RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 CTHRC1Q96CG8 243 aa18.64■□□□□ 0.57
CTSD-206ENST00000497544 FBXL20Q96IG2 436 aa18.64■□□□□ 0.57
CTSD-206ENST00000497544 NUDT9Q9BW91 350 aa18.64■□□□□ 0.57
CTSD-206ENST00000497544 MMP25Q9NPA2 562 aa18.64■□□□□ 0.57
CTSD-206ENST00000497544 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.64■□□□□ 0.572e-8■■□□□ 11.5
CTSD-206ENST00000497544 BCAP29Q9UHQ4 241 aa18.64■□□□□ 0.57
CTSD-206ENST00000497544 CACNA1DQ01668 2161 aa18.64■□□□□ 0.57
CTSD-206ENST00000497544 CPSF4O95639 269 aaKnown RBP18.63■□□□□ 0.57
CTSD-206ENST00000497544 ABCB1P08183 1280 aaPredicted RBP18.63■□□□□ 0.57
CTSD-206ENST00000497544 ADSLP30566 484 aaPredicted RBP18.63■□□□□ 0.57
CTSD-206ENST00000497544 SSTR4P31391 388 aa18.63■□□□□ 0.57
CTSD-206ENST00000497544 GPR143P51810 404 aa18.63■□□□□ 0.57
CTSD-206ENST00000497544 MRPS35P82673 323 aaKnown RBP18.63■□□□□ 0.57
CTSD-206ENST00000497544 LRRC74AQ0VAA2 488 aa18.63■□□□□ 0.57
CTSD-206ENST00000497544 Q0VFX4 171 aa18.63■□□□□ 0.57
CTSD-206ENST00000497544 MGAT2Q10469 447 aa18.63■□□□□ 0.57
CTSD-206ENST00000497544 FUT7Q11130 342 aa18.63■□□□□ 0.57
CTSD-206ENST00000497544 TRMT12Q53H54 448 aaKnown RBP18.63■□□□□ 0.57
CTSD-206ENST00000497544 ZNF628Q5EBL2 1059 aa18.63■□□□□ 0.57
CTSD-206ENST00000497544 BORAQ6PGQ7 559 aa18.63■□□□□ 0.57
CTSD-206ENST00000497544 BLOC1S3Q6QNY0 202 aa18.63■□□□□ 0.57
CTSD-206ENST00000497544 RNF111Q6ZNA4 994 aa18.63■□□□□ 0.57
CTSD-206ENST00000497544 MTDHQ86UE4 582 aaKnown RBP18.63■□□□□ 0.57
CTSD-206ENST00000497544 ANKRD46Q86W74 232 aa18.63■□□□□ 0.57
CTSD-206ENST00000497544 FUNDC1Q8IVP5 155 aa18.63■□□□□ 0.57
CTSD-206ENST00000497544 AMER2Q8N7J2 671 aa18.63■□□□□ 0.57
CTSD-206ENST00000497544 APCDD1LQ8NCL9 501 aa18.63■□□□□ 0.57
CTSD-206ENST00000497544 OR7G1Q8NGA0 311 aa18.63■□□□□ 0.57
CTSD-206ENST00000497544 ELP4Q96EB1 424 aa18.63■□□□□ 0.57
CTSD-206ENST00000497544 MAGED4Q96JG8 741 aa18.63■□□□□ 0.57
CTSD-206ENST00000497544 DEFB126Q9BYW3 111 aa18.63■□□□□ 0.57
CTSD-206ENST00000497544 OR10A5Q9H207 317 aa18.63■□□□□ 0.57
CTSD-206ENST00000497544 RMND5AQ9H871 391 aa18.63■□□□□ 0.57
CTSD-206ENST00000497544 C3orf14Q9HBI5 128 aa18.63■□□□□ 0.57
CTSD-206ENST00000497544 NBASA2RRP1 2371 aa18.62■□□□□ 0.57
CTSD-206ENST00000497544 TRBV11-1A0A0K0K1C0 115 aa18.62■□□□□ 0.57
CTSD-206ENST00000497544 CCDC154A6NI56 674 aa18.62■□□□□ 0.57
CTSD-206ENST00000497544 A6NL46 340 aa18.62■□□□□ 0.57
CTSD-206ENST00000497544 HRKO00198 91 aa18.62■□□□□ 0.57
CTSD-206ENST00000497544 PLOD2O00469 737 aa18.62■□□□□ 0.57
CTSD-206ENST00000497544 NR5A2O00482 541 aa18.62■□□□□ 0.57
CTSD-206ENST00000497544 FCHO1O14526 889 aa18.62■□□□□ 0.57
CTSD-206ENST00000497544 CELA2AP08217 269 aa18.62■□□□□ 0.57
CTSD-206ENST00000497544 ITGAMP11215 1152 aa18.62■□□□□ 0.57
CTSD-206ENST00000497544 ZFP36L2P47974 494 aaKnown RBP18.62■□□□□ 0.57
CTSD-206ENST00000497544 KLF10Q13118 480 aa18.62■□□□□ 0.57
CTSD-206ENST00000497544 JMJD6Q6NYC1 403 aaPredicted RBP18.62■□□□□ 0.57
CTSD-206ENST00000497544 TMEM107Q6UX40 140 aa18.62■□□□□ 0.57
CTSD-206ENST00000497544 HSDL2Q6YN16 418 aa18.62■□□□□ 0.57
CTSD-206ENST00000497544 CLECL1Q8IZS7 167 aa18.62■□□□□ 0.57
CTSD-206ENST00000497544 GALNT16Q8N428 558 aa18.62■□□□□ 0.57
CTSD-206ENST00000497544 ZNF321PQ8N8H1 164 aa18.62■□□□□ 0.57
CTSD-206ENST00000497544 OR4A15Q8NGL6 344 aa18.62■□□□□ 0.57
CTSD-206ENST00000497544 BCAS4Q8TDM0 211 aa18.62■□□□□ 0.57
CTSD-206ENST00000497544 ELP5Q8TE02 316 aa18.62■□□□□ 0.57
CTSD-206ENST00000497544 ERP27Q96DN0 273 aa18.62■□□□□ 0.57
CTSD-206ENST00000497544 SPDL1Q96EA4 605 aa18.62■□□□□ 0.57
CTSD-206ENST00000497544 NMUR2Q9GZQ4 415 aa18.62■□□□□ 0.57
CTSD-206ENST00000497544 LHPPQ9H008 270 aa18.62■□□□□ 0.57
CTSD-206ENST00000497544 PTGFRNQ9P2B2 879 aa18.62■□□□□ 0.57
CTSD-206ENST00000497544 ZNF639Q9UID6 485 aa18.62■□□□□ 0.57
CTSD-206ENST00000497544 BTNL2Q9UIR0 455 aa18.62■□□□□ 0.57
CTSD-206ENST00000497544 SNX8Q9Y5X2 465 aa18.62■□□□□ 0.57
CTSD-206ENST00000497544 A0A087WV62 115 aa18.61■□□□□ 0.57
CTSD-206ENST00000497544 DYTNA2CJ06 578 aa18.61■□□□□ 0.57
CTSD-206ENST00000497544 A8MUI8 341 aa18.61■□□□□ 0.57
CTSD-206ENST00000497544 NDUFAB1O14561 156 aa18.61■□□□□ 0.57
CTSD-206ENST00000497544 PLOD3O60568 738 aa18.61■□□□□ 0.57
CTSD-206ENST00000497544 SCN2BO60939 215 aa18.61■□□□□ 0.57
CTSD-206ENST00000497544 ZFAND5O76080 213 aa18.61■□□□□ 0.57
CTSD-206ENST00000497544 IGKV3-11P04433 115 aa18.61■□□□□ 0.57
CTSD-206ENST00000497544 S1PR1P21453 382 aa18.61■□□□□ 0.57
CTSD-206ENST00000497544 MC3RP41968 323 aa18.61■□□□□ 0.57
CTSD-206ENST00000497544 CDK9P50750 372 aaKnown RBP18.61■□□□□ 0.57
CTSD-206ENST00000497544 SOX8P57073 446 aa18.61■□□□□ 0.57
CTSD-206ENST00000497544 EXOSC7Q15024 291 aaKnown RBP18.61■□□□□ 0.57
CTSD-206ENST00000497544 MAPKAPK3Q16644 382 aa18.61■□□□□ 0.57
CTSD-206ENST00000497544 TBR1Q16650 682 aa18.61■□□□□ 0.57
CTSD-206ENST00000497544 VPS26BQ4G0F5 336 aa18.61■□□□□ 0.57
CTSD-206ENST00000497544 TIGD2Q4W5G0 525 aa18.61■□□□□ 0.57
CTSD-206ENST00000497544 GK5Q6ZS86 529 aa18.61■□□□□ 0.57
CTSD-206ENST00000497544 MSANTD1Q6ZTZ1 278 aa18.61■□□□□ 0.57
CTSD-206ENST00000497544 SLC29A4Q7RTT9 530 aa18.61■□□□□ 0.57
CTSD-206ENST00000497544 KIF2BQ8N4N8 673 aa18.61■□□□□ 0.57
CTSD-206ENST00000497544 CCDC197Q8NCU1 140 aa18.61■□□□□ 0.57
CTSD-206ENST00000497544 OR7G2Q8NG99 324 aa18.61■□□□□ 0.57
CTSD-206ENST00000497544 OR52R1Q8NGF1 315 aa18.61■□□□□ 0.57
CTSD-206ENST00000497544 OR5L2Q8NGL0 311 aa18.61■□□□□ 0.57
CTSD-206ENST00000497544 VPS33AQ96AX1 596 aa18.61■□□□□ 0.57
CTSD-206ENST00000497544 NEUROD4Q9HD90 331 aa18.61■□□□□ 0.57
CTSD-206ENST00000497544 DDX18Q9NVP1 670 aaKnown RBP18.61■□□□□ 0.57
CTSD-206ENST00000497544 TAS2R9Q9NYW1 312 aa18.61■□□□□ 0.57
CTSD-206ENST00000497544 CFL2Q9Y281 166 aa18.61■□□□□ 0.57
CTSD-206ENST00000497544 CAPN7Q9Y6W3 813 aa18.61■□□□□ 0.57
CTSD-206ENST00000497544 OR6C76A6NM76 312 aa18.6■□□□□ 0.57
CTSD-206ENST00000497544 SLC22A2O15244 555 aa18.6■□□□□ 0.57
CTSD-206ENST00000497544 EMC8O43402 210 aa18.6■□□□□ 0.57
CTSD-206ENST00000497544 DNAJB5O75953 348 aa18.6■□□□□ 0.57
CTSD-206ENST00000497544 SNRPB2P08579 225 aaKnown RBP18.6■□□□□ 0.57
CTSD-206ENST00000497544 IFI6P09912 130 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms