENST00000513346 KIAA1143Q96AT1 154 aaPredicted RBP10.71□□□□□ -0.69
TCOF1-211ENST00000513346 OTUB2Q96DC9 234 aa10.71□□□□□ -0.69
TCOF1-211ENST00000513346 PGAP3Q96FM1 320 aaPredicted RBP10.71□□□□□ -0.69
TCOF1-211ENST00000513346 TRIM2Q9C040 744 aa10.71□□□□□ -0.69
TCOF1-211ENST00000513346 FMO6PO60774 539 aa10.71□□□□□ -0.7
TCOF1-211ENST00000513346 MMP20O60882 483 aa10.71□□□□□ -0.7
TCOF1-211ENST00000513346 TACSTD2P09758 323 aa10.71□□□□□ -0.7
TCOF1-211ENST00000513346 LAMP1P11279 417 aa10.71□□□□□ -0.7
TCOF1-211ENST00000513346 GNSP15586 552 aa10.71□□□□□ -0.7
TCOF1-211ENST00000513346 MMP12P39900 470 aa10.71□□□□□ -0.7
TCOF1-211ENST00000513346 RGNQ15493 299 aa10.71□□□□□ -0.7
TCOF1-211ENST00000513346 MARCH8Q5T0T0 291 aa10.71□□□□□ -0.7
TCOF1-211ENST00000513346 MPP7Q5T2T1 576 aa10.71□□□□□ -0.7
TCOF1-211ENST00000513346 SLC30A6Q6NXT4 461 aa10.71□□□□□ -0.7
TCOF1-211ENST00000513346 FAM171BQ6P995 826 aa10.71□□□□□ -0.7
TCOF1-211ENST00000513346 AGTRAPQ6RW13 159 aa10.71□□□□□ -0.7
TCOF1-211ENST00000513346 ZMIZ2Q8NF64 920 aa10.71□□□□□ -0.7
TCOF1-211ENST00000513346 ZNF566Q969W8 418 aa10.71□□□□□ -0.7
TCOF1-211ENST00000513346 GAL3ST1Q99999 423 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms