RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 BNIP1Q12981 228 aa8.04□□□□□ -1.12
USP46-207ENST00000508499 CHAF1BQ13112 559 aa8.04□□□□□ -1.12
USP46-207ENST00000508499 FADDQ13158 208 aa8.04□□□□□ -1.12
USP46-207ENST00000508499 PAGE3Q5JUK9 113 aa8.04□□□□□ -1.12
USP46-207ENST00000508499 C6orf163Q5TEZ5 329 aa8.04□□□□□ -1.12
USP46-207ENST00000508499 SAXO2Q658L1 398 aa8.04□□□□□ -1.12
USP46-207ENST00000508499 JMJD6Q6NYC1 403 aaPredicted RBP8.04□□□□□ -1.12
USP46-207ENST00000508499 PAPD4Q6PIY7 484 aaKnown RBP8.04□□□□□ -1.12
USP46-207ENST00000508499 UNQ6494/PRO21346Q6UXR6 183 aa8.04□□□□□ -1.12
USP46-207ENST00000508499 LANCL3Q6ZV70 420 aa8.04□□□□□ -1.12
USP46-207ENST00000508499 ZNF551Q7Z340 670 aaPredicted RBP8.04□□□□□ -1.12
USP46-207ENST00000508499 ARPINQ7Z6K5 226 aa8.04□□□□□ -1.12
USP46-207ENST00000508499 YTHDF3Q7Z739 585 aaKnown RBP8.04□□□□□ -1.12
USP46-207ENST00000508499 SNX32Q86XE0 403 aa8.04□□□□□ -1.12
USP46-207ENST00000508499 PROSER1Q86XN7 944 aa8.04□□□□□ -1.12
USP46-207ENST00000508499 APLFQ8IW19 511 aaPredicted RBP8.04□□□□□ -1.12
USP46-207ENST00000508499 LGI4Q8N135 537 aa8.04□□□□□ -1.12
USP46-207ENST00000508499 TMEM102Q8N9M5 508 aaPredicted RBP8.04□□□□□ -1.12
USP46-207ENST00000508499 OR7G2Q8NG99 324 aa8.04□□□□□ -1.12
USP46-207ENST00000508499 OR8J3Q8NGG0 315 aa8.04□□□□□ -1.12
USP46-207ENST00000508499 OR56A1Q8NGH5 318 aa8.04□□□□□ -1.12
USP46-207ENST00000508499 OR9A2Q8NGT5 310 aa8.04□□□□□ -1.12
USP46-207ENST00000508499 NUBPLQ8TB37 319 aa8.04□□□□□ -1.12
USP46-207ENST00000508499 SLC2A12Q8TD20 617 aa8.04□□□□□ -1.12
USP46-207ENST00000508499 ZFP90Q8TF47 636 aa8.04□□□□□ -1.12
USP46-207ENST00000508499 NUDT8Q8WV74 236 aa8.04□□□□□ -1.12
USP46-207ENST00000508499 FAM120BQ96EK7 910 aaKnown RBP8.04□□□□□ -1.12
USP46-207ENST00000508499 GIMAP5Q96F15 307 aa8.04□□□□□ -1.12
USP46-207ENST00000508499 VMP1Q96GC9 406 aa8.04□□□□□ -1.12
USP46-207ENST00000508499 NSL1Q96IY1 281 aa8.04□□□□□ -1.12
USP46-207ENST00000508499 FER1L6-AS2Q96M78 137 aa8.04□□□□□ -1.12
USP46-207ENST00000508499 MS4A4EQ96PG1 132 aa8.04□□□□□ -1.12
USP46-207ENST00000508499 SH3GL1Q99961 368 aa8.04□□□□□ -1.12
USP46-207ENST00000508499 HOPXQ9BPY8 73 aaPredicted RBP8.04□□□□□ -1.12
USP46-207ENST00000508499 GPATCH1Q9BRR8 931 aaKnown RBP8.04□□□□□ -1.12
USP46-207ENST00000508499 CXorf36Q9H7Y0 433 aa8.04□□□□□ -1.12
USP46-207ENST00000508499 GID8Q9NWU2 228 aa8.04□□□□□ -1.12
USP46-207ENST00000508499 THUMPD1Q9NXG2 353 aaKnown RBP8.04□□□□□ -1.12
USP46-207ENST00000508499 P4HTMQ9NXG6 502 aa8.04□□□□□ -1.12
USP46-207ENST00000508499 VPS4AQ9UN37 437 aa8.04□□□□□ -1.12
USP46-207ENST00000508499 CORO2BQ9UQ03 480 aa8.04□□□□□ -1.12
USP46-207ENST00000508499 AP3M1Q9Y2T2 418 aa8.04□□□□□ -1.12
USP46-207ENST00000508499 CEP295Q9C0D2 2601 aa8.04□□□□□ -1.12
USP46-207ENST00000508499 NSG1A0A0A6YYJ2 146 aa8.03□□□□□ -1.12
USP46-207ENST00000508499 MED19A0JLT2 244 aaPredicted RBP8.03□□□□□ -1.12
USP46-207ENST00000508499 PEX12O00623 359 aa8.03□□□□□ -1.12
USP46-207ENST00000508499 MRASO14807 208 aa8.03□□□□□ -1.12
USP46-207ENST00000508499 RRP8O43159 456 aaKnown RBP8.03□□□□□ -1.12
USP46-207ENST00000508499 EFSO43281 561 aa8.03□□□□□ -1.12
USP46-207ENST00000508499 UNC5CO95185 931 aa8.03□□□□□ -1.12
USP46-207ENST00000508499 AVPP01185 164 aa8.03□□□□□ -1.12
USP46-207ENST00000508499 IFNA16P05015 189 aa8.03□□□□□ -1.12
USP46-207ENST00000508499 KRT16P08779 473 aa8.03□□□□□ -1.12
USP46-207ENST00000508499 CT62P0C5K7 136 aa8.03□□□□□ -1.12
USP46-207ENST00000508499 CCT3P49368 545 aaKnown RBP8.03□□□□□ -1.12
USP46-207ENST00000508499 EMDP50402 254 aa8.03□□□□□ -1.12
USP46-207ENST00000508499 CDK9P50750 372 aaKnown RBP8.03□□□□□ -1.12
USP46-207ENST00000508499 MVDP53602 400 aa8.03□□□□□ -1.12
USP46-207ENST00000508499 DCAF7P61962 342 aa8.03□□□□□ -1.12
USP46-207ENST00000508499 RPS18P62269 152 aaKnown RBP8.03□□□□□ -1.12
USP46-207ENST00000508499 AIMP2Q13155 320 aaKnown RBP8.03□□□□□ -1.12
USP46-207ENST00000508499 MYBPC3Q14896 1274 aa8.03□□□□□ -1.12
USP46-207ENST00000508499 ZNF750Q32MQ0 723 aa8.03□□□□□ -1.12
USP46-207ENST00000508499 MMEL1Q495T6 779 aa8.03□□□□□ -1.12
USP46-207ENST00000508499 DCAF10Q5QP82 559 aa8.03□□□□□ -1.12
USP46-207ENST00000508499 REP15Q6BDI9 236 aa8.03□□□□□ -1.12
USP46-207ENST00000508499 SLC2A7Q6PXP3 512 aa8.03□□□□□ -1.12
USP46-207ENST00000508499 DGAT2L6Q6ZPD8 337 aa8.03□□□□□ -1.12
USP46-207ENST00000508499 SHISA6Q6ZSJ9 500 aa8.03□□□□□ -1.12
USP46-207ENST00000508499 SPACA3Q8IXA5 215 aa8.03□□□□□ -1.12
USP46-207ENST00000508499 MSRB3Q8IXL7 192 aa8.03□□□□□ -1.12
USP46-207ENST00000508499 PRSS58Q8IYP2 241 aa8.03□□□□□ -1.12
USP46-207ENST00000508499 CLECL1Q8IZS7 167 aa8.03□□□□□ -1.12
USP46-207ENST00000508499 ARHGAP24Q8N264 748 aa8.03□□□□□ -1.12
USP46-207ENST00000508499 CDRT4Q8N9R6 151 aa8.03□□□□□ -1.12
USP46-207ENST00000508499 ZSCAN1Q8NBB4 408 aa8.03□□□□□ -1.12
USP46-207ENST00000508499 OR4A15Q8NGL6 344 aa8.03□□□□□ -1.12
USP46-207ENST00000508499 TP53INP1Q96A56 240 aa8.03□□□□□ -1.12
USP46-207ENST00000508499 LRRC58Q96CX6 371 aa8.03□□□□□ -1.12
USP46-207ENST00000508499 VSTM2LQ96N03 204 aa8.03□□□□□ -1.12
USP46-207ENST00000508499 ANKRD27Q96NW4 1050 aa8.03□□□□□ -1.12
USP46-207ENST00000508499 STACQ99469 402 aa8.03□□□□□ -1.12
USP46-207ENST00000508499 CGREF1Q99674 301 aa8.03□□□□□ -1.12
USP46-207ENST00000508499 USB1Q9BQ65 265 aaKnown RBP8.03□□□□□ -1.12
USP46-207ENST00000508499 LMF2Q9BU23 707 aaKnown RBP8.03□□□□□ -1.12
USP46-207ENST00000508499 SPATA9Q9BWV2 254 aa8.03□□□□□ -1.12
USP46-207ENST00000508499 OR10A5Q9H207 317 aa8.03□□□□□ -1.12
USP46-207ENST00000508499 RAD21L1Q9H4I0 556 aa8.03□□□□□ -1.12
USP46-207ENST00000508499 DUSP22Q9NRW4 184 aa8.03□□□□□ -1.12
USP46-207ENST00000508499 ARL8BQ9NVJ2 186 aa8.03□□□□□ -1.12
USP46-207ENST00000508499 GPATCH2Q9NW75 528 aa8.03□□□□□ -1.12
USP46-207ENST00000508499 SLC25A37Q9NYZ2 338 aa8.03□□□□□ -1.12
USP46-207ENST00000508499 VAPAQ9P0L0 249 aa8.03□□□□□ -1.12
USP46-207ENST00000508499 ABCD2Q9UBJ2 740 aa8.03□□□□□ -1.12
USP46-207ENST00000508499 COPS7AQ9UBW8 275 aa8.03□□□□□ -1.12
USP46-207ENST00000508499 PRODH2Q9UF12 536 aa8.03□□□□□ -1.12
USP46-207ENST00000508499 ZNF451Q9Y4E5 1061 aa8.03□□□□□ -1.12
USP46-207ENST00000508499 PCDHB14Q9Y5E9 798 aa8.03□□□□□ -1.12
USP46-207ENST00000508499 DMXL2Q8TDJ6 3036 aa8.03□□□□□ -1.12
USP46-207ENST00000508499 ZFHX4Q86UP3 3567 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms