RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 HLA-DQA1Q5Y7H0 255 aa10.47□□□□□ -0.73
RNF4-216ENST00000511859 SLC30A6Q6NXT4 461 aa10.47□□□□□ -0.73
RNF4-216ENST00000511859 VWA1Q6PCB0 445 aa10.47□□□□□ -0.73
RNF4-216ENST00000511859 ANGPTL8Q6UXH0 198 aa10.47□□□□□ -0.73
RNF4-216ENST00000511859 TMEM64Q6YI46 380 aa10.47□□□□□ -0.73
RNF4-216ENST00000511859 ZNF793Q6ZN11 406 aa10.47□□□□□ -0.73
RNF4-216ENST00000511859 CHMP1BQ7LBR1 199 aa10.47□□□□□ -0.73
RNF4-216ENST00000511859 P4HA3Q7Z4N8 544 aa10.47□□□□□ -0.73
RNF4-216ENST00000511859 UBE3DQ7Z6J8 389 aa10.47□□□□□ -0.73
RNF4-216ENST00000511859 MCUQ8NE86 351 aa10.47□□□□□ -0.73
RNF4-216ENST00000511859 OR14L1PQ8NHC6 308 aa10.47□□□□□ -0.73
RNF4-216ENST00000511859 GRK7Q8WTQ7 553 aa10.47□□□□□ -0.73
RNF4-216ENST00000511859 VPS39Q96JC1 886 aa10.47□□□□□ -0.73
RNF4-216ENST00000511859 EGFL8Q99944 293 aa10.47□□□□□ -0.73
RNF4-216ENST00000511859 TRIM31Q9BZY9 425 aa10.47□□□□□ -0.73
RNF4-216ENST00000511859 OPN3Q9H1Y3 402 aaPredicted RBP10.47□□□□□ -0.73
RNF4-216ENST00000511859 LPAR3Q9UBY5 353 aa10.47□□□□□ -0.73
RNF4-216ENST00000511859 EXO1Q9UQ84 846 aaKnown RBP10.47□□□□□ -0.73
RNF4-216ENST00000511859 VWA7Q9Y334 891 aa10.47□□□□□ -0.73
RNF4-216ENST00000511859 CADP27708 2225 aa10.47□□□□□ -0.73
RNF4-216ENST00000511859 EMC8O43402 210 aa10.46□□□□□ -0.74
RNF4-216ENST00000511859 RAD51CO43502 376 aa10.46□□□□□ -0.74
RNF4-216ENST00000511859 CGAP01215 116 aa10.46□□□□□ -0.74
RNF4-216ENST00000511859 CTAGE8P0CG41 777 aa10.46□□□□□ -0.74
RNF4-216ENST00000511859 CD8BP10966 210 aa10.46□□□□□ -0.74
RNF4-216ENST00000511859 NAGAP17050 411 aa10.46□□□□□ -0.74
RNF4-216ENST00000511859 KRT15P19012 456 aa10.46□□□□□ -0.74
RNF4-216ENST00000511859 GDF5P43026 501 aa10.46□□□□□ -0.74
RNF4-216ENST00000511859 KIR2DL2P43627 348 aaPredicted RBP10.46□□□□□ -0.74
RNF4-216ENST00000511859 LHX2P50458 406 aa10.46□□□□□ -0.74
RNF4-216ENST00000511859 GFRA1P56159 465 aa10.46□□□□□ -0.74
RNF4-216ENST00000511859 FGFBP1Q14512 234 aa10.46□□□□□ -0.74
RNF4-216ENST00000511859 HIST2H2ACQ16777 129 aaPredicted RBP10.46□□□□□ -0.74
RNF4-216ENST00000511859 KBTBD12Q3ZCT8 623 aa10.46□□□□□ -0.74
RNF4-216ENST00000511859 TMEM35AQ53FP2 167 aa10.46□□□□□ -0.74
RNF4-216ENST00000511859 HIST2H2AA3Q6FI13 130 aa10.46□□□□□ -0.74
RNF4-216ENST00000511859 DNM1P46Q6ZS02 220 aa10.46□□□□□ -0.74
RNF4-216ENST00000511859 ZNF572Q7Z3I7 529 aaPredicted RBP10.46□□□□□ -0.74
RNF4-216ENST00000511859 GALNT7Q86SF2 657 aa10.46□□□□□ -0.74
RNF4-216ENST00000511859 IFNEQ86WN2 208 aa10.46□□□□□ -0.74
RNF4-216ENST00000511859 CTAGE4Q8IX94 777 aa10.46□□□□□ -0.74
RNF4-216ENST00000511859 NOA1Q8NC60 698 aaKnown RBP10.46□□□□□ -0.74
RNF4-216ENST00000511859 C17orf47Q8NEP4 570 aa10.46□□□□□ -0.74
RNF4-216ENST00000511859 DTNBP1Q96EV8 351 aa10.46□□□□□ -0.74
RNF4-216ENST00000511859 ZNF845Q96IR2 970 aaPredicted RBP10.46□□□□□ -0.74
RNF4-216ENST00000511859 TMEM204Q9BSN7 226 aa10.46□□□□□ -0.74
RNF4-216ENST00000511859 PHACTR1Q9C0D0 580 aa10.46□□□□□ -0.74
RNF4-216ENST00000511859 OR2B2Q9GZK3 357 aa10.46□□□□□ -0.74
RNF4-216ENST00000511859 SLCO5A1Q9H2Y9 848 aa10.46□□□□□ -0.74
RNF4-216ENST00000511859 METTL7AQ9H8H3 244 aa10.46□□□□□ -0.74
RNF4-216ENST00000511859 ACTR8Q9H981 624 aa10.46□□□□□ -0.74
RNF4-216ENST00000511859 ASIC3Q9UHC3 531 aa10.46□□□□□ -0.74
RNF4-216ENST00000511859 MALRD1Q5VYJ5 2156 aa10.45□□□□□ -0.74
RNF4-216ENST00000511859 CLGNO14967 610 aa10.45□□□□□ -0.74
RNF4-216ENST00000511859 OR10H2O60403 315 aa10.45□□□□□ -0.74
RNF4-216ENST00000511859 ICOSLGO75144 302 aa10.45□□□□□ -0.74
RNF4-216ENST00000511859 GPR75O95800 540 aa10.45□□□□□ -0.74
RNF4-216ENST00000511859 PLAUP00749 431 aa10.45□□□□□ -0.74
RNF4-216ENST00000511859 ABCB1P08183 1280 aaPredicted RBP10.45□□□□□ -0.74
RNF4-216ENST00000511859 ZNF708P17019 499 aa10.45□□□□□ -0.74
RNF4-216ENST00000511859 STARP49675 285 aa10.45□□□□□ -0.74
RNF4-216ENST00000511859 CLDN18P56856 261 aa10.45□□□□□ -0.74
RNF4-216ENST00000511859 RPS13P62277 151 aaKnown RBP10.45□□□□□ -0.74
RNF4-216ENST00000511859 SLC7A5Q01650 507 aa10.45□□□□□ -0.74
RNF4-216ENST00000511859 SLAMF1Q13291 335 aa10.45□□□□□ -0.74
RNF4-216ENST00000511859 LAPTM5Q13571 262 aa10.45□□□□□ -0.74
RNF4-216ENST00000511859 BCL2A1Q16548 175 aa10.45□□□□□ -0.74
RNF4-216ENST00000511859 C6orf52Q5T4I8 152 aa10.45□□□□□ -0.74
RNF4-216ENST00000511859 ANKRD22Q5VYY1 191 aa10.45□□□□□ -0.74
RNF4-216ENST00000511859 ADAM5Q6NVV9 412 aa10.45□□□□□ -0.74
RNF4-216ENST00000511859 GPR180Q86V85 440 aa10.45□□□□□ -0.74
RNF4-216ENST00000511859 ZNF610Q8N9Z0 462 aa10.45□□□□□ -0.74
RNF4-216ENST00000511859 MNS1Q8NEH6 495 aa10.45□□□□□ -0.74
RNF4-216ENST00000511859 ROBO4Q8WZ75 1007 aa10.45□□□□□ -0.74
RNF4-216ENST00000511859 AKAP1Q92667 903 aaKnown RBP eCLIP10.45□□□□□ -0.74
RNF4-216ENST00000511859 GTPBP3Q969Y2 492 aaKnown RBP10.45□□□□□ -0.74
RNF4-216ENST00000511859 ADIPOR1Q96A54 375 aa10.45□□□□□ -0.74
RNF4-216ENST00000511859 RHBDF1Q96CC6 855 aa10.45□□□□□ -0.74
RNF4-216ENST00000511859 PTCD3Q96EY7 689 aaKnown RBP10.45□□□□□ -0.74
RNF4-216ENST00000511859 SIGLEC10Q96LC7 697 aa10.45□□□□□ -0.74
RNF4-216ENST00000511859 KCNK17Q96T54 332 aa10.45□□□□□ -0.74
RNF4-216ENST00000511859 EFCAB11Q9BUY7 163 aa10.45□□□□□ -0.74
RNF4-216ENST00000511859 KLHL4Q9C0H6 718 aa10.45□□□□□ -0.74
RNF4-216ENST00000511859 DPH5Q9H2P9 285 aa10.45□□□□□ -0.74
RNF4-216ENST00000511859 TAS2R10Q9NYW0 307 aa10.45□□□□□ -0.74
RNF4-216ENST00000511859 IKZF3Q9UKT9 509 aa10.45□□□□□ -0.74
RNF4-216ENST00000511859 CORO1CQ9ULV4 474 aaPredicted RBP10.45□□□□□ -0.74
RNF4-216ENST00000511859 MRPS18CQ9Y3D5 142 aaKnown RBP10.45□□□□□ -0.74
RNF4-216ENST00000511859 OARD1Q9Y530 152 aa10.45□□□□□ -0.74
RNF4-216ENST00000511859 DYSFO75923 2080 aa10.44□□□□□ -0.74
RNF4-216ENST00000511859 SLC22A20A6NK97 555 aa10.44□□□□□ -0.74
RNF4-216ENST00000511859 RTCAO00442 366 aaKnown RBP10.44□□□□□ -0.74
RNF4-216ENST00000511859 CLPSP04118 112 aa10.44□□□□□ -0.74
RNF4-216ENST00000511859 THBDP07204 575 aa10.44□□□□□ -0.74
RNF4-216ENST00000511859 ABCD3P28288 659 aa10.44□□□□□ -0.74
RNF4-216ENST00000511859 ACVR1BP36896 505 aa10.44□□□□□ -0.74
RNF4-216ENST00000511859 MAGEA3P43357 314 aa10.44□□□□□ -0.74
RNF4-216ENST00000511859 PAGE2BQ5JRK9 111 aa10.44□□□□□ -0.74
RNF4-216ENST00000511859 ANKRD34AQ69YU3 496 aa10.44□□□□□ -0.74
RNF4-216ENST00000511859 OR4C11Q6IEV9 310 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms