RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 ANKRD27Q96NW4 1050 aa3.11□□□□□ -1.91
CALD1-224ENST00000498254 VPS35Q96QK1 796 aa3.11□□□□□ -1.91
CALD1-224ENST00000498254 ZNF300Q96RE9 604 aaPredicted RBP3.11□□□□□ -1.91
CALD1-224ENST00000498254 F2RL3Q96RI0 385 aa3.11□□□□□ -1.91
CALD1-224ENST00000498254 RPAP3Q9H6T3 665 aaPredicted RBP3.11□□□□□ -1.91
CALD1-224ENST00000498254 RMND5AQ9H871 391 aa3.11□□□□□ -1.91
CALD1-224ENST00000498254 MTHFD2LQ9H903 347 aaPredicted RBP3.11□□□□□ -1.91
CALD1-224ENST00000498254 WDR41Q9HAD4 459 aa3.11□□□□□ -1.91
CALD1-224ENST00000498254 NMUR1Q9HB89 426 aa3.11□□□□□ -1.91
CALD1-224ENST00000498254 NRN1Q9NPD7 142 aa3.11□□□□□ -1.91
CALD1-224ENST00000498254 C1orf123Q9NWV4 160 aa3.11□□□□□ -1.91
CALD1-224ENST00000498254 HOXC10Q9NYD6 342 aa3.11□□□□□ -1.91
CALD1-224ENST00000498254 ZNF346Q9UL40 294 aaKnown RBP3.11□□□□□ -1.91
CALD1-224ENST00000498254 SLC9A8Q9Y2E8 581 aa3.11□□□□□ -1.91
CALD1-224ENST00000498254 RRP15Q9Y3B9 282 aaKnown RBP3.11□□□□□ -1.91
CALD1-224ENST00000498254 MRPS18CQ9Y3D5 142 aaKnown RBP3.11□□□□□ -1.91
CALD1-224ENST00000498254 RNF115Q9Y4L5 304 aa3.11□□□□□ -1.91
CALD1-224ENST00000498254 WIPI2Q9Y4P8 454 aa3.11□□□□□ -1.91
CALD1-224ENST00000498254 AFF2P51816 1311 aa3.11□□□□□ -1.91
CALD1-224ENST00000498254 FGD5Q6ZNL6 1462 aa3.1□□□□□ -1.91
CALD1-224ENST00000498254 ATAD2BQ9ULI0 1458 aa3.1□□□□□ -1.91
CALD1-224ENST00000498254 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.1□□□□□ -1.91
CALD1-224ENST00000498254 MEIOCA2RUB1 952 aa3.1□□□□□ -1.91
CALD1-224ENST00000498254 RNF222A6NCQ9 220 aa3.1□□□□□ -1.91
CALD1-224ENST00000498254 ZNF724A8MTY0 619 aa3.1□□□□□ -1.91
CALD1-224ENST00000498254 K7EQD1 137 aa3.1□□□□□ -1.91
CALD1-224ENST00000498254 MCF2LO15068 1137 aa3.1□□□□□ -1.91
CALD1-224ENST00000498254 ANGPT2O15123 496 aa3.1□□□□□ -1.91
CALD1-224ENST00000498254 RANBP6O60518 1105 aaKnown RBP3.1□□□□□ -1.91
CALD1-224ENST00000498254 TSPAN2O60636 221 aa3.1□□□□□ -1.91
CALD1-224ENST00000498254 IDH1O75874 414 aaKnown RBP3.1□□□□□ -1.91
CALD1-224ENST00000498254 STK17BO94768 372 aa3.1□□□□□ -1.91
CALD1-224ENST00000498254 AMBPP02760 352 aa3.1□□□□□ -1.91
CALD1-224ENST00000498254 CCDC159P0C7I6 412 aa3.1□□□□□ -1.91
CALD1-224ENST00000498254 OR9G9P0C7N8 305 aa3.1□□□□□ -1.91
CALD1-224ENST00000498254 ZNF853P0CG23 659 aa3.1□□□□□ -1.91
CALD1-224ENST00000498254 RPA2P15927 270 aa3.1□□□□□ -1.91
CALD1-224ENST00000498254 MAT2AP31153 395 aaKnown RBP3.1□□□□□ -1.91
CALD1-224ENST00000498254 CYLC1P35663 651 aaPredicted RBP3.1□□□□□ -1.91
CALD1-224ENST00000498254 ZFP36L2P47974 494 aaKnown RBP3.1□□□□□ -1.91
CALD1-224ENST00000498254 NDST2P52849 883 aa3.1□□□□□ -1.91
CALD1-224ENST00000498254 GBX2P52951 348 aaPredicted RBP3.1□□□□□ -1.91
CALD1-224ENST00000498254 NAPAP54920 295 aa3.1□□□□□ -1.91
CALD1-224ENST00000498254 RIGQ13278 110 aa3.1□□□□□ -1.91
CALD1-224ENST00000498254 ZNF177Q13360 481 aaPredicted RBP3.1□□□□□ -1.91
CALD1-224ENST00000498254 ENPP2Q13822 863 aa3.1□□□□□ -1.91
CALD1-224ENST00000498254 KIAA0141Q14154 515 aaPredicted RBP3.1□□□□□ -1.91
CALD1-224ENST00000498254 TPD52L1Q16890 204 aaPredicted RBP3.1□□□□□ -1.91
CALD1-224ENST00000498254 PARP6Q2NL67 630 aa3.1□□□□□ -1.91
CALD1-224ENST00000498254 SLC36A3Q495N2 470 aa3.1□□□□□ -1.91
CALD1-224ENST00000498254 BEND6Q5SZJ8 279 aaPredicted RBP3.1□□□□□ -1.91
CALD1-224ENST00000498254 ATAD3BQ5T9A4 648 aa3.1□□□□□ -1.91
CALD1-224ENST00000498254 WLSQ5T9L3 541 aa3.1□□□□□ -1.91
CALD1-224ENST00000498254 BSPRYQ5W0U4 402 aa3.1□□□□□ -1.91
CALD1-224ENST00000498254 SLC39A4Q6P5W5 647 aa3.1□□□□□ -1.91
CALD1-224ENST00000498254 BLOC1S2Q6QNY1 142 aa3.1□□□□□ -1.91
CALD1-224ENST00000498254 LCLAT1Q6UWP7 414 aa3.1□□□□□ -1.91
CALD1-224ENST00000498254 KIF6Q6ZMV9 814 aa3.1□□□□□ -1.91
CALD1-224ENST00000498254 ZNF841Q6ZN19 808 aa3.1□□□□□ -1.91
CALD1-224ENST00000498254 Q7L0L9 218 aa3.1□□□□□ -1.91
CALD1-224ENST00000498254 LHFPL4Q7Z7J7 247 aa3.1□□□□□ -1.91
CALD1-224ENST00000498254 LUZP1Q86V48 1076 aa3.1□□□□□ -1.91
CALD1-224ENST00000498254 ZDHHC21Q8IVQ6 265 aa3.1□□□□□ -1.91
CALD1-224ENST00000498254 KLHDC8BQ8IXV7 354 aa3.1□□□□□ -1.91
CALD1-224ENST00000498254 EFCAB13Q8IY85 973 aa3.1□□□□□ -1.91
CALD1-224ENST00000498254 GVQW1Q8N7I0 195 aa3.1□□□□□ -1.91
CALD1-224ENST00000498254 AQP11Q8NBQ7 271 aa3.1□□□□□ -1.91
CALD1-224ENST00000498254 VSTM2LQ96N03 204 aa3.1□□□□□ -1.91
CALD1-224ENST00000498254 PGLYRP2Q96PD5 576 aa3.1□□□□□ -1.91
CALD1-224ENST00000498254 ALKBH3Q96Q83 286 aaPredicted RBP3.1□□□□□ -1.91
CALD1-224ENST00000498254 USP28Q96RU2 1077 aa3.1□□□□□ -1.91
CALD1-224ENST00000498254 SYT15Q9BQS2 421 aa3.1□□□□□ -1.91
CALD1-224ENST00000498254 LZTS2Q9BRK4 669 aa3.1□□□□□ -1.91
CALD1-224ENST00000498254 TBCDQ9BTW9 1192 aa3.1□□□□□ -1.91
CALD1-224ENST00000498254 ALG9Q9H6U8 611 aa3.1□□□□□ -1.91
CALD1-224ENST00000498254 ADGRL4Q9HBW9 690 aa3.1□□□□□ -1.91
CALD1-224ENST00000498254 XPO7Q9UIA9 1087 aaKnown RBP3.1□□□□□ -1.91
CALD1-224ENST00000498254 ERRFI1Q9UJM3 462 aaPredicted RBP3.1□□□□□ -1.91
CALD1-224ENST00000498254 N6AMT1Q9Y5N5 214 aa3.1□□□□□ -1.91
CALD1-224ENST00000498254 KIF16BQ96L93 1317 aa3.1□□□□□ -1.91
CALD1-224ENST00000498254 IGHV3-20A0A0C4DH32 117 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 TTC26A0AVF1 554 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 A8MUI8 341 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 K7EQM0 130 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 FBP2O00757 339 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 BUB1O43683 1085 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 SDC3O75056 442 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 CEACAM4O75871 244 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 OAS1P00973 400 aaKnown RBP3.09□□□□□ -1.91
CALD1-224ENST00000498254 CSF2P04141 144 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 MYOGP15173 224 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 ZNF10P21506 573 aaPredicted RBP3.09□□□□□ -1.91
CALD1-224ENST00000498254 EDNRAP25101 427 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 DPP4P27487 766 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 HOXD10P28358 340 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 FCGR2CP31995 323 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 RPL9P32969 192 aaKnown RBP3.09□□□□□ -1.91
CALD1-224ENST00000498254 METAP1P53582 386 aa3.09□□□□□ -1.91
CALD1-224ENST00000498254 SH3BGRP55822 239 aaPredicted RBP3.09□□□□□ -1.91
CALD1-224ENST00000498254 PPIAP62937 165 aaKnown RBP3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms