RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 CBSP35520 551 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 AQP2P41181 271 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 CELF5Q8N6W0 485 aaKnown RBP10.35□□□□□ -0.75
CPNE4-209ENST00000512055 OR7G1Q8NGA0 311 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 OR5H6Q8NGV6 325 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 OR2T35Q8NGX2 323 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 WFIKKN2Q8TEU8 576 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 ELMOD3Q96FG2 381 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 KCNC2Q96PR1 638 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 PLEKHA3Q9HB20 300 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 ZNF175Q9Y473 711 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 LOC285095A0A1B0GVY8 99 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 TSPAN6O43657 245 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 FMO6PO60774 539 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 ARL6IP5O75915 188 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 AMD1P17707 334 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 TNFAIP8L2Q6P589 184 aaPredicted RBP10.35□□□□□ -0.75
CPNE4-209ENST00000512055 HSDL2Q6YN16 418 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 ZNF619Q8N2I2 560 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 SLC43A3Q8NBI5 491 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 CHST14Q8NCH0 376 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 GLYATL2Q8WU03 294 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 PRRG4Q9BZD6 226 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 ARNT2Q9HBZ2 717 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 HCFC1R1Q9NWW0 138 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 PLAGL1Q9UM63 463 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 A0A087WZY1 265 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 CPED1A4D0V7 1026 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 SERPINA7P05543 415 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 PRKACGP22612 351 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 ATP4BP51164 291 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 ERVK-21P61565 698 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 MEF2AQ02078 507 aaPredicted RBP10.35□□□□□ -0.75
CPNE4-209ENST00000512055 TMEM115Q12893 351 aaPredicted RBP10.35□□□□□ -0.75
CPNE4-209ENST00000512055 LAPTM4AQ15012 233 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 PIGGQ5H8A4 983 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 FAM129CQ86XR2 697 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 Q8N402 240 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 SAMD12Q8N8I0 201 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 NRG4Q8WWG1 115 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 HPSE2Q8WWQ2 592 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 L3HYPDHQ96EM0 354 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 TTLL2Q9BWV7 592 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 ABCG5Q9H222 651 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 OR51B5Q9H339 312 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 IL26Q9NPH9 171 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 FBXW2Q9UKT8 454 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 KIAA1217Q5T5P2 1943 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 ATXN1LP0C7T5 689 aaKnown RBP10.35□□□□□ -0.75
CPNE4-209ENST00000512055 JUPP14923 745 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 TGM4P49221 684 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 CLCN4P51793 760 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 ERVPABLB-1P60509 514 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 CDK3Q00526 305 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 CLEC12AQ5QGZ9 265 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 NAXEQ8NCW5 288 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 LILRB4Q8NHJ6 448 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 FAM110BQ8TC76 370 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 BORCS7Q96B45 105 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 FBXL20Q96IG2 436 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 SLC29A3Q9BZD2 475 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 LINC00597Q9H2U6 94 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 GAREM1Q9H706 876 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 TXNL4BQ9NX01 149 aaKnown RBP10.35□□□□□ -0.75
CPNE4-209ENST00000512055 IL17CQ9P0M4 197 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 ERVW-1Q9UQF0 538 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 ATG4BQ9Y4P1 393 aa10.35□□□□□ -0.75
CPNE4-209ENST00000512055 POLR2AP24928 1970 aaKnown RBP10.34□□□□□ -0.75
CPNE4-209ENST00000512055 CSTBP04080 98 aaKnown RBP10.34□□□□□ -0.75
CPNE4-209ENST00000512055 RFC2P35250 354 aa10.34□□□□□ -0.75
CPNE4-209ENST00000512055 CTSOP43234 321 aaPredicted RBP10.34□□□□□ -0.75
CPNE4-209ENST00000512055 FOXM1Q08050 763 aa10.34□□□□□ -0.75
CPNE4-209ENST00000512055 LRP8Q14114 963 aa10.34□□□□□ -0.75
CPNE4-209ENST00000512055 PLEKHN1Q494U1 663 aaPredicted RBP10.34□□□□□ -0.75
CPNE4-209ENST00000512055 ADGRG6Q86SQ4 1221 aa10.34□□□□□ -0.75
CPNE4-209ENST00000512055 TMC8Q8IU68 726 aa10.34□□□□□ -0.75
CPNE4-209ENST00000512055 CNTN4Q8IWV2 1026 aa10.34□□□□□ -0.75
CPNE4-209ENST00000512055 OR51D1Q8NGF3 324 aa10.34□□□□□ -0.75
CPNE4-209ENST00000512055 CD200R1Q8TD46 325 aa10.34□□□□□ -0.75
CPNE4-209ENST00000512055 SLC25A44Q96H78 314 aaPredicted RBP10.34□□□□□ -0.75
CPNE4-209ENST00000512055 SLC45A3Q96JT2 553 aa10.34□□□□□ -0.75
CPNE4-209ENST00000512055 YTHDF1Q9BYJ9 559 aaKnown RBP10.34□□□□□ -0.75
CPNE4-209ENST00000512055 SOX17Q9H6I2 414 aaPredicted RBP10.34□□□□□ -0.75
CPNE4-209ENST00000512055 PLCXD1Q9NUJ7 323 aa10.34□□□□□ -0.75
CPNE4-209ENST00000512055 EVA1BQ9NVM1 165 aa10.34□□□□□ -0.75
CPNE4-209ENST00000512055 AIG1Q9NVV5 245 aa10.34□□□□□ -0.75
CPNE4-209ENST00000512055 VNN3Q9NY84 501 aa10.34□□□□□ -0.75
CPNE4-209ENST00000512055 A0A1W2PRB8 838 aa10.34□□□□□ -0.75
CPNE4-209ENST00000512055 KLK1P06870 262 aa10.34□□□□□ -0.75
CPNE4-209ENST00000512055 M6PRP20645 277 aa10.34□□□□□ -0.75
CPNE4-209ENST00000512055 NRIP1P48552 1158 aa10.34□□□□□ -0.75
CPNE4-209ENST00000512055 CLCNKAP51800 687 aa10.34□□□□□ -0.75
CPNE4-209ENST00000512055 GK2Q14410 553 aaPredicted RBP10.34□□□□□ -0.75
CPNE4-209ENST00000512055 PDGFRLQ15198 375 aa10.34□□□□□ -0.75
CPNE4-209ENST00000512055 PRAMEF13Q5VWM6 474 aa10.34□□□□□ -0.75
CPNE4-209ENST00000512055 CORO6Q6QEF8 472 aa10.34□□□□□ -0.75
CPNE4-209ENST00000512055 SSX7Q7RTT5 188 aa10.34□□□□□ -0.75
CPNE4-209ENST00000512055 FCAMRQ8WWV6 532 aa10.34□□□□□ -0.75
CPNE4-209ENST00000512055 ZNF641Q96N77 438 aaPredicted RBP10.34□□□□□ -0.75
CPNE4-209ENST00000512055 POTEKPQ9BYX7 375 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms