RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 SERPINH1P50454 418 aaKnown RBP2.38□□□□□ -2.03
SMC4-227ENST00000497984 TKTL1P51854 596 aa2.38□□□□□ -2.03
SMC4-227ENST00000497984 GEMP55040 296 aa2.38□□□□□ -2.03
SMC4-227ENST00000497984 RIPPLY3P57055 190 aa2.38□□□□□ -2.03
SMC4-227ENST00000497984 OVGP1Q12889 678 aa2.38□□□□□ -2.03
SMC4-227ENST00000497984 KLF5Q13887 457 aaPredicted RBP2.38□□□□□ -2.03
SMC4-227ENST00000497984 PAN3Q58A45 887 aaKnown RBP2.38□□□□□ -2.03
SMC4-227ENST00000497984 RTL6Q6ICC9 239 aa2.38□□□□□ -2.03
SMC4-227ENST00000497984 STEAP1BQ6NZ63 245 aa2.38□□□□□ -2.03
SMC4-227ENST00000497984 ASRGL1Q7L266 308 aa2.38□□□□□ -2.03
SMC4-227ENST00000497984 PRSS42Q7Z5A4 293 aa2.38□□□□□ -2.03
SMC4-227ENST00000497984 KRT77Q7Z794 578 aa2.38□□□□□ -2.03
SMC4-227ENST00000497984 APOBEC3FQ8IUX4 373 aaKnown RBP2.38□□□□□ -2.03
SMC4-227ENST00000497984 NAT8LQ8N9F0 302 aa2.38□□□□□ -2.03
SMC4-227ENST00000497984 OR13F1Q8NGS4 319 aa2.38□□□□□ -2.03
SMC4-227ENST00000497984 ZNF671Q8TAW3 534 aa2.38□□□□□ -2.03
SMC4-227ENST00000497984 GDAP1Q8TB36 358 aa2.38□□□□□ -2.03
SMC4-227ENST00000497984 RPGRIP1Q96KN7 1286 aa2.38□□□□□ -2.03
SMC4-227ENST00000497984 OR5M11Q96RB7 305 aa2.38□□□□□ -2.03
SMC4-227ENST00000497984 GPR174Q9BXC1 333 aa2.38□□□□□ -2.03
SMC4-227ENST00000497984 AKIRIN1Q9H9L7 192 aaPredicted RBP2.38□□□□□ -2.03
SMC4-227ENST00000497984 GRPEL1Q9HAV7 217 aa2.38□□□□□ -2.03
SMC4-227ENST00000497984 IL1RAPL2Q9NP60 686 aa2.38□□□□□ -2.03
SMC4-227ENST00000497984 DDX28Q9NUL7 540 aaKnown RBP2.38□□□□□ -2.03
SMC4-227ENST00000497984 VPS54Q9P1Q0 977 aa2.38□□□□□ -2.03
SMC4-227ENST00000497984 MAD2L2Q9UI95 211 aa2.38□□□□□ -2.03
SMC4-227ENST00000497984 MRPS2Q9Y399 296 aaKnown RBP2.38□□□□□ -2.03
SMC4-227ENST00000497984 A0A0U1RQK1 487 aa2.37□□□□□ -2.03
SMC4-227ENST00000497984 ZNF320A2RRD8 509 aa2.37□□□□□ -2.03
SMC4-227ENST00000497984 A8MX80 341 aa2.37□□□□□ -2.03
SMC4-227ENST00000497984 CYB561D2O14569 222 aa2.37□□□□□ -2.03
SMC4-227ENST00000497984 SBK2P0C263 348 aa2.37□□□□□ -2.03
SMC4-227ENST00000497984 CT45A10P0DMU9 189 aa2.37□□□□□ -2.03
SMC4-227ENST00000497984 UROSP10746 265 aa2.37□□□□□ -2.03
SMC4-227ENST00000497984 CD1EP15812 388 aa2.37□□□□□ -2.03
SMC4-227ENST00000497984 MDKP21741 143 aaPredicted RBP2.37□□□□□ -2.03
SMC4-227ENST00000497984 TRADDQ15628 312 aa2.37□□□□□ -2.03
SMC4-227ENST00000497984 CD226Q15762 336 aa2.37□□□□□ -2.03
SMC4-227ENST00000497984 QRICH1Q2TAL8 776 aa2.37□□□□□ -2.03
SMC4-227ENST00000497984 MS4A13Q5J8X5 152 aa2.37□□□□□ -2.03
SMC4-227ENST00000497984 CELF3Q5SZQ8 465 aaKnown RBP2.37□□□□□ -2.03
SMC4-227ENST00000497984 CDC42EP5Q6NZY7 148 aa2.37□□□□□ -2.03
SMC4-227ENST00000497984 KCTD9Q7L273 389 aa2.37□□□□□ -2.03
SMC4-227ENST00000497984 STHQ8IWL8 128 aa2.37□□□□□ -2.03
SMC4-227ENST00000497984 FBXW8Q8N3Y1 598 aa2.37□□□□□ -2.03
SMC4-227ENST00000497984 Q8N9G6 341 aaPredicted RBP2.37□□□□□ -2.03
SMC4-227ENST00000497984 NFAM1Q8NET5 270 aaPredicted RBP2.37□□□□□ -2.03
SMC4-227ENST00000497984 FRAT1Q92837 279 aaPredicted RBP2.37□□□□□ -2.03
SMC4-227ENST00000497984 BCL2L2Q92843 193 aaPredicted RBP2.37□□□□□ -2.03
SMC4-227ENST00000497984 COG3Q96JB2 828 aa2.37□□□□□ -2.03
SMC4-227ENST00000497984 MAGEB18Q96M61 343 aa2.37□□□□□ -2.03
SMC4-227ENST00000497984 CPXM1Q96SM3 734 aa2.37□□□□□ -2.03
SMC4-227ENST00000497984 KIR2DL4Q99706 377 aa2.37□□□□□ -2.03
SMC4-227ENST00000497984 CACNG6Q9BXT2 260 aa2.37□□□□□ -2.03
SMC4-227ENST00000497984 IKZF5Q9H5V7 419 aa2.37□□□□□ -2.03
SMC4-227ENST00000497984 CENPMQ9NSP4 180 aa2.37□□□□□ -2.03
SMC4-227ENST00000497984 DPM3Q9P2X0 92 aa2.37□□□□□ -2.03
SMC4-227ENST00000497984 CCPG1Q9ULG6 757 aa2.37□□□□□ -2.03
SMC4-227ENST00000497984 ABCG2Q9UNQ0 655 aa2.37□□□□□ -2.03
SMC4-227ENST00000497984 RNF115Q9Y4L5 304 aa2.37□□□□□ -2.03
SMC4-227ENST00000497984 ZFP37Q9Y6Q3 630 aaPredicted RBP2.37□□□□□ -2.03
SMC4-227ENST00000497984 CFAP65Q6ZU64 1925 aaKnown RBP2.36□□□□□ -2.03
SMC4-227ENST00000497984 A0A0A6YYC8 382 aaPredicted RBP2.36□□□□□ -2.03
SMC4-227ENST00000497984 FRG2CA6NGY1 282 aa2.36□□□□□ -2.03
SMC4-227ENST00000497984 I3L1I5 382 aaPredicted RBP2.36□□□□□ -2.03
SMC4-227ENST00000497984 TYROBPO43914 113 aa2.36□□□□□ -2.03
SMC4-227ENST00000497984 H2AFZP0C0S5 128 aa2.36□□□□□ -2.03
SMC4-227ENST00000497984 B4GALT1P15291 398 aa2.36□□□□□ -2.03
SMC4-227ENST00000497984 XCR1P46094 333 aa2.36□□□□□ -2.03
SMC4-227ENST00000497984 ARHGDIBP52566 201 aa2.36□□□□□ -2.03
SMC4-227ENST00000497984 VCPP55072 806 aaKnown RBP2.36□□□□□ -2.03
SMC4-227ENST00000497984 CD47Q08722 323 aa2.36□□□□□ -2.03
SMC4-227ENST00000497984 GK2Q14410 553 aaPredicted RBP2.36□□□□□ -2.03
SMC4-227ENST00000497984 SLC10A1Q14973 349 aa2.36□□□□□ -2.03
SMC4-227ENST00000497984 EXOSC7Q15024 291 aaKnown RBP2.36□□□□□ -2.03
SMC4-227ENST00000497984 HKDC1Q2TB90 917 aa2.36□□□□□ -2.03
SMC4-227ENST00000497984 AARDQ4LEZ3 155 aa2.36□□□□□ -2.03
SMC4-227ENST00000497984 GLRA4Q5JXX5 417 aa2.36□□□□□ -2.03
SMC4-227ENST00000497984 SEL1L2Q5TEA6 688 aa2.36□□□□□ -2.03
SMC4-227ENST00000497984 PRAMEF8Q5VWM4 474 aa2.36□□□□□ -2.03
SMC4-227ENST00000497984 SLC22A10Q63ZE4 541 aa2.36□□□□□ -2.03
SMC4-227ENST00000497984 TIFABQ6ZNK6 161 aa2.36□□□□□ -2.03
SMC4-227ENST00000497984 LUZP1Q86V48 1076 aa2.36□□□□□ -2.03
SMC4-227ENST00000497984 ERICH1Q86X53 443 aa2.36□□□□□ -2.03
SMC4-227ENST00000497984 FAM46BQ96A09 425 aa2.36□□□□□ -2.03
SMC4-227ENST00000497984 CXorf58Q96LI9 332 aa2.36□□□□□ -2.03
SMC4-227ENST00000497984 CASD1Q96PB1 797 aa2.36□□□□□ -2.03
SMC4-227ENST00000497984 FUNDC2Q9BWH2 189 aa2.36□□□□□ -2.03
SMC4-227ENST00000497984 FUT8Q9BYC5 575 aa2.36□□□□□ -2.03
SMC4-227ENST00000497984 DCLRE1BQ9H816 532 aa2.36□□□□□ -2.03
SMC4-227ENST00000497984 TMEM9Q9P0T7 183 aa2.36□□□□□ -2.03
SMC4-227ENST00000497984 TRPC4Q9UBN4 977 aa2.36□□□□□ -2.03
SMC4-227ENST00000497984 KLHL21Q9UJP4 597 aa2.36□□□□□ -2.03
SMC4-227ENST00000497984 SLC9A8Q9Y2E8 581 aa2.36□□□□□ -2.03
SMC4-227ENST00000497984 SYNJ2O15056 1496 aa2.35□□□□□ -2.03
SMC4-227ENST00000497984 SLC28A1O00337 649 aa2.35□□□□□ -2.03
SMC4-227ENST00000497984 SLC17A2O00624 439 aa2.35□□□□□ -2.03
SMC4-227ENST00000497984 SH2D1BO14796 132 aa2.35□□□□□ -2.03
SMC4-227ENST00000497984 ZNF263O14978 683 aa2.35□□□□□ -2.03
SMC4-227ENST00000497984 NUDT21O43809 227 aaKnown RBP2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms