RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 A0A0U1RRA0 63 aa3.08□□□□□ -1.92
TOPBP1-204ENST00000505804 CCT8L1PA6NM43 557 aa3.08□□□□□ -1.92
TOPBP1-204ENST00000505804 SAP18O00422 153 aaKnown RBP3.08□□□□□ -1.92
TOPBP1-204ENST00000505804 CYB561D2O14569 222 aa3.08□□□□□ -1.92
TOPBP1-204ENST00000505804 RANBP6O60518 1105 aaKnown RBP3.08□□□□□ -1.92
TOPBP1-204ENST00000505804 BCAS2O75934 225 aaPredicted RBP3.08□□□□□ -1.92
TOPBP1-204ENST00000505804 GOT2P00505 430 aaKnown RBP3.08□□□□□ -1.92
TOPBP1-204ENST00000505804 THY1P04216 161 aa3.08□□□□□ -1.92
TOPBP1-204ENST00000505804 GNSP15586 552 aa3.08□□□□□ -1.92
TOPBP1-204ENST00000505804 SAA4P35542 130 aa3.08□□□□□ -1.92
TOPBP1-204ENST00000505804 CCL11P51671 97 aa3.08□□□□□ -1.92
TOPBP1-204ENST00000505804 ARHGDIAP52565 204 aa3.08□□□□□ -1.92
TOPBP1-204ENST00000505804 BTG3Q14201 252 aaPredicted RBP3.08□□□□□ -1.92
TOPBP1-204ENST00000505804 ZKSCAN8Q15776 578 aaPredicted RBP3.08□□□□□ -1.92
TOPBP1-204ENST00000505804 SHROOM1Q2M3G4 852 aaPredicted RBP3.08□□□□□ -1.92
TOPBP1-204ENST00000505804 HERC4Q5GLZ8 1057 aaPredicted RBP3.08□□□□□ -1.92
TOPBP1-204ENST00000505804 LINC00242Q5T6M2 205 aa3.08□□□□□ -1.92
TOPBP1-204ENST00000505804 TAF3Q5VWG9 929 aa3.08□□□□□ -1.92
TOPBP1-204ENST00000505804 VITQ6UXI7 678 aa3.08□□□□□ -1.92
TOPBP1-204ENST00000505804 NAXDQ8IW45 347 aa3.08□□□□□ -1.92
TOPBP1-204ENST00000505804 PYROXD2Q8N2H3 581 aa3.08□□□□□ -1.92
TOPBP1-204ENST00000505804 ARL14Q8N4G2 192 aa3.08□□□□□ -1.92
TOPBP1-204ENST00000505804 LEMD2Q8NC56 503 aa3.08□□□□□ -1.92
TOPBP1-204ENST00000505804 ZPLD1Q8TCW7 415 aa3.08□□□□□ -1.92
TOPBP1-204ENST00000505804 TMEM45BQ96B21 275 aa3.08□□□□□ -1.92
TOPBP1-204ENST00000505804 RANBP9Q96S59 729 aa3.08□□□□□ -1.92
TOPBP1-204ENST00000505804 CPXM1Q96SM3 734 aa3.08□□□□□ -1.92
TOPBP1-204ENST00000505804 COQ7Q99807 217 aa3.08□□□□□ -1.92
TOPBP1-204ENST00000505804 GPR174Q9BXC1 333 aa3.08□□□□□ -1.92
TOPBP1-204ENST00000505804 AMBNQ9NP70 447 aa3.08□□□□□ -1.92
TOPBP1-204ENST00000505804 LHX3Q9UBR4 397 aa3.08□□□□□ -1.92
TOPBP1-204ENST00000505804 NAALAD2Q9Y3Q0 740 aa3.08□□□□□ -1.92
TOPBP1-204ENST00000505804 KNSTRNQ9Y448 316 aa3.08□□□□□ -1.92
TOPBP1-204ENST00000505804 ZNF175Q9Y473 711 aa3.08□□□□□ -1.92
TOPBP1-204ENST00000505804 AGRNO00468 2067 aa3.07□□□□□ -1.92
TOPBP1-204ENST00000505804 IGLV3-10A0A075B6K4 115 aa3.07□□□□□ -1.92
TOPBP1-204ENST00000505804 A0A1W2PQ72 361 aa3.07□□□□□ -1.92
TOPBP1-204ENST00000505804 TMEM89A2RUT3 159 aa3.07□□□□□ -1.92
TOPBP1-204ENST00000505804 SLC9B1P1A6NJY1 282 aa3.07□□□□□ -1.92
TOPBP1-204ENST00000505804 EI24O14681 340 aa3.07□□□□□ -1.92
TOPBP1-204ENST00000505804 BAG2O95816 211 aa3.07□□□□□ -1.92
TOPBP1-204ENST00000505804 NUDT14O95848 222 aa3.07□□□□□ -1.92
TOPBP1-204ENST00000505804 MT-ND3P03897 115 aa3.07□□□□□ -1.92
TOPBP1-204ENST00000505804 VCPP55072 806 aaKnown RBP3.07□□□□□ -1.92
TOPBP1-204ENST00000505804 CASP9P55211 416 aa3.07□□□□□ -1.92
TOPBP1-204ENST00000505804 SSTP61278 116 aa3.07□□□□□ -1.92
TOPBP1-204ENST00000505804 NAAAQ02083 359 aa3.07□□□□□ -1.92
TOPBP1-204ENST00000505804 RUNX3Q13761 415 aa3.07□□□□□ -1.92
TOPBP1-204ENST00000505804 CD226Q15762 336 aa3.07□□□□□ -1.92
TOPBP1-204ENST00000505804 Q1RN00 199 aa3.07□□□□□ -1.92
TOPBP1-204ENST00000505804 TIMM50Q3ZCQ8 353 aa3.07□□□□□ -1.92
TOPBP1-204ENST00000505804 ATAD3CQ5T2N8 411 aa3.07□□□□□ -1.92
TOPBP1-204ENST00000505804 SEL1L2Q5TEA6 688 aa3.07□□□□□ -1.92
TOPBP1-204ENST00000505804 MFSD7Q6UXD7 560 aa3.07□□□□□ -1.92
TOPBP1-204ENST00000505804 CCBE1Q6UXH8 406 aaPredicted RBP3.07□□□□□ -1.92
TOPBP1-204ENST00000505804 ADAMTSL5Q6ZMM2 481 aa3.07□□□□□ -1.92
TOPBP1-204ENST00000505804 PRSS48Q7RTY5 328 aa3.07□□□□□ -1.92
TOPBP1-204ENST00000505804 ADGRD2Q7Z7M1 963 aa3.07□□□□□ -1.92
TOPBP1-204ENST00000505804 ADCK1Q86TW2 530 aa3.07□□□□□ -1.92
TOPBP1-204ENST00000505804 YRDCQ86U90 279 aaKnown RBP3.07□□□□□ -1.92
TOPBP1-204ENST00000505804 SERINC5Q86VE9 423 aa3.07□□□□□ -1.92
TOPBP1-204ENST00000505804 SPEM1Q8N4L4 309 aa3.07□□□□□ -1.92
TOPBP1-204ENST00000505804 OR52E1Q8NGJ3 308 aa3.07□□□□□ -1.92
TOPBP1-204ENST00000505804 ZBED6CLQ96FA7 236 aaPredicted RBP3.07□□□□□ -1.92
TOPBP1-204ENST00000505804 C19orf43Q9BQ61 176 aa3.07□□□□□ -1.92
TOPBP1-204ENST00000505804 CBWD1Q9BRT8 395 aa3.07□□□□□ -1.92
TOPBP1-204ENST00000505804 SIRPDQ9H106 197 aa3.07□□□□□ -1.92
TOPBP1-204ENST00000505804 HOMER3Q9NSC5 361 aa3.07□□□□□ -1.92
TOPBP1-204ENST00000505804 MIOXQ9UGB7 285 aa3.07□□□□□ -1.92
TOPBP1-204ENST00000505804 CIDEBQ9UHD4 219 aa3.07□□□□□ -1.92
TOPBP1-204ENST00000505804 DNPEPQ9ULA0 475 aa3.07□□□□□ -1.92
TOPBP1-204ENST00000505804 RPGRIP1LQ68CZ1 1315 aa3.07□□□□□ -1.92
TOPBP1-204ENST00000505804 IGHV3OR16-12A0A075B7B8 117 aa3.06□□□□□ -1.92
TOPBP1-204ENST00000505804 NPIPA5A0A0B4J1W7 369 aa3.06□□□□□ -1.92
TOPBP1-204ENST00000505804 A0A0J9YVX5 310 aa3.06□□□□□ -1.92
TOPBP1-204ENST00000505804 TRABD2BA6NFA1 517 aa3.06□□□□□ -1.92
TOPBP1-204ENST00000505804 NPIPA5E9PKD4 350 aa3.06□□□□□ -1.92
TOPBP1-204ENST00000505804 ARPC1BO15143 372 aaKnown RBP3.06□□□□□ -1.92
TOPBP1-204ENST00000505804 CFLARO15519 480 aa3.06□□□□□ -1.92
TOPBP1-204ENST00000505804 TYROBPO43914 113 aa3.06□□□□□ -1.92
TOPBP1-204ENST00000505804 RHBDL1O75783 438 aa3.06□□□□□ -1.92
TOPBP1-204ENST00000505804 PDE5AO76074 875 aa3.06□□□□□ -1.92
TOPBP1-204ENST00000505804 ZMYM6O95789 1325 aa3.06□□□□□ -1.92
TOPBP1-204ENST00000505804 ECDO95905 644 aaPredicted RBP3.06□□□□□ -1.92
TOPBP1-204ENST00000505804 PROS1P07225 676 aa3.06□□□□□ -1.92
TOPBP1-204ENST00000505804 GSTA1P08263 222 aa3.06□□□□□ -1.92
TOPBP1-204ENST00000505804 UMPSP11172 480 aa3.06□□□□□ -1.92
TOPBP1-204ENST00000505804 VDRP11473 427 aa3.06□□□□□ -1.92
TOPBP1-204ENST00000505804 AHCYP23526 432 aa3.06□□□□□ -1.92
TOPBP1-204ENST00000505804 SGSHP51688 502 aa3.06□□□□□ -1.92
TOPBP1-204ENST00000505804 HAND2P61296 217 aa3.06□□□□□ -1.92
TOPBP1-204ENST00000505804 PPP1R3AQ16821 1122 aa3.06□□□□□ -1.92
TOPBP1-204ENST00000505804 ZNF528Q3MIS6 628 aa3.06□□□□□ -1.92
TOPBP1-204ENST00000505804 LIPKQ5VXJ0 399 aa3.06□□□□□ -1.92
TOPBP1-204ENST00000505804 ATRAIDQ6UW56 229 aa3.06□□□□□ -1.92
TOPBP1-204ENST00000505804 CWC27Q6UX04 472 aaKnown RBP3.06□□□□□ -1.92
TOPBP1-204ENST00000505804 WDR88Q6ZMY6 472 aa3.06□□□□□ -1.92
TOPBP1-204ENST00000505804 DPY19L2P2Q6ZN68 376 aa3.06□□□□□ -1.92
TOPBP1-204ENST00000505804 C1orf186Q6ZWK4 172 aa3.06□□□□□ -1.92
TOPBP1-204ENST00000505804 BATF2Q8N1L9 274 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms