RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 SLC35E2BP0CK96 405 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 OSMP13725 252 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 EZRP15311 586 aaKnown RBP4.26□□□□□ -1.73
NUP54-206ENST00000508465 CD1DP15813 335 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 STMN1P16949 149 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 IL1RNP18510 177 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 MMP11P24347 488 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 SPRP35270 261 aaPredicted RBP4.26□□□□□ -1.73
NUP54-206ENST00000508465 GP5P40197 560 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 SLC26A3P40879 764 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 EFNA3P52797 238 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 AP1S2P56377 157 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 RAB8AP61006 207 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 RAB10P61026 200 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 RPS15AP62244 130 aaKnown RBP4.26□□□□□ -1.73
NUP54-206ENST00000508465 OLR1P78380 273 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 RELAQ04206 551 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 EEF1A2Q05639 463 aaKnown RBP4.26□□□□□ -1.73
NUP54-206ENST00000508465 SLMAPQ14BN4 828 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 TBCCQ15814 346 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 RBBP7Q16576 425 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 PPP1R3AQ16821 1122 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 MIDNQ504T8 468 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 PRR30Q53SZ7 412 aaPredicted RBP4.26□□□□□ -1.73
NUP54-206ENST00000508465 DCAF10Q5QP82 559 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 MFSD4BQ5TF39 518 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 ATG9BQ674R7 924 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 LRRC8EQ6NSJ5 796 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 PRMT9Q6P2P2 845 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 LINC00696Q6ZRV3 163 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 FRA10AC1Q70Z53 315 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 CYS1Q717R9 158 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 ASPGQ86U10 573 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 ISCA2Q86U28 154 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 CTAGE4Q8IX94 777 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 GALNT16Q8N428 558 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 SNX31Q8N9S9 440 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 MFSD9Q8NBP5 474 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 MNS1Q8NEH6 495 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 ABHD11Q8NFV4 315 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 OR11G2Q8NGC1 345 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 OR5T3Q8NGG3 340 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 OR51Q1Q8NH59 317 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 KIF18AQ8NI77 898 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 KCTD4Q8WVF5 259 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 SLC5A11Q8WWX8 675 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 ATL1Q8WXF7 558 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 CDKL2Q92772 493 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 RHBDF1Q96CC6 855 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 TRIM44Q96DX7 344 aaPredicted RBP4.26□□□□□ -1.73
NUP54-206ENST00000508465 TM4SF19Q96DZ7 209 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 C19orf60Q96EN9 201 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 CYTH2Q99418 400 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 GPR22Q99680 433 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 RBBP8Q99708 897 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 C17orf62Q9BQA9 187 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 RHOXF2Q9BQY4 288 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 HAUS8Q9BT25 410 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 ACTRT3Q9BYD9 372 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 AMBRA1Q9C0C7 1298 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 DERL2Q9GZP9 239 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 AICDAQ9GZX7 198 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 DRC3Q9H069 523 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 PCBD2Q9H0N5 130 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 WDR54Q9H977 334 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 ZNF160Q9HCG1 818 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 C14orf119Q9NWQ9 140 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 NSMCE4AQ9NXX6 385 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 GPR83Q9NYM4 423 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 CD274Q9NZQ7 290 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 ZNF282Q9UDV7 671 aaPredicted RBP4.26□□□□□ -1.73
NUP54-206ENST00000508465 TUBD1Q9UJT1 453 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 ZNF490Q9ULM2 529 aaPredicted RBP4.26□□□□□ -1.73
NUP54-206ENST00000508465 NFU1Q9UMS0 254 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 CDC14AQ9UNH5 594 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 NAALAD2Q9Y3Q0 740 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 OARD1Q9Y530 152 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 CSAG2Q9Y5P2 127 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 HELZ2Q9BYK8 2649 aaKnown RBP4.26□□□□□ -1.73
NUP54-206ENST00000508465 FER1L5A0AVI2 2057 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 RELNP78509 3460 aa4.26□□□□□ -1.73
NUP54-206ENST00000508465 FLNCQ14315 2725 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 HEATR5BQ9P2D3 2071 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 IGKV2D-30A0A075B6S6 120 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 A8MUA0 341 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 A8MUI8 341 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 SUPT3HB4E1H0 165 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 AGPSO00116 658 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 TXNDC9O14530 226 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 NDUFS4O43181 175 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 CHST10O43529 356 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 CCNT2O60583 730 aaKnown RBP4.25□□□□□ -1.73
NUP54-206ENST00000508465 B4GALT2O60909 372 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 SUPT3HO75486 399 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 CDC123O75794 336 aaPredicted RBP4.25□□□□□ -1.73
NUP54-206ENST00000508465 CEACAM4O75871 244 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 C2P06681 752 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 CD63P08962 238 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 C1GALT1C1LP0DN25 315 aa4.25□□□□□ -1.73
NUP54-206ENST00000508465 EPORP19235 508 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms