RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 SERTAD2Q14140 314 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 GCNT6Q5T4J0 391 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 RHBDD2Q6NTF9 364 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 ZCCHC12Q6PEW1 402 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 BORAQ6PGQ7 559 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 SPATA24Q86W54 205 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 PTOV1Q86YD1 416 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 ZZZ3Q8IYH5 903 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 LGI4Q8N135 537 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 PQLC1Q8N2U9 271 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 OR2L13Q8N349 312 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 FAM156AQ8NDB6 213 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 AGBL5Q8NDL9 886 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 CATSPER1Q8NEC5 780 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 OR9A4Q8NGU2 314 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 FKBP10Q96AY3 582 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 TBC1D20Q96BZ9 403 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 AURKBQ96GD4 344 aaPredicted RBP8.54□□□□□ -1.04
NR1I3-228ENST00000511676 CRELD1Q96HD1 420 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 PCDHAC1Q9H158 963 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 STARD5Q9NSY2 213 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 DCAF13Q9NV06 445 aaKnown RBP8.54□□□□□ -1.04
NR1I3-228ENST00000511676 SIDT1Q9NXL6 827 aaKnown RBP8.54□□□□□ -1.04
NR1I3-228ENST00000511676 GIN1Q9NXP7 522 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 RPS6KA6Q9UK32 745 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 FAF1Q9UNN5 650 aaPredicted RBP8.54□□□□□ -1.04
NR1I3-228ENST00000511676 MRPS2Q9Y399 296 aaKnown RBP8.54□□□□□ -1.04
NR1I3-228ENST00000511676 LOXL2Q9Y4K0 774 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 MAP4K5Q9Y4K4 846 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 AP4S1Q9Y587 144 aa8.54□□□□□ -1.04
NR1I3-228ENST00000511676 A0A0A6YYC8 382 aaPredicted RBP8.53□□□□□ -1.04
NR1I3-228ENST00000511676 ZNF891A8MT65 544 aaPredicted RBP8.53□□□□□ -1.04
NR1I3-228ENST00000511676 H3BNX3 289 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 I3L1I5 382 aaPredicted RBP8.53□□□□□ -1.04
NR1I3-228ENST00000511676 EFSO43281 561 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 CHST10O43529 356 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 HCRTR1O43613 425 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 RDH16O75452 317 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 ERAL1O75616 437 aaKnown RBP8.53□□□□□ -1.04
NR1I3-228ENST00000511676 CREG1O75629 220 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 PDE9AO76083 593 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 B3GALT4O96024 378 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 GUSBP08236 651 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 RAP2AP10114 183 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 FGF5P12034 268 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 KDELR2P33947 212 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 GPC1P35052 558 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 RORAP35398 523 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 SOAT1P35610 550 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 XKP51811 444 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 DSTNP60981 165 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 CCL7P80098 99 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 PLIN5Q00G26 463 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 EEF1A2Q05639 463 aaKnown RBP8.53□□□□□ -1.04
NR1I3-228ENST00000511676 HSPB3Q12988 150 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 LY6DQ14210 128 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 GK3PQ14409 553 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 ADRM1Q16186 407 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 PRSS53Q2L4Q9 553 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 DEFB110Q30KQ9 67 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 SPDYE7PQ495Y7 208 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.53□□□□□ -1.04
NR1I3-228ENST00000511676 FAM98BQ52LJ0 330 aaKnown RBP8.53□□□□□ -1.04
NR1I3-228ENST00000511676 CRTC2Q53ET0 693 aaPredicted RBP8.53□□□□□ -1.04
NR1I3-228ENST00000511676 DCAF12Q5T6F0 453 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 AP1ARQ63HQ0 302 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 C18orf63Q68DL7 685 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 QSOX2Q6ZRP7 698 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 PATL1Q86TB9 770 aaKnown RBP8.53□□□□□ -1.04
NR1I3-228ENST00000511676 PACS2Q86VP3 889 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 ATCAYQ86WG3 371 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 IFNEQ86WN2 208 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 ADGRG5Q8IZF4 528 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 ST13P4Q8IZP2 240 aaPredicted RBP8.53□□□□□ -1.04
NR1I3-228ENST00000511676 MMP21Q8N119 569 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 HIPK4Q8NE63 616 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 OR1L3Q8NH93 324 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 RASSF5Q8WWW0 418 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 CTHRC1Q96CG8 243 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 ELP4Q96EB1 424 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 LRFN5Q96NI6 719 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 MS4A4EQ96PG1 132 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 DDA1Q9BW61 102 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 TGIF2Q9GZN2 237 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 MKKSQ9NPJ1 570 aaPredicted RBP8.53□□□□□ -1.04
NR1I3-228ENST00000511676 ZCCHC3Q9NUD5 404 aaKnown RBP8.53□□□□□ -1.04
NR1I3-228ENST00000511676 C14orf105Q9NVL8 296 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 GPATCH2Q9NW75 528 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 CALML5Q9NZT1 146 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 PISDQ9UG56 409 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 EGFL7Q9UHF1 273 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 CNOT11Q9UKZ1 510 aaKnown RBP8.53□□□□□ -1.04
NR1I3-228ENST00000511676 LIPT1Q9Y234 373 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 ANGPT4Q9Y264 503 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 PCDHGA3Q9Y5H0 932 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 CELSR3Q9NYQ7 3312 aa8.53□□□□□ -1.04
NR1I3-228ENST00000511676 SMG1Q96Q15 3661 aaKnown RBP8.53□□□□□ -1.04
NR1I3-228ENST00000511676 GCN1Q92616 2671 aaKnown RBP8.53□□□□□ -1.04
NR1I3-228ENST00000511676 SNRNP200O75643 2136 aaKnown RBP8.53□□□□□ -1.04
NR1I3-228ENST00000511676 MDC1Q14676 2089 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms