RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 DLGAP2Q9P1A6 1054 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 STOX2Q9P2F5 926 aaPredicted RBP4.26□□□□□ -1.73
NIPBL-206ENST00000509429 STOML2Q9UJZ1 356 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 MGAT4AQ9UM21 535 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 PLA2G4CQ9UP65 541 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 CDYLQ9Y232 598 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 MRPS33Q9Y291 106 aaKnown RBP4.26□□□□□ -1.73
NIPBL-206ENST00000509429 ADAM18Q9Y3Q7 739 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 TBL2Q9Y4P3 447 aaKnown RBP4.26□□□□□ -1.73
NIPBL-206ENST00000509429 MMACHCQ9Y4U1 282 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 EDC4Q6P2E9 1401 aaKnown RBP4.26□□□□□ -1.73
NIPBL-206ENST00000509429 SSH2Q76I76 1423 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 YTHDC2Q9H6S0 1430 aaKnown RBP4.26□□□□□ -1.73
NIPBL-206ENST00000509429 RIMS2Q9UQ26 1411 aa4.26□□□□□ -1.73
NIPBL-206ENST00000509429 PXDNLA1KZ92 1463 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 A0A1W2PRG6 482 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 GAGE12BA1L429 117 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 GAGE12HA6NDE8 117 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 FAM90A27PA6NNH2 459 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 MAGEB17A8MXT2 336 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 ZNF561-AS1K7EIQ3 104 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 WWP2O00308 870 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 TFECO14948 347 aaPredicted RBP4.25□□□□□ -1.73
NIPBL-206ENST00000509429 ARPC3O15145 178 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 GRM6O15303 877 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 MSCO60682 206 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 TOM1O60784 492 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 BRI3O95415 125 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 EPOP01588 193 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 IFNA4P05014 189 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 RHOP08100 348 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 NBEAP1P0C6P0 100 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 OCMP0CE72 109 aaPredicted RBP4.25□□□□□ -1.73
NIPBL-206ENST00000509429 RGPD1P0DJD0 1748 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 THRAP10827 490 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 ITGAMP11215 1152 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 CDH1P12830 882 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 CEACAM1P13688 526 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 DAOP14920 347 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 ACADSP16219 412 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 NDUFB7P17568 137 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 CEBPBP17676 345 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 IGFBP5P24593 272 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 DNASE1P24855 282 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 DPP4P27487 766 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 OTX1P32242 354 aaPredicted RBP4.25□□□□□ -1.73
NIPBL-206ENST00000509429 SHMT2P34897 504 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 DLSTP36957 453 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 GRIA1P42261 906 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 MMP13P45452 471 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 RARRES1P49788 294 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 SERPINH1P50454 418 aaKnown RBP4.25□□□□□ -1.73
NIPBL-206ENST00000509429 MMP15P51511 669 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 HK3P52790 923 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 ESRRGP62508 458 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 KCNJ2P63252 427 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 CSTF1Q05048 431 aaKnown RBP4.25□□□□□ -1.73
NIPBL-206ENST00000509429 TNFRSF9Q07011 255 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 TMEM115Q12893 351 aaPredicted RBP4.25□□□□□ -1.73
NIPBL-206ENST00000509429 GRAPQ13588 217 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 RAB32Q13637 225 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 TFDP1Q14186 410 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 ZNF268Q14587 947 aaPredicted RBP4.25□□□□□ -1.73
NIPBL-206ENST00000509429 ZNF169Q14929 603 aaPredicted RBP4.25□□□□□ -1.73
NIPBL-206ENST00000509429 TRAM2Q15035 370 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 IRF4Q15306 451 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 TMED2Q15363 201 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 BSXQ3C1V8 233 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 PTCHD3Q3KNS1 767 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 ESCO2Q56NI9 601 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 XKR6Q5GH73 641 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 ZNF691Q5VV52 312 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 LIPMQ5VYY2 423 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 ADNP2Q6IQ32 1131 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 TMEM220Q6QAJ8 160 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 FRMD7Q6ZUT3 714 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 PARS2Q7L3T8 475 aaKnown RBP4.25□□□□□ -1.73
NIPBL-206ENST00000509429 SYT13Q7L8C5 426 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 OTOP1Q7RTM1 612 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 TECPR1Q7Z6L1 1165 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 NT5DC3Q86UY8 548 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 ZNF280BQ86YH2 543 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 UBQLNLQ8IYU4 475 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 RBFAQ8N0V3 343 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 ABRAQ8N0Z2 381 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 LRRC75A-AS1Q8N1F1 130 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 LILRA3Q8N6C8 439 aaPredicted RBP4.25□□□□□ -1.73
NIPBL-206ENST00000509429 C8orf58Q8NAV2 365 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 CCDC197Q8NCU1 140 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 FBXL13Q8NEE6 735 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 TMEM185AQ8NFB2 350 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 STXBP6Q8NFX7 210 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.25□□□□□ -1.73
NIPBL-206ENST00000509429 ZCCHC10Q8TBK6 192 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 FAM222BQ8WU58 562 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 CERS2Q96G23 380 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 PGAM5Q96HS1 289 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 MRGPRX1Q96LB2 322 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 ZNF597Q96LX8 424 aa4.25□□□□□ -1.73
NIPBL-206ENST00000509429 ZNF583Q96ND8 569 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms