RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 ONECUT2O95948 504 aa14.23□□□□□ -0.13
SCLT1-209ENST00000511426 GUSBP08236 651 aa14.23□□□□□ -0.13
SCLT1-209ENST00000511426 CYC1P08574 325 aa14.23□□□□□ -0.13
SCLT1-209ENST00000511426 FBLP22087 321 aaKnown RBP14.23□□□□□ -0.13
SCLT1-209ENST00000511426 STT3AP46977 705 aa14.23□□□□□ -0.13
SCLT1-209ENST00000511426 CRYBA2P53672 197 aa14.23□□□□□ -0.13
SCLT1-209ENST00000511426 RPS26P62854 115 aaKnown RBP14.23□□□□□ -0.13
SCLT1-209ENST00000511426 KCNJ10P78508 379 aa14.23□□□□□ -0.13
SCLT1-209ENST00000511426 KCNC4Q03721 635 aa14.23□□□□□ -0.13
SCLT1-209ENST00000511426 TMPRSS9Q7Z410 1059 aa14.23□□□□□ -0.13
SCLT1-209ENST00000511426 ZDHHC13Q8IUH4 622 aa14.23□□□□□ -0.13
SCLT1-209ENST00000511426 OR4N5Q8IXE1 308 aa14.23□□□□□ -0.13
SCLT1-209ENST00000511426 KBTBD2Q8IY47 623 aa14.23□□□□□ -0.13
SCLT1-209ENST00000511426 XAGE5Q8WWM1 108 aa14.23□□□□□ -0.13
SCLT1-209ENST00000511426 HOXB13Q92826 284 aaPredicted RBP14.23□□□□□ -0.13
SCLT1-209ENST00000511426 KAT2AQ92830 837 aa14.23□□□□□ -0.13
SCLT1-209ENST00000511426 TAMM41Q96BW9 452 aa14.23□□□□□ -0.13
SCLT1-209ENST00000511426 NRBF2Q96F24 287 aa14.23□□□□□ -0.13
SCLT1-209ENST00000511426 ZNF597Q96LX8 424 aa14.23□□□□□ -0.13
SCLT1-209ENST00000511426 RDH12Q96NR8 316 aa14.23□□□□□ -0.13
SCLT1-209ENST00000511426 DGAT2Q96PD7 388 aa14.23□□□□□ -0.13
SCLT1-209ENST00000511426 TREX2Q9BQ50 279 aaPredicted RBP14.23□□□□□ -0.13
SCLT1-209ENST00000511426 SEMA6AQ9H2E6 1030 aa14.23□□□□□ -0.13
SCLT1-209ENST00000511426 PIGUQ9H490 435 aa14.23□□□□□ -0.13
SCLT1-209ENST00000511426 CXorf21Q9HAI6 301 aa14.23□□□□□ -0.13
SCLT1-209ENST00000511426 FTSJ1Q9UET6 329 aa14.23□□□□□ -0.13
SCLT1-209ENST00000511426 GPC6Q9Y625 555 aaPredicted RBP14.23□□□□□ -0.13
SCLT1-209ENST00000511426 ARID1BQ8NFD5 2236 aaPredicted RBP14.23□□□□□ -0.13
SCLT1-209ENST00000511426 A0A1W2PS29 197 aa14.23□□□□□ -0.13
SCLT1-209ENST00000511426 CASC3O15234 703 aaKnown RBP14.23□□□□□ -0.13
SCLT1-209ENST00000511426 DYRK3O43781 588 aa14.23□□□□□ -0.13
SCLT1-209ENST00000511426 SLC28A2O43868 658 aa14.23□□□□□ -0.13
SCLT1-209ENST00000511426 MFN2O95140 757 aa14.23□□□□□ -0.13
SCLT1-209ENST00000511426 RASAL1O95294 804 aa14.23□□□□□ -0.13
SCLT1-209ENST00000511426 HPRP00739 348 aa14.23□□□□□ -0.13
SCLT1-209ENST00000511426 ARHGDIAP52565 204 aa14.23□□□□□ -0.13
SCLT1-209ENST00000511426 HPCAP84074 193 aa14.23□□□□□ -0.13
SCLT1-209ENST00000511426 ZFP36L1Q07352 338 aaKnown RBP14.23□□□□□ -0.13
SCLT1-209ENST00000511426 MGAT2Q10469 447 aa14.23□□□□□ -0.13
SCLT1-209ENST00000511426 ILKQ13418 452 aa14.23□□□□□ -0.13
SCLT1-209ENST00000511426 SFT2D3Q587I9 215 aa14.23□□□□□ -0.13
SCLT1-209ENST00000511426 AP1ARQ63HQ0 302 aa14.23□□□□□ -0.13
SCLT1-209ENST00000511426 FAM111BQ6SJ93 734 aa14.23□□□□□ -0.13
SCLT1-209ENST00000511426 HIPK1Q86Z02 1210 aa14.23□□□□□ -0.13
SCLT1-209ENST00000511426 MAGED4Q96JG8 741 aa14.23□□□□□ -0.13
SCLT1-209ENST00000511426 CIB1Q99828 191 aa14.23□□□□□ -0.13
SCLT1-209ENST00000511426 OSBPL11Q9BXB4 747 aa14.23□□□□□ -0.13
SCLT1-209ENST00000511426 TGIF2Q9GZN2 237 aa14.23□□□□□ -0.13
SCLT1-209ENST00000511426 POLE3Q9NRF9 147 aa14.23□□□□□ -0.13
SCLT1-209ENST00000511426 IFT80Q9P2H3 777 aaPredicted RBP14.23□□□□□ -0.13
SCLT1-209ENST00000511426 OAZ3Q9UMX2 235 aa14.23□□□□□ -0.13
SCLT1-209ENST00000511426 R4GN57 208 aa14.23□□□□□ -0.13
SCLT1-209ENST00000511426 DSPPQ9NZW4 1301 aa14.22□□□□□ -0.13
SCLT1-209ENST00000511426 ADAMTS20P59510 1910 aa14.22□□□□□ -0.13
SCLT1-209ENST00000511426 TNFRSF10AO00220 468 aa14.22□□□□□ -0.13
SCLT1-209ENST00000511426 GNGT2O14610 69 aa14.22□□□□□ -0.13
SCLT1-209ENST00000511426 ADAMDEC1O15204 470 aa14.22□□□□□ -0.13
SCLT1-209ENST00000511426 LRP3O75074 770 aa14.22□□□□□ -0.13
SCLT1-209ENST00000511426 UQCRBP14927 111 aa14.22□□□□□ -0.13
SCLT1-209ENST00000511426 ALAS2P22557 587 aa14.22□□□□□ -0.13
SCLT1-209ENST00000511426 AQP1P29972 269 aa14.22□□□□□ -0.13
SCLT1-209ENST00000511426 CSTF2P33240 577 aaKnown RBP eCLIP14.22□□□□□ -0.13
SCLT1-209ENST00000511426 RORAP35398 523 aa14.22□□□□□ -0.13
SCLT1-209ENST00000511426 AQP4P55087 323 aa14.22□□□□□ -0.13
SCLT1-209ENST00000511426 CASP9P55211 416 aa14.22□□□□□ -0.13
SCLT1-209ENST00000511426 MAT1AQ00266 395 aaKnown RBP14.22□□□□□ -0.13
SCLT1-209ENST00000511426 OR2T5Q6IEZ7 315 aa14.22□□□□□ -0.13
SCLT1-209ENST00000511426 EPHX4Q8IUS5 362 aa14.22□□□□□ -0.13
SCLT1-209ENST00000511426 AGBL5Q8NDL9 886 aa14.22□□□□□ -0.13
SCLT1-209ENST00000511426 CHDHQ8NE62 594 aaPredicted RBP14.22□□□□□ -0.13
SCLT1-209ENST00000511426 OR5D16Q8NGK9 328 aa14.22□□□□□ -0.13
SCLT1-209ENST00000511426 OR2T29Q8NH02 315 aa14.22□□□□□ -0.13
SCLT1-209ENST00000511426 OR5K1Q8NHB7 308 aa14.22□□□□□ -0.13
SCLT1-209ENST00000511426 RHBDD1Q8TEB9 315 aa14.22□□□□□ -0.13
SCLT1-209ENST00000511426 RAB8BQ92930 207 aa14.22□□□□□ -0.13
SCLT1-209ENST00000511426 RIT1Q92963 219 aa14.22□□□□□ -0.13
SCLT1-209ENST00000511426 VPS50Q96JG6 964 aa14.22□□□□□ -0.13
SCLT1-209ENST00000511426 C7orf34Q96L11 122 aa14.22□□□□□ -0.13
SCLT1-209ENST00000511426 ALOXE3Q9BYJ1 711 aa14.22□□□□□ -0.13
SCLT1-209ENST00000511426 SLC7A5P2Q9GIP4 190 aa14.22□□□□□ -0.13
SCLT1-209ENST00000511426 COQ10BQ9H8M1 238 aa14.22□□□□□ -0.13
SCLT1-209ENST00000511426 NTN4Q9HB63 628 aa14.22□□□□□ -0.13
SCLT1-209ENST00000511426 LANCL2Q9NS86 450 aa14.22□□□□□ -0.13
SCLT1-209ENST00000511426 C14orf105Q9NVL8 296 aa14.22□□□□□ -0.13
SCLT1-209ENST00000511426 NDOR1Q9UHB4 597 aa14.22□□□□□ -0.13
SCLT1-209ENST00000511426 HCN4Q9Y3Q4 1203 aa14.22□□□□□ -0.13
SCLT1-209ENST00000511426 TMEM184BQ9Y519 407 aaPredicted RBP14.22□□□□□ -0.13
SCLT1-209ENST00000511426 IGLV3-12A0A075B6K2 115 aa14.21□□□□□ -0.13
SCLT1-209ENST00000511426 ACOX3O15254 700 aa14.21□□□□□ -0.13
SCLT1-209ENST00000511426 FOXD2O60548 495 aaPredicted RBP14.21□□□□□ -0.13
SCLT1-209ENST00000511426 PRAMEF2O60811 474 aa14.21□□□□□ -0.13
SCLT1-209ENST00000511426 ALOX5P09917 674 aa14.21□□□□□ -0.13
SCLT1-209ENST00000511426 FGF5P12034 268 aa14.21□□□□□ -0.13
SCLT1-209ENST00000511426 ZNF23P17027 643 aa14.21□□□□□ -0.13
SCLT1-209ENST00000511426 MAP3K8P41279 467 aa14.21□□□□□ -0.13
SCLT1-209ENST00000511426 MRPS35P82673 323 aaKnown RBP14.21□□□□□ -0.13
SCLT1-209ENST00000511426 EPS8Q12929 822 aa14.21□□□□□ -0.13
SCLT1-209ENST00000511426 MAPK11Q15759 364 aa14.21□□□□□ -0.13
SCLT1-209ENST00000511426 ARHGAP11BQ3KRB8 267 aa14.21□□□□□ -0.13
SCLT1-209ENST00000511426 ARHGAP40Q5TG30 622 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms