RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 HSPBAP1Q96EW2 488 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 PTCHD1Q96NR3 888 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 MS4A4EQ96PG1 132 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 TMEM38AQ9H6F2 299 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 A4GALTQ9NPC4 353 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 PSME2Q9UL46 239 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 PCDHGA10Q9Y5H3 936 aa7.68□□□□□ -1.18
CDC42SE2-208ENST00000505065 FCHO1O14526 889 aa7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 EMC8O43402 210 aa7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 DIAPH2O60879 1101 aa7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 ERN1O75460 977 aaKnown RBP7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 C1QCP02747 245 aa7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 KIR3DL1P43629 444 aa7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 RRADP55042 308 aa7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 PLAURQ03405 335 aa7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 MFAP5Q13361 173 aa7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 NSDHLQ15738 373 aa7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 PAPD4Q6PIY7 484 aaKnown RBP7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 FITM2Q8N6M3 262 aa7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 RIT1Q92963 219 aa7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 SENP5Q96HI0 755 aaPredicted RBP7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 DGAT2Q96PD7 388 aa7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 DPY30Q9C005 99 aa7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 OR10A5Q9H207 317 aa7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 HEMK1Q9Y5R4 338 aaPredicted RBP7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 USP24Q9UPU5 2620 aa7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 GNG14A0A1W2PPG7 69 aa7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 C17orf105B2RV13 164 aa7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 B4DXG7 233 aa7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 PRAMEF2O60811 474 aa7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 SORBS2O94875 1100 aaKnown RBP7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 ACP2P11117 423 aa7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 OR4D2P58180 307 aa7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 FAM174BQ3ZCQ3 159 aa7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 TRMT12Q53H54 448 aaKnown RBP7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 ANKRD46Q86W74 232 aa7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 METTL25Q8N6Q8 603 aa7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 EFCAB3Q8N7B9 438 aa7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 OR8J3Q8NGG0 315 aa7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 HAS2Q92819 552 aa7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 NCLNQ969V3 563 aa7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 KLHL29Q96CT2 875 aa7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 VPS50Q96JG6 964 aa7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 INPP5KQ9BT40 448 aa7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 IL1RL2Q9HB29 575 aa7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 FOLH1BQ9HBA9 442 aa7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 ARHGAP21Q5T5U3 1957 aa7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 ERVH48-1M5A8F1 160 aa7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 PCBP3P57721 371 aaKnown RBP7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 ZNF324BQ6AW86 544 aaPredicted RBP7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 OR4F3Q6IEY1 312 aa7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 GALNT12Q8IXK2 581 aa7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 OR56A1Q8NGH5 318 aa7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 C16orf52Q8NHV5 167 aa7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 ZFP28Q8NHY6 868 aa7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 CNTNAP3BQ96NU0 1288 aa7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 MFRPQ9BY79 579 aa7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 CNTNAP3Q9BZ76 1288 aa7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 CNOT11Q9UKZ1 510 aaKnown RBP7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 NTNG1Q9Y2I2 539 aa7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 ZNF780BQ9Y6R6 833 aa7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 MED13Q9UHV7 2174 aa7.67□□□□□ -1.18
CDC42SE2-208ENST00000505065 A0A1W2PQD3 144 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 CFLARO15519 480 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 RRP8O43159 456 aaKnown RBP7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 UBAP2LQ14157 1087 aaKnown RBP7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 INAQ16352 499 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 ATP1A1-AS1Q5TC04 95 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 GOLM1Q8NBJ4 401 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 APOBEC4Q8WW27 367 aaKnown RBP7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 SLC35B4Q969S0 331 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 SPDL1Q96EA4 605 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 CD300AQ9UGN4 299 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 CELSR3Q9NYQ7 3312 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 A0A1W2PRB8 838 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 KLK10O43240 276 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 SNRPB2P08579 225 aaKnown RBP7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 VIMP08670 466 aaKnown RBP7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 RHDQ02161 417 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 TMEM44Q2T9K0 475 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 ARHGAP11BQ3KRB8 267 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 CYP27C1Q4G0S4 372 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 BROXQ5VW32 411 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 ANKRD26P1Q6NSI1 321 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 SERPINA11Q86U17 422 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 CLECL1Q8IZS7 167 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 C10orf111Q8N326 155 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 ELAC2Q9BQ52 826 aaKnown RBP7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 WDR41Q9HAD4 459 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 BCL2L10Q9HD36 194 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 TMEM181Q9P2C4 612 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 MYOTQ9UBF9 498 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 SUCOQ9UBS9 1254 aaKnown RBP7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 CHCHD2Q9Y6H1 151 aaPredicted RBP7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 GLOD5A6NK44 160 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 MAN1A2O60476 641 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 COQ9O75208 318 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 SH3BGRLO75368 114 aa7.66□□□□□ -1.18
CDC42SE2-208ENST00000505065 GLSO94925 669 aaPredicted RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms