RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 SLC22A6Q4U2R8 563 aa2.12□□□□□ -2.07
GYPB-207ENST00000506679 HERC4Q5GLZ8 1057 aaPredicted RBP2.12□□□□□ -2.07
GYPB-207ENST00000506679 SEL1L2Q5TEA6 688 aa2.12□□□□□ -2.07
GYPB-207ENST00000506679 HIST2H2AA3Q6FI13 130 aa2.12□□□□□ -2.07
GYPB-207ENST00000506679 MFSD7Q6UXD7 560 aa2.12□□□□□ -2.07
GYPB-207ENST00000506679 GCNT7Q6ZNI0 430 aa2.12□□□□□ -2.07
GYPB-207ENST00000506679 STOX1Q6ZVD7 989 aa2.12□□□□□ -2.07
GYPB-207ENST00000506679 RAPH1Q70E73 1250 aa2.12□□□□□ -2.07
GYPB-207ENST00000506679 COLGALT1Q8NBJ5 622 aa2.12□□□□□ -2.07
GYPB-207ENST00000506679 RAB3CQ96E17 227 aa2.12□□□□□ -2.07
GYPB-207ENST00000506679 ATP6V0BQ99437 205 aa2.12□□□□□ -2.07
GYPB-207ENST00000506679 FAM173AQ9BQD7 235 aa2.12□□□□□ -2.07
GYPB-207ENST00000506679 TRIM9Q9C026 710 aa2.12□□□□□ -2.07
GYPB-207ENST00000506679 ADGRL4Q9HBW9 690 aa2.12□□□□□ -2.07
GYPB-207ENST00000506679 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.12□□□□□ -2.073e-6■■□□□ 13.8
GYPB-207ENST00000506679 CENPMQ9NSP4 180 aa2.12□□□□□ -2.07
GYPB-207ENST00000506679 RAI14Q9P0K7 980 aa2.12□□□□□ -2.07
GYPB-207ENST00000506679 MTRRQ9UBK8 725 aa2.12□□□□□ -2.07
GYPB-207ENST00000506679 Q9UF83 564 aa2.12□□□□□ -2.07
GYPB-207ENST00000506679 IKZF3Q9UKT9 509 aa2.12□□□□□ -2.07
GYPB-207ENST00000506679 VSIG4Q9Y279 399 aa2.12□□□□□ -2.07
GYPB-207ENST00000506679 ZMYM6O95789 1325 aa2.12□□□□□ -2.07
GYPB-207ENST00000506679 CFAP65Q6ZU64 1925 aaKnown RBP2.11□□□□□ -2.07
GYPB-207ENST00000506679 IGHV3-35A0A0C4DH35 117 aa2.11□□□□□ -2.07
GYPB-207ENST00000506679 TRBV2A0A0J9YWF9 115 aa2.11□□□□□ -2.07
GYPB-207ENST00000506679 MACROD2A1Z1Q3 448 aa2.11□□□□□ -2.07
GYPB-207ENST00000506679 PDLIM1O00151 329 aa2.11□□□□□ -2.07
GYPB-207ENST00000506679 RHBDL1O75783 438 aa2.11□□□□□ -2.07
GYPB-207ENST00000506679 NUDT14O95848 222 aa2.11□□□□□ -2.07
GYPB-207ENST00000506679 WNT2P09544 360 aa2.11□□□□□ -2.07
GYPB-207ENST00000506679 HMOX1P09601 288 aa2.11□□□□□ -2.07
GYPB-207ENST00000506679 HIST1H2AGP0C0S8 130 aaPredicted RBP2.11□□□□□ -2.07
GYPB-207ENST00000506679 UMPSP11172 480 aa2.11□□□□□ -2.07
GYPB-207ENST00000506679 ATP6V1B1P15313 513 aa2.11□□□□□ -2.07
GYPB-207ENST00000506679 ZNF18P17022 549 aa2.11□□□□□ -2.07
GYPB-207ENST00000506679 SAA4P35542 130 aa2.11□□□□□ -2.07
GYPB-207ENST00000506679 HMGCLP35914 325 aa2.11□□□□□ -2.07
GYPB-207ENST00000506679 NPY2RP49146 381 aa2.11□□□□□ -2.07
GYPB-207ENST00000506679 MEOX2P50222 304 aa2.11□□□□□ -2.07
GYPB-207ENST00000506679 NLRP11P59045 1033 aaKnown RBP2.11□□□□□ -2.07
GYPB-207ENST00000506679 CXCL6P80162 114 aa2.11□□□□□ -2.07
GYPB-207ENST00000506679 ZNF33BQ06732 778 aa2.11□□□□□ -2.07
GYPB-207ENST00000506679 MICAQ29983 383 aa2.11□□□□□ -2.07
GYPB-207ENST00000506679 MS4A13Q5J8X5 152 aa2.11□□□□□ -2.07
GYPB-207ENST00000506679 OLFML2AQ68BL7 652 aa2.11□□□□□ -2.07
GYPB-207ENST00000506679 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.11□□□□□ -2.07
GYPB-207ENST00000506679 C11orf53Q8IXP5 236 aa2.11□□□□□ -2.07
GYPB-207ENST00000506679 PEX5LQ8IYB4 626 aa2.11□□□□□ -2.07
GYPB-207ENST00000506679 C11orf42Q8N5U0 333 aa2.11□□□□□ -2.07
GYPB-207ENST00000506679 SPC24Q8NBT2 197 aa2.11□□□□□ -2.07
GYPB-207ENST00000506679 FNDC8Q8TC99 324 aa2.11□□□□□ -2.07
GYPB-207ENST00000506679 HIST1H2ACQ93077 130 aa2.11□□□□□ -2.07
GYPB-207ENST00000506679 PPP1R16AQ96I34 528 aa2.11□□□□□ -2.07
GYPB-207ENST00000506679 SIGLEC12Q96PQ1 595 aa2.11□□□□□ -2.07
GYPB-207ENST00000506679 NAP1L3Q99457 506 aaPredicted RBP2.11□□□□□ -2.07
GYPB-207ENST00000506679 PAXXQ9BUH6 204 aa2.11□□□□□ -2.07
GYPB-207ENST00000506679 IMPAD1Q9NX62 359 aa2.11□□□□□ -2.07
GYPB-207ENST00000506679 ERVK-18Q9QC07 812 aa2.11□□□□□ -2.07
GYPB-207ENST00000506679 ABCD2Q9UBJ2 740 aa2.11□□□□□ -2.07
GYPB-207ENST00000506679 MIOXQ9UGB7 285 aa2.11□□□□□ -2.07
GYPB-207ENST00000506679 ENTPD4Q9Y227 616 aa2.11□□□□□ -2.07
GYPB-207ENST00000506679 ZNF175Q9Y473 711 aa2.11□□□□□ -2.07
GYPB-207ENST00000506679 PRRC2AP48634 2157 aaKnown RBP2.1□□□□□ -2.07
GYPB-207ENST00000506679 RAD54L2Q9Y4B4 1467 aa2.1□□□□□ -2.07
GYPB-207ENST00000506679 CCDC69A6NI79 296 aa2.1□□□□□ -2.07
GYPB-207ENST00000506679 CCT8L1PA6NM43 557 aa2.1□□□□□ -2.07
GYPB-207ENST00000506679 BUB1O43683 1085 aa2.1□□□□□ -2.07
GYPB-207ENST00000506679 TYROBPO43914 113 aa2.1□□□□□ -2.07
GYPB-207ENST00000506679 ATP6V1G1O75348 118 aa2.1□□□□□ -2.07
GYPB-207ENST00000506679 PDE5AO76074 875 aa2.1□□□□□ -2.07
GYPB-207ENST00000506679 TOXO94900 526 aa2.1□□□□□ -2.07
GYPB-207ENST00000506679 GJB5O95377 273 aa2.1□□□□□ -2.07
GYPB-207ENST00000506679 SYNGR4O95473 234 aa2.1□□□□□ -2.07
GYPB-207ENST00000506679 ECDO95905 644 aaPredicted RBP2.1□□□□□ -2.07
GYPB-207ENST00000506679 CXCL10P02778 98 aa2.1□□□□□ -2.07
GYPB-207ENST00000506679 HOXB7P09629 217 aa2.1□□□□□ -2.07
GYPB-207ENST00000506679 DUX4L4P0CJ87 422 aa2.1□□□□□ -2.07
GYPB-207ENST00000506679 LAMP1P11279 417 aa2.1□□□□□ -2.07
GYPB-207ENST00000506679 PVRP15151 417 aa2.1□□□□□ -2.07
GYPB-207ENST00000506679 ACP1P24666 158 aa2.1□□□□□ -2.07
GYPB-207ENST00000506679 MARCKSP29966 332 aaPredicted RBP2.1□□□□□ -2.07
GYPB-207ENST00000506679 CHRNA3P32297 505 aa2.1□□□□□ -2.07
GYPB-207ENST00000506679 MDH2P40926 338 aaKnown RBP2.1□□□□□ -2.07
GYPB-207ENST00000506679 SGSHP51688 502 aa2.1□□□□□ -2.07
GYPB-207ENST00000506679 HNRNPFP52597 415 aaKnown RBP2.1□□□□□ -2.07
GYPB-207ENST00000506679 SSTP61278 116 aa2.1□□□□□ -2.07
GYPB-207ENST00000506679 HAND2P61296 217 aa2.1□□□□□ -2.07
GYPB-207ENST00000506679 CLPPQ16740 277 aaPredicted RBP2.1□□□□□ -2.07
GYPB-207ENST00000506679 ZSWIM7Q19AV6 140 aa2.1□□□□□ -2.07
GYPB-207ENST00000506679 ZNF699Q32M78 642 aa2.1□□□□□ -2.07
GYPB-207ENST00000506679 CNPY1Q3B7I2 92 aa2.1□□□□□ -2.07
GYPB-207ENST00000506679 TCHHL1Q5QJ38 904 aaPredicted RBP2.1□□□□□ -2.07
GYPB-207ENST00000506679 APOOLQ6UXV4 268 aa2.1□□□□□ -2.07
GYPB-207ENST00000506679 TOM1L2Q6ZVM7 507 aa2.1□□□□□ -2.07
GYPB-207ENST00000506679 C1orf186Q6ZWK4 172 aa2.1□□□□□ -2.07
GYPB-207ENST00000506679 YRDCQ86U90 279 aaKnown RBP2.1□□□□□ -2.07
GYPB-207ENST00000506679 LUZP1Q86V48 1076 aa2.1□□□□□ -2.07
GYPB-207ENST00000506679 RANBP3LQ86VV4 465 aaPredicted RBP2.1□□□□□ -2.07
GYPB-207ENST00000506679 ZBED8Q8IZ13 594 aa2.1□□□□□ -2.07
GYPB-207ENST00000506679 GPR137CQ8N3F9 429 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms