RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 ALDH9A1P49189 494 aa14.09□□□□□ -0.15
TPM3-219ENST00000509409 CDK9P50750 372 aaKnown RBP14.09□□□□□ -0.15
TPM3-219ENST00000509409 SF3B4Q15427 424 aaKnown RBP eCLIP14.09□□□□□ -0.151e-13■■□□□ 12.6
TPM3-219ENST00000509409 TESK1Q15569 626 aa14.09□□□□□ -0.15
TPM3-219ENST00000509409 NNATQ16517 81 aa14.09□□□□□ -0.15
TPM3-219ENST00000509409 SLC48A1Q6P1K1 146 aa14.09□□□□□ -0.15
TPM3-219ENST00000509409 LETMD1Q6P1Q0 360 aa14.09□□□□□ -0.15
TPM3-219ENST00000509409 PM20D2Q8IYS1 436 aa14.09□□□□□ -0.15
TPM3-219ENST00000509409 MMP21Q8N119 569 aa14.09□□□□□ -0.15
TPM3-219ENST00000509409 VWA5B2Q8N398 1253 aa14.09□□□□□ -0.15
TPM3-219ENST00000509409 MNS1Q8NEH6 495 aa14.09□□□□□ -0.15
TPM3-219ENST00000509409 ADCY4Q8NFM4 1077 aa14.09□□□□□ -0.15
TPM3-219ENST00000509409 ZNF483Q8TF39 744 aaPredicted RBP14.09□□□□□ -0.15
TPM3-219ENST00000509409 DCAKDQ8WVC6 231 aa14.09□□□□□ -0.15
TPM3-219ENST00000509409 TM4SF18Q96CE8 201 aa14.09□□□□□ -0.15
TPM3-219ENST00000509409 KLHL29Q96CT2 875 aa14.09□□□□□ -0.15
TPM3-219ENST00000509409 FAIM2Q9BWQ8 316 aa14.09□□□□□ -0.15
TPM3-219ENST00000509409 NXF5Q9H1B4 397 aaKnown RBP14.09□□□□□ -0.15
TPM3-219ENST00000509409 DNAJB12Q9NXW2 375 aaKnown RBP14.09□□□□□ -0.15
TPM3-219ENST00000509409 ZNF180Q9UJW8 692 aa14.09□□□□□ -0.15
TPM3-219ENST00000509409 CES1P1Q9UKY3 287 aa14.09□□□□□ -0.15
TPM3-219ENST00000509409 ZNF780BQ9Y6R6 833 aa14.09□□□□□ -0.15
TPM3-219ENST00000509409 A0A1B0GTL3 188 aa14.08□□□□□ -0.16
TPM3-219ENST00000509409 A8MT66 165 aa14.08□□□□□ -0.16
TPM3-219ENST00000509409 CDH16O75309 829 aa14.08□□□□□ -0.16
TPM3-219ENST00000509409 OR4F21O95013 312 aa14.08□□□□□ -0.16
TPM3-219ENST00000509409 EPPINO95925 133 aa14.08□□□□□ -0.16
TPM3-219ENST00000509409 IL2RAP01589 272 aa14.08□□□□□ -0.16
TPM3-219ENST00000509409 HPNP05981 417 aa14.08□□□□□ -0.16
TPM3-219ENST00000509409 ABCB1P08183 1280 aaPredicted RBP14.08□□□□□ -0.16
TPM3-219ENST00000509409 RPS17P08708 135 aaKnown RBP14.08□□□□□ -0.16
TPM3-219ENST00000509409 S1PR1P21453 382 aa14.08□□□□□ -0.16
TPM3-219ENST00000509409 GPX3P22352 226 aa14.08□□□□□ -0.16
TPM3-219ENST00000509409 HSD17B3P37058 310 aa14.08□□□□□ -0.16
TPM3-219ENST00000509409 MAP4K2Q12851 820 aa14.08□□□□□ -0.16
TPM3-219ENST00000509409 EXOSC7Q15024 291 aaKnown RBP14.08□□□□□ -0.16
TPM3-219ENST00000509409 PRICKLE4Q2TBC4 344 aa14.08□□□□□ -0.16
TPM3-219ENST00000509409 EIPR1Q53HC9 387 aa14.08□□□□□ -0.16
TPM3-219ENST00000509409 SEM1Q6ZVN7 128 aa14.08□□□□□ -0.16
TPM3-219ENST00000509409 ZZZ3Q8IYH5 903 aa14.08□□□□□ -0.16
TPM3-219ENST00000509409 C1orf52Q8N6N3 182 aaKnown RBP14.08□□□□□ -0.16
TPM3-219ENST00000509409 NOA1Q8NC60 698 aaKnown RBP14.08□□□□□ -0.16
TPM3-219ENST00000509409 C17orf47Q8NEP4 570 aa14.08□□□□□ -0.16
TPM3-219ENST00000509409 TNIP2Q8NFZ5 429 aa14.08□□□□□ -0.16
TPM3-219ENST00000509409 OR1J4Q8NGS1 313 aa14.08□□□□□ -0.16
TPM3-219ENST00000509409 ABTB1Q969K4 478 aaPredicted RBP14.08□□□□□ -0.16
TPM3-219ENST00000509409 LCORQ96JN0 433 aaPredicted RBP14.08□□□□□ -0.16
TPM3-219ENST00000509409 BRF2Q9HAW0 419 aa14.08□□□□□ -0.16
TPM3-219ENST00000509409 VPS29Q9UBQ0 182 aa14.08□□□□□ -0.16
TPM3-219ENST00000509409 DTX4Q9Y2E6 619 aa14.08□□□□□ -0.16
TPM3-219ENST00000509409 C15orf41Q9Y2V0 281 aa14.08□□□□□ -0.16
TPM3-219ENST00000509409 L3MBTL1Q9Y468 752 aa14.08□□□□□ -0.16
TPM3-219ENST00000509409 PHF3Q92576 2039 aaKnown RBP14.08□□□□□ -0.16
TPM3-219ENST00000509409 F8P00451 2351 aa14.07□□□□□ -0.16
TPM3-219ENST00000509409 EXOC1LA0A1B0GW35 172 aa14.07□□□□□ -0.16
TPM3-219ENST00000509409 C2orf72A6NCS6 295 aa14.07□□□□□ -0.16
TPM3-219ENST00000509409 SYT5O00445 386 aa14.07□□□□□ -0.16
TPM3-219ENST00000509409 PPM1BO75688 479 aa14.07□□□□□ -0.16
TPM3-219ENST00000509409 SUPT7LO94864 414 aa14.07□□□□□ -0.16
TPM3-219ENST00000509409 CTAGE8P0CG41 777 aa14.07□□□□□ -0.16
TPM3-219ENST00000509409 CD1EP15812 388 aa14.07□□□□□ -0.16
TPM3-219ENST00000509409 NAGAP17050 411 aa14.07□□□□□ -0.16
TPM3-219ENST00000509409 GCKP35557 465 aa14.07□□□□□ -0.16
TPM3-219ENST00000509409 ART1P52961 327 aa14.07□□□□□ -0.16
TPM3-219ENST00000509409 WNT3P56703 355 aa14.07□□□□□ -0.16
TPM3-219ENST00000509409 RIPPLY3P57055 190 aa14.07□□□□□ -0.16
TPM3-219ENST00000509409 TRA2BP62995 288 aaKnown RBP14.07□□□□□ -0.16
TPM3-219ENST00000509409 CLCQ05315 142 aa14.07□□□□□ -0.16
TPM3-219ENST00000509409 CRYZQ08257 329 aaKnown RBP14.07□□□□□ -0.16
TPM3-219ENST00000509409 PLCXD2Q0VAA5 305 aa14.07□□□□□ -0.16
TPM3-219ENST00000509409 GALNT1Q10472 559 aaPredicted RBP14.07□□□□□ -0.16
TPM3-219ENST00000509409 ACSF3Q4G176 576 aaPredicted RBP14.07□□□□□ -0.16
TPM3-219ENST00000509409 GLE1Q53GS7 698 aaKnown RBP14.07□□□□□ -0.16
TPM3-219ENST00000509409 WIPI1Q5MNZ9 446 aaPredicted RBP14.07□□□□□ -0.16
TPM3-219ENST00000509409 TIGD3Q6B0B8 471 aa14.07□□□□□ -0.16
TPM3-219ENST00000509409 FAM180BQ6P0A1 224 aa14.07□□□□□ -0.16
TPM3-219ENST00000509409 ANGPTL8Q6UXH0 198 aa14.07□□□□□ -0.16
TPM3-219ENST00000509409 SPNS3Q6ZMD2 512 aa14.07□□□□□ -0.16
TPM3-219ENST00000509409 NUP54Q7Z3B4 507 aa14.07□□□□□ -0.16
TPM3-219ENST00000509409 YRDCQ86U90 279 aaKnown RBP14.07□□□□□ -0.16
TPM3-219ENST00000509409 LACC1Q8IV20 430 aa14.07□□□□□ -0.16
TPM3-219ENST00000509409 CTAGE4Q8IX94 777 aa14.07□□□□□ -0.16
TPM3-219ENST00000509409 CDYL2Q8N8U2 506 aa14.07□□□□□ -0.16
TPM3-219ENST00000509409 OR52R1Q8NGF1 315 aa14.07□□□□□ -0.16
TPM3-219ENST00000509409 OMA1Q96E52 524 aa14.07□□□□□ -0.16
TPM3-219ENST00000509409 HSPBAP1Q96EW2 488 aa14.07□□□□□ -0.16
TPM3-219ENST00000509409 TMEM41AQ96HV5 264 aa14.07□□□□□ -0.16
TPM3-219ENST00000509409 TRIB1Q96RU8 372 aa14.07□□□□□ -0.16
TPM3-219ENST00000509409 HBEGFQ99075 208 aa14.07□□□□□ -0.16
TPM3-219ENST00000509409 ITPAQ9BY32 194 aa14.07□□□□□ -0.16
TPM3-219ENST00000509409 POLDIP3Q9BY77 421 aaKnown RBP14.07□□□□□ -0.16
TPM3-219ENST00000509409 EPB41L4BQ9H329 900 aa14.07□□□□□ -0.16
TPM3-219ENST00000509409 MAT2BQ9NZL9 334 aa14.07□□□□□ -0.16
TPM3-219ENST00000509409 KLRF1Q9NZS2 232 aa14.07□□□□□ -0.16
TPM3-219ENST00000509409 PRODH2Q9UF12 536 aa14.07□□□□□ -0.16
TPM3-219ENST00000509409 TRPS1Q9UHF7 1281 aa14.07□□□□□ -0.16
TPM3-219ENST00000509409 NINQ8N4C6 2090 aa14.06□□□□□ -0.16
TPM3-219ENST00000509409 KDM4EB2RXH2 506 aaPredicted RBP14.06□□□□□ -0.16
TPM3-219ENST00000509409 MANBAO00462 879 aa14.06□□□□□ -0.16
TPM3-219ENST00000509409 KRT6AP02538 564 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms