RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 TTMPQ5BVD1 217 aa12.51□□□□□ -0.41
SNF8-206ENST00000509989 FHL5Q5TD97 284 aa12.51□□□□□ -0.41
SNF8-206ENST00000509989 PRAMEF20Q5VT98 475 aa12.51□□□□□ -0.41
SNF8-206ENST00000509989 HIST2H2BCQ6DN03 193 aa12.51□□□□□ -0.41
SNF8-206ENST00000509989 RNF165Q6ZSG1 346 aa12.51□□□□□ -0.41
SNF8-206ENST00000509989 NCCRP1Q6ZVX7 275 aaPredicted RBP12.51□□□□□ -0.41
SNF8-206ENST00000509989 WDR53Q7Z5U6 358 aaPredicted RBP12.51□□□□□ -0.41
SNF8-206ENST00000509989 LRRC25Q8N386 305 aaPredicted RBP12.51□□□□□ -0.41
SNF8-206ENST00000509989 VWA5B2Q8N398 1253 aa12.51□□□□□ -0.41
SNF8-206ENST00000509989 TMEM178AQ8NBL3 297 aa12.51□□□□□ -0.41
SNF8-206ENST00000509989 OR10G3Q8NGC4 313 aa12.51□□□□□ -0.41
SNF8-206ENST00000509989 OR52N2Q8NGI0 321 aa12.51□□□□□ -0.41
SNF8-206ENST00000509989 SH2D2AQ9NP31 389 aa12.51□□□□□ -0.41
SNF8-206ENST00000509989 PFDN4Q9NQP4 134 aa12.51□□□□□ -0.41
SNF8-206ENST00000509989 ASH1LQ9NR48 2969 aaKnown RBP12.51□□□□□ -0.41
SNF8-206ENST00000509989 ACTL7BQ9Y614 415 aa12.51□□□□□ -0.41
SNF8-206ENST00000509989 SPTAN1Q13813 2472 aaKnown RBP12.51□□□□□ -0.41
SNF8-206ENST00000509989 FLNBO75369 2602 aaKnown RBP12.5□□□□□ -0.41
SNF8-206ENST00000509989 GOLGA6L10A6NI86 522 aa12.5□□□□□ -0.41
SNF8-206ENST00000509989 TM9SF1O15321 606 aa12.5□□□□□ -0.41
SNF8-206ENST00000509989 BIRC5O15392 142 aa12.5□□□□□ -0.41
SNF8-206ENST00000509989 RGS14O43566 566 aa12.5□□□□□ -0.41
SNF8-206ENST00000509989 HS6ST1O60243 411 aa12.5□□□□□ -0.41
SNF8-206ENST00000509989 HSPA4LO95757 839 aa12.5□□□□□ -0.41
SNF8-206ENST00000509989 SERPINE1P05121 402 aa12.5□□□□□ -0.41
SNF8-206ENST00000509989 CELA3AP09093 270 aa12.5□□□□□ -0.41
SNF8-206ENST00000509989 MYZAPP0CAP1 466 aa12.5□□□□□ -0.41
SNF8-206ENST00000509989 BCKDHAP12694 445 aa12.5□□□□□ -0.41
SNF8-206ENST00000509989 SLC1A6P48664 564 aa12.5□□□□□ -0.41
SNF8-206ENST00000509989 ALDH6A1Q02252 535 aaKnown RBP12.5□□□□□ -0.41
SNF8-206ENST00000509989 PDCD2Q16342 344 aaPredicted RBP12.5□□□□□ -0.41
SNF8-206ENST00000509989 INAQ16352 499 aa12.5□□□□□ -0.41
SNF8-206ENST00000509989 C6orf136Q5SQH8 315 aa12.5□□□□□ -0.41
SNF8-206ENST00000509989 C1QL3Q5VWW1 255 aa12.5□□□□□ -0.41
SNF8-206ENST00000509989 GFRALQ6UXV0 394 aa12.5□□□□□ -0.41
SNF8-206ENST00000509989 NPSR1Q6W5P4 371 aa12.5□□□□□ -0.41
SNF8-206ENST00000509989 SLC29A4Q7RTT9 530 aa12.5□□□□□ -0.41
SNF8-206ENST00000509989 ZNF551Q7Z340 670 aaPredicted RBP12.5□□□□□ -0.41
SNF8-206ENST00000509989 OR2M7Q8NG81 312 aa12.5□□□□□ -0.41
SNF8-206ENST00000509989 OR5L2Q8NGL0 311 aa12.5□□□□□ -0.41
SNF8-206ENST00000509989 ART5Q96L15 291 aa12.5□□□□□ -0.41
SNF8-206ENST00000509989 GLIPR2Q9H4G4 154 aa12.5□□□□□ -0.41
SNF8-206ENST00000509989 TUBA8Q9NY65 449 aaPredicted RBP12.5□□□□□ -0.41
SNF8-206ENST00000509989 EHD3Q9NZN3 535 aa12.5□□□□□ -0.41
SNF8-206ENST00000509989 LIPGQ9Y5X9 500 aa12.5□□□□□ -0.41
SNF8-206ENST00000509989 ZNF780BQ9Y6R6 833 aa12.5□□□□□ -0.41
SNF8-206ENST00000509989 SYNDIG1LA6NDD5 238 aa12.49□□□□□ -0.41
SNF8-206ENST00000509989 C17orf51A8MQB3 221 aa12.49□□□□□ -0.41
SNF8-206ENST00000509989 FAM166BA8MTA8 275 aa12.49□□□□□ -0.41
SNF8-206ENST00000509989 PDE9AO76083 593 aa12.49□□□□□ -0.41
SNF8-206ENST00000509989 ZWINTO95229 277 aa12.49□□□□□ -0.41
SNF8-206ENST00000509989 FBXO45P0C2W1 286 aa12.49□□□□□ -0.41
SNF8-206ENST00000509989 H2AFXP16104 143 aaPredicted RBP12.49□□□□□ -0.41
SNF8-206ENST00000509989 MC3RP41968 323 aa12.49□□□□□ -0.41
SNF8-206ENST00000509989 CORO7P57737 925 aa12.49□□□□□ -0.41
SNF8-206ENST00000509989 PTGR1Q14914 329 aa12.49□□□□□ -0.41
SNF8-206ENST00000509989 HEPACAMQ14CZ8 416 aa12.49□□□□□ -0.41
SNF8-206ENST00000509989 TMEM107Q6UX40 140 aa12.49□□□□□ -0.41
SNF8-206ENST00000509989 RTL4Q6ZR62 310 aa12.49□□□□□ -0.41
SNF8-206ENST00000509989 LIX1Q8N485 282 aa12.49□□□□□ -0.41
SNF8-206ENST00000509989 FAM26EQ8N5C1 309 aa12.49□□□□□ -0.41
SNF8-206ENST00000509989 KRTCAP2Q8N6L1 136 aa12.49□□□□□ -0.41
SNF8-206ENST00000509989 ZFP62Q8NB50 900 aaPredicted RBP12.49□□□□□ -0.41
SNF8-206ENST00000509989 FAM13CQ8NE31 585 aa12.49□□□□□ -0.41
SNF8-206ENST00000509989 OR4N2Q8NGD1 307 aa12.49□□□□□ -0.41
SNF8-206ENST00000509989 DNAJB8Q8NHS0 232 aa12.49□□□□□ -0.41
SNF8-206ENST00000509989 PPP1R14CQ8TAE6 165 aa12.49□□□□□ -0.41
SNF8-206ENST00000509989 TMEM125Q96AQ2 219 aa12.49□□□□□ -0.41
SNF8-206ENST00000509989 SPACA9Q96E40 222 aaPredicted RBP12.49□□□□□ -0.41
SNF8-206ENST00000509989 MAGED4Q96JG8 741 aa12.49□□□□□ -0.41
SNF8-206ENST00000509989 GPR137Q96N19 417 aa12.49□□□□□ -0.41
SNF8-206ENST00000509989 DEFB127Q9H1M4 99 aa12.49□□□□□ -0.41
SNF8-206ENST00000509989 EML4Q9HC35 981 aaKnown RBP12.49□□□□□ -0.41
SNF8-206ENST00000509989 TIMMDC1Q9NPL8 285 aa12.49□□□□□ -0.41
SNF8-206ENST00000509989 SEC14L3Q9UDX4 400 aa12.49□□□□□ -0.41
SNF8-206ENST00000509989 SH3BGRL2Q9UJC5 107 aa12.49□□□□□ -0.41
SNF8-206ENST00000509989 CNOT11Q9UKZ1 510 aaKnown RBP12.49□□□□□ -0.41
SNF8-206ENST00000509989 KLF13Q9Y2Y9 288 aaPredicted RBP12.49□□□□□ -0.41
SNF8-206ENST00000509989 CHCHD2Q9Y6H1 151 aaPredicted RBP12.49□□□□□ -0.41
SNF8-206ENST00000509989 OR6C76A6NM76 312 aa12.48□□□□□ -0.41
SNF8-206ENST00000509989 TMEM114B3SHH9 223 aa12.48□□□□□ -0.41
SNF8-206ENST00000509989 DYRK3O43781 588 aa12.48□□□□□ -0.41
SNF8-206ENST00000509989 SASH3O75995 380 aa12.48□□□□□ -0.41
SNF8-206ENST00000509989 CRYABP02511 175 aaKnown RBP12.48□□□□□ -0.41
SNF8-206ENST00000509989 RFPL3SP0C7P2 107 aa12.48□□□□□ -0.41
SNF8-206ENST00000509989 CDK9P50750 372 aaKnown RBP12.48□□□□□ -0.41
SNF8-206ENST00000509989 NCBP2P52298 156 aaKnown RBP eCLIP12.48□□□□□ -0.41
SNF8-206ENST00000509989 FOXO1Q12778 655 aa12.48□□□□□ -0.41
SNF8-206ENST00000509989 STX3Q13277 289 aa12.48□□□□□ -0.41
SNF8-206ENST00000509989 CMPK2Q5EBM0 449 aa12.48□□□□□ -0.41
SNF8-206ENST00000509989 HHATQ5VTY9 493 aa12.48□□□□□ -0.41
SNF8-206ENST00000509989 OPN5Q6U736 354 aa12.48□□□□□ -0.41
SNF8-206ENST00000509989 HORMAD2Q8N7B1 307 aa12.48□□□□□ -0.41
SNF8-206ENST00000509989 OR7G1Q8NGA0 311 aa12.48□□□□□ -0.41
SNF8-206ENST00000509989 OR7A2PQ8NGA2 310 aa12.48□□□□□ -0.41
SNF8-206ENST00000509989 FAM76AQ8TAV0 307 aa12.48□□□□□ -0.41
SNF8-206ENST00000509989 ZNF675Q8TD23 568 aa12.48□□□□□ -0.41
SNF8-206ENST00000509989 AMDHD1Q96NU7 426 aa12.48□□□□□ -0.41
SNF8-206ENST00000509989 BBS4Q96RK4 519 aa12.48□□□□□ -0.41
SNF8-206ENST00000509989 NODALQ96S42 347 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms