RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 CNOT1A5YKK6 2376 aaKnown RBP13.33□□□□□ -0.28
TCOF1-207ENST00000504761 CD47Q08722 323 aa13.33□□□□□ -0.28
TCOF1-207ENST00000504761 KRR1Q13601 381 aaKnown RBP13.33□□□□□ -0.28
TCOF1-207ENST00000504761 NKAIN2Q5VXU1 208 aa13.33□□□□□ -0.28
TCOF1-207ENST00000504761 C16orf58Q96GQ5 468 aa13.33□□□□□ -0.28
TCOF1-207ENST00000504761 GALNT8Q9NY28 637 aa13.33□□□□□ -0.28
TCOF1-207ENST00000504761 TNFRSF10DQ9UBN6 386 aa13.33□□□□□ -0.28
TCOF1-207ENST00000504761 RIMS3Q9UJD0 308 aa13.33□□□□□ -0.28
TCOF1-207ENST00000504761 RGPD4Q7Z3J3 1758 aa13.33□□□□□ -0.28
TCOF1-207ENST00000504761 SLC35F4A4IF30 521 aa13.32□□□□□ -0.28
TCOF1-207ENST00000504761 TFECO14948 347 aaPredicted RBP13.32□□□□□ -0.28
TCOF1-207ENST00000504761 MOSPD3O75425 235 aa13.32□□□□□ -0.28
TCOF1-207ENST00000504761 PLCXD2Q0VAA5 305 aa13.32□□□□□ -0.28
TCOF1-207ENST00000504761 TCTE1Q5JU00 501 aa13.32□□□□□ -0.28
TCOF1-207ENST00000504761 DAZLQ92904 295 aaKnown RBP13.32□□□□□ -0.28
TCOF1-207ENST00000504761 MAP3K3Q99759 626 aa13.32□□□□□ -0.28
TCOF1-207ENST00000504761 ANKRA2Q9H9E1 313 aa13.32□□□□□ -0.28
TCOF1-207ENST00000504761 AGPAT4Q9NRZ5 378 aa13.32□□□□□ -0.28
TCOF1-207ENST00000504761 TPRP12270 2363 aaKnown RBP13.32□□□□□ -0.28
TCOF1-207ENST00000504761 GKN3PP0CG01 181 aa13.32□□□□□ -0.28
TCOF1-207ENST00000504761 POLR2IP36954 125 aaKnown RBP13.32□□□□□ -0.28
TCOF1-207ENST00000504761 BCL6P41182 706 aa13.32□□□□□ -0.28
TCOF1-207ENST00000504761 SLC6A12P48065 614 aa13.32□□□□□ -0.28
TCOF1-207ENST00000504761 VEZF1Q14119 521 aa13.32□□□□□ -0.28
TCOF1-207ENST00000504761 TSTQ16762 297 aaKnown RBP13.32□□□□□ -0.28
TCOF1-207ENST00000504761 ARL9Q6T311 187 aa13.32□□□□□ -0.28
TCOF1-207ENST00000504761 NANOGNBQ7Z5D8 188 aa13.32□□□□□ -0.28
TCOF1-207ENST00000504761 VWA5B2Q8N398 1253 aa13.32□□□□□ -0.28
TCOF1-207ENST00000504761 IQCF1Q8N6M8 205 aa13.32□□□□□ -0.28
TCOF1-207ENST00000504761 ZNF548Q8NEK5 533 aaPredicted RBP13.32□□□□□ -0.28
TCOF1-207ENST00000504761 CPPED1Q9BRF8 314 aaPredicted RBP13.32□□□□□ -0.28
TCOF1-207ENST00000504761 ERVK-19Q9WJR5 959 aa13.32□□□□□ -0.28
TCOF1-207ENST00000504761 ATG4BQ9Y4P1 393 aa13.32□□□□□ -0.28
TCOF1-207ENST00000504761 CENPXA8MT69 81 aa13.32□□□□□ -0.28
TCOF1-207ENST00000504761 C11orf98E9PRG8 122 aa13.32□□□□□ -0.28
TCOF1-207ENST00000504761 H0YAE9 185 aa13.32□□□□□ -0.28
TCOF1-207ENST00000504761 PLPP1O14494 284 aa13.32□□□□□ -0.28
TCOF1-207ENST00000504761 CHST10O43529 356 aa13.32□□□□□ -0.28
TCOF1-207ENST00000504761 RPP14O95059 124 aaKnown RBP13.32□□□□□ -0.28
TCOF1-207ENST00000504761 RPLP0P05388 317 aaKnown RBP13.32□□□□□ -0.28
TCOF1-207ENST00000504761 INAVAQ3KP66 663 aa13.32□□□□□ -0.28
TCOF1-207ENST00000504761 MZT2AQ6P582 158 aa13.32□□□□□ -0.28
TCOF1-207ENST00000504761 ZNF773Q6PK81 442 aa13.32□□□□□ -0.28
TCOF1-207ENST00000504761 SPATC1Q76KD6 591 aa13.32□□□□□ -0.28
TCOF1-207ENST00000504761 OR4K17Q8NGC6 315 aa13.32□□□□□ -0.28
TCOF1-207ENST00000504761 OR51G2Q8NGK0 314 aa13.32□□□□□ -0.28
TCOF1-207ENST00000504761 MOSPD2Q8NHP6 518 aa13.32□□□□□ -0.28
TCOF1-207ENST00000504761 CREB3L4Q8TEY5 395 aa13.32□□□□□ -0.28
TCOF1-207ENST00000504761 MAGIXQ9H6Y5 334 aa13.32□□□□□ -0.28
TCOF1-207ENST00000504761 MALT1Q9UDY8 824 aa13.32□□□□□ -0.28
TCOF1-207ENST00000504761 PPT2Q9UMR5 302 aa13.32□□□□□ -0.28
TCOF1-207ENST00000504761 PLCL2Q9UPR0 1127 aa13.32□□□□□ -0.28
TCOF1-207ENST00000504761 PLD2O14939 933 aa13.31□□□□□ -0.28
TCOF1-207ENST00000504761 ABCB7O75027 752 aa13.31□□□□□ -0.28
TCOF1-207ENST00000504761 MRPL3P09001 348 aaKnown RBP13.31□□□□□ -0.28
TCOF1-207ENST00000504761 FURINP09958 794 aa13.31□□□□□ -0.28
TCOF1-207ENST00000504761 LTB4RQ15722 352 aa13.31□□□□□ -0.28
TCOF1-207ENST00000504761 COX20Q5RI15 118 aa13.31□□□□□ -0.28
TCOF1-207ENST00000504761 XKR5Q6UX68 686 aa13.31□□□□□ -0.28
TCOF1-207ENST00000504761 FAM131AQ6UXB0 335 aa13.31□□□□□ -0.28
TCOF1-207ENST00000504761 DIRAS2Q96HU8 199 aa13.31□□□□□ -0.28
TCOF1-207ENST00000504761 METTL2AQ96IZ6 378 aaKnown RBP13.31□□□□□ -0.28
TCOF1-207ENST00000504761 ZNF300Q96RE9 604 aaPredicted RBP13.31□□□□□ -0.28
TCOF1-207ENST00000504761 SPATA9Q9BWV2 254 aa13.31□□□□□ -0.28
TCOF1-207ENST00000504761 C1QTNF2Q9BXJ5 285 aa13.31□□□□□ -0.28
TCOF1-207ENST00000504761 YTHDF1Q9BYJ9 559 aaKnown RBP13.31□□□□□ -0.28
TCOF1-207ENST00000504761 TMEM45AQ9NWC5 275 aa13.31□□□□□ -0.28
TCOF1-207ENST00000504761 PTTG2Q9NZH5 202 aa13.31□□□□□ -0.28
TCOF1-207ENST00000504761 MBD1Q9UIS9 605 aaPredicted RBP13.31□□□□□ -0.28
TCOF1-207ENST00000504761 CROCCQ5TZA2 2017 aa13.31□□□□□ -0.28
TCOF1-207ENST00000504761 MYOFQ9NZM1 2061 aa13.31□□□□□ -0.28
TCOF1-207ENST00000504761 CDC40O60508 579 aaKnown RBP eCLIP13.31□□□□□ -0.289e-7■■■□□ 18.5
TCOF1-207ENST00000504761 CRYZQ08257 329 aaKnown RBP13.31□□□□□ -0.28
TCOF1-207ENST00000504761 ADAM15Q13444 863 aa13.31□□□□□ -0.28
TCOF1-207ENST00000504761 GFOD2Q3B7J2 385 aa13.31□□□□□ -0.28
TCOF1-207ENST00000504761 SLC27A4Q6P1M0 643 aa13.31□□□□□ -0.28
TCOF1-207ENST00000504761 TMEM151BQ8IW70 566 aa13.31□□□□□ -0.28
TCOF1-207ENST00000504761 PROKR2Q8NFJ6 384 aa13.31□□□□□ -0.28
TCOF1-207ENST00000504761 CDS1Q92903 461 aa13.31□□□□□ -0.28
TCOF1-207ENST00000504761 C12orf43Q96C57 262 aaKnown RBP13.31□□□□□ -0.28
TCOF1-207ENST00000504761 COQ7Q99807 217 aa13.31□□□□□ -0.28
TCOF1-207ENST00000504761 DEFB126Q9BYW3 111 aa13.31□□□□□ -0.28
TCOF1-207ENST00000504761 CDC14CA4D256 554 aa13.31□□□□□ -0.28
TCOF1-207ENST00000504761 GRXCR2A6NFK2 248 aa13.31□□□□□ -0.28
TCOF1-207ENST00000504761 ACOT8O14734 319 aa13.31□□□□□ -0.28
TCOF1-207ENST00000504761 VILLO15195 856 aa13.31□□□□□ -0.28
TCOF1-207ENST00000504761 INMTO95050 263 aa13.31□□□□□ -0.28
TCOF1-207ENST00000504761 ZNF3P17036 446 aa13.31□□□□□ -0.28
TCOF1-207ENST00000504761 PCGF2P35227 344 aa13.31□□□□□ -0.28
TCOF1-207ENST00000504761 AHRP35869 848 aa13.31□□□□□ -0.28
TCOF1-207ENST00000504761 GCGRP47871 477 aa13.31□□□□□ -0.28
TCOF1-207ENST00000504761 CRISP1P54107 249 aa13.31□□□□□ -0.28
TCOF1-207ENST00000504761 ZSWIM7Q19AV6 140 aa13.31□□□□□ -0.28
TCOF1-207ENST00000504761 FAM111BQ6SJ93 734 aa13.31□□□□□ -0.28
TCOF1-207ENST00000504761 OR8J2Q8NGG1 315 aa13.31□□□□□ -0.28
TCOF1-207ENST00000504761 PIK3R3Q92569 461 aa13.31□□□□□ -0.28
TCOF1-207ENST00000504761 ATOH1Q92858 354 aaPredicted RBP13.31□□□□□ -0.28
TCOF1-207ENST00000504761 S100A13Q99584 98 aa13.31□□□□□ -0.28
TCOF1-207ENST00000504761 CXorf36Q9H7Y0 433 aa13.31□□□□□ -0.28
TCOF1-207ENST00000504761 CNIH4Q9P003 139 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms