RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 MRM1Q6IN84 353 aaKnown RBP17.21■□□□□ 0.35
HMGCS1-206ENST00000511774 PODNL1Q6PEZ8 512 aa17.21■□□□□ 0.35
HMGCS1-206ENST00000511774 GRAMD2AQ8IUY3 354 aa17.21■□□□□ 0.35
HMGCS1-206ENST00000511774 LAS2Q8IYD9 372 aa17.21■□□□□ 0.35
HMGCS1-206ENST00000511774 NXF5Q9H1B4 397 aaKnown RBP17.21■□□□□ 0.35
HMGCS1-206ENST00000511774 METTL7AQ9H8H3 244 aa17.21■□□□□ 0.35
HMGCS1-206ENST00000511774 PCNX3Q9H6A9 2034 aa17.2■□□□□ 0.34
HMGCS1-206ENST00000511774 ICOSLGO75144 302 aa17.2■□□□□ 0.34
HMGCS1-206ENST00000511774 KIR2DL2P43627 348 aaPredicted RBP17.2■□□□□ 0.34
HMGCS1-206ENST00000511774 ATP5J2P56134 94 aa17.2■□□□□ 0.34
HMGCS1-206ENST00000511774 SETDB1Q15047 1291 aa17.2■□□□□ 0.34
HMGCS1-206ENST00000511774 TBCCQ15814 346 aa17.2■□□□□ 0.34
HMGCS1-206ENST00000511774 HIPK1Q86Z02 1210 aa17.2■□□□□ 0.34
HMGCS1-206ENST00000511774 CNEP1R1Q8N9A8 125 aa17.2■□□□□ 0.34
HMGCS1-206ENST00000511774 C7orf57Q8NEG2 295 aa17.2■□□□□ 0.34
HMGCS1-206ENST00000511774 OR7G3Q8NG95 312 aa17.2■□□□□ 0.34
HMGCS1-206ENST00000511774 OR14L1PQ8NHC6 308 aa17.2■□□□□ 0.34
HMGCS1-206ENST00000511774 TMEM158Q8WZ71 300 aa17.2■□□□□ 0.34
HMGCS1-206ENST00000511774 PGM2Q96G03 612 aa17.2■□□□□ 0.34
HMGCS1-206ENST00000511774 ACBD3Q9H3P7 528 aa17.2■□□□□ 0.34
HMGCS1-206ENST00000511774 RYDENQ9NUL5 291 aaKnown RBP17.2■□□□□ 0.34
HMGCS1-206ENST00000511774 MS4A12Q9NXJ0 267 aa17.2■□□□□ 0.34
HMGCS1-206ENST00000511774 PTBP2Q9UKA9 531 aaKnown RBP17.2■□□□□ 0.34
HMGCS1-206ENST00000511774 CHMP2BQ9UQN3 213 aa17.2■□□□□ 0.34
HMGCS1-206ENST00000511774 LRRC14BA6NHZ5 514 aa17.19■□□□□ 0.34
HMGCS1-206ENST00000511774 KLF4O43474 513 aa17.19■□□□□ 0.34
HMGCS1-206ENST00000511774 AIFM1O95831 613 aa17.19■□□□□ 0.34
HMGCS1-206ENST00000511774 CGAP01215 116 aa17.19■□□□□ 0.34
HMGCS1-206ENST00000511774 SLC35E2BP0CK96 405 aa17.19■□□□□ 0.34
HMGCS1-206ENST00000511774 SLC35E2P0CK97 266 aa17.19■□□□□ 0.34
HMGCS1-206ENST00000511774 ZNF708P17019 499 aa17.19■□□□□ 0.34
HMGCS1-206ENST00000511774 S1PR1P21453 382 aa17.19■□□□□ 0.34
HMGCS1-206ENST00000511774 CNTFP26441 200 aa17.19■□□□□ 0.34
HMGCS1-206ENST00000511774 GALNSP34059 522 aa17.19■□□□□ 0.34
HMGCS1-206ENST00000511774 GMPRP36959 345 aa17.19■□□□□ 0.34
HMGCS1-206ENST00000511774 ELK3P41970 407 aa17.19■□□□□ 0.34
HMGCS1-206ENST00000511774 LAPTM5Q13571 262 aa17.19■□□□□ 0.34
HMGCS1-206ENST00000511774 KBTBD12Q3ZCT8 623 aa17.19■□□□□ 0.34
HMGCS1-206ENST00000511774 STEAP4Q687X5 459 aa17.19■□□□□ 0.34
HMGCS1-206ENST00000511774 ENPP6Q6UWR7 440 aa17.19■□□□□ 0.34
HMGCS1-206ENST00000511774 GPSM1Q86YR5 675 aa17.19■□□□□ 0.34
HMGCS1-206ENST00000511774 ZCCHC7Q8N3Z6 543 aaKnown RBP17.19■□□□□ 0.34
HMGCS1-206ENST00000511774 CMTM7Q96FZ5 175 aa17.19■□□□□ 0.34
HMGCS1-206ENST00000511774 PELOQ9BRX2 385 aaKnown RBP17.19■□□□□ 0.34
HMGCS1-206ENST00000511774 MCMBPQ9BTE3 642 aa17.19■□□□□ 0.34
HMGCS1-206ENST00000511774 OSBPL11Q9BXB4 747 aa17.19■□□□□ 0.34
HMGCS1-206ENST00000511774 DERL2Q9GZP9 239 aa17.19■□□□□ 0.34
HMGCS1-206ENST00000511774 OR10A5Q9H207 317 aa17.19■□□□□ 0.34
HMGCS1-206ENST00000511774 LZTFL1Q9NQ48 299 aa17.19■□□□□ 0.34
HMGCS1-206ENST00000511774 PHF11Q9UIL8 331 aa17.19■□□□□ 0.34
HMGCS1-206ENST00000511774 EXO1Q9UQ84 846 aaKnown RBP17.19■□□□□ 0.34
HMGCS1-206ENST00000511774 A0A0A6YYD5 115 aa17.18■□□□□ 0.34
HMGCS1-206ENST00000511774 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.18■□□□□ 0.34
HMGCS1-206ENST00000511774 PGRMC2O15173 223 aa17.18■□□□□ 0.34
HMGCS1-206ENST00000511774 PHF1O43189 567 aaPredicted RBP17.18■□□□□ 0.34
HMGCS1-206ENST00000511774 CCNT2O60583 730 aaKnown RBP17.18■□□□□ 0.34
HMGCS1-206ENST00000511774 PPM1BO75688 479 aa17.18■□□□□ 0.34
HMGCS1-206ENST00000511774 PIAS1O75925 651 aa17.18■□□□□ 0.34
HMGCS1-206ENST00000511774 F12P00748 615 aaPredicted RBP17.18■□□□□ 0.34
HMGCS1-206ENST00000511774 POU2F1P14859 743 aa17.18■□□□□ 0.34
HMGCS1-206ENST00000511774 GPX3P22352 226 aa17.18■□□□□ 0.34
HMGCS1-206ENST00000511774 CHMP24386 653 aa17.18■□□□□ 0.34
HMGCS1-206ENST00000511774 TMED10P49755 219 aaKnown RBP17.18■□□□□ 0.34
HMGCS1-206ENST00000511774 RPS13P62277 151 aaKnown RBP17.18■□□□□ 0.34
HMGCS1-206ENST00000511774 SIRPAP78324 504 aa17.18■□□□□ 0.34
HMGCS1-206ENST00000511774 DDX39BQ13838 428 aaKnown RBP17.18■□□□□ 0.34
HMGCS1-206ENST00000511774 HIST2H2ACQ16777 129 aaPredicted RBP17.18■□□□□ 0.34
HMGCS1-206ENST00000511774 PAGE2BQ5JRK9 111 aa17.18■□□□□ 0.34
HMGCS1-206ENST00000511774 HLA-DQA1Q5Y7H0 255 aa17.18■□□□□ 0.34
HMGCS1-206ENST00000511774 HIST2H2AA3Q6FI13 130 aa17.18■□□□□ 0.34
HMGCS1-206ENST00000511774 SULT1C3Q6IMI6 304 aa17.18■□□□□ 0.34
HMGCS1-206ENST00000511774 TMEM81Q6P7N7 255 aa17.18■□□□□ 0.34
HMGCS1-206ENST00000511774 TMEM171Q8WVE6 324 aa17.18■□□□□ 0.34
HMGCS1-206ENST00000511774 RGMAQ96B86 450 aa17.18■□□□□ 0.34
HMGCS1-206ENST00000511774 NAT9Q9BTE0 207 aa17.18■□□□□ 0.34
HMGCS1-206ENST00000511774 CNOT10Q9H9A5 744 aaKnown RBP17.18■□□□□ 0.34
HMGCS1-206ENST00000511774 CAB39LQ9H9S4 337 aa17.18■□□□□ 0.34
HMGCS1-206ENST00000511774 EHD3Q9NZN3 535 aa17.18■□□□□ 0.34
HMGCS1-206ENST00000511774 FBXL2Q9UKC9 423 aa17.18■□□□□ 0.34
HMGCS1-206ENST00000511774 ALPK2Q86TB3 2170 aa17.18■□□□□ 0.34
HMGCS1-206ENST00000511774 C17orf51A8MQB3 221 aa17.17■□□□□ 0.34
HMGCS1-206ENST00000511774 C16orf97H3BN30 126 aa17.17■□□□□ 0.34
HMGCS1-206ENST00000511774 DNALI1O14645 258 aaPredicted RBP17.17■□□□□ 0.34
HMGCS1-206ENST00000511774 NR2F6P10588 404 aa17.17■□□□□ 0.34
HMGCS1-206ENST00000511774 TCEA1P23193 301 aaKnown RBP17.17■□□□□ 0.34
HMGCS1-206ENST00000511774 TLX1P31314 330 aaPredicted RBP17.17■□□□□ 0.34
HMGCS1-206ENST00000511774 BSGP35613 385 aa17.17■□□□□ 0.34
HMGCS1-206ENST00000511774 CLDN15P56746 228 aa17.17■□□□□ 0.34
HMGCS1-206ENST00000511774 CLEC12BQ2HXU8 276 aa17.17■□□□□ 0.34
HMGCS1-206ENST00000511774 SLC30A6Q6NXT4 461 aa17.17■□□□□ 0.34
HMGCS1-206ENST00000511774 MED27Q6P2C8 311 aa17.17■□□□□ 0.34
HMGCS1-206ENST00000511774 IFNEQ86WN2 208 aa17.17■□□□□ 0.34
HMGCS1-206ENST00000511774 TCAIMQ8N3R3 496 aa17.17■□□□□ 0.34
HMGCS1-206ENST00000511774 PDPRQ8NCN5 879 aa17.17■□□□□ 0.34
HMGCS1-206ENST00000511774 HUS1BQ8NHY5 278 aa17.17■□□□□ 0.34
HMGCS1-206ENST00000511774 FIG4Q92562 907 aa17.17■□□□□ 0.34
HMGCS1-206ENST00000511774 RBSNQ9H1K0 784 aa17.17■□□□□ 0.34
HMGCS1-206ENST00000511774 ACTR8Q9H981 624 aa17.17■□□□□ 0.34
HMGCS1-206ENST00000511774 TAS2R10Q9NYW0 307 aa17.17■□□□□ 0.34
HMGCS1-206ENST00000511774 RNF112Q9ULX5 631 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms