RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, human

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1E-213	ENST00000495232	SLC15A4	Q8N697	577 aa		11.2	□□□□□ -0.62
CSNK1E-213	ENST00000495232	ZNF615	Q8N8J6	731 aa		11.2	□□□□□ -0.62
CSNK1E-213	ENST00000495232	TMEM178A	Q8NBL3	297 aa		11.2	□□□□□ -0.62
CSNK1E-213	ENST00000495232	VPS37A	Q8NEZ2	397 aa		11.2	□□□□□ -0.62
CSNK1E-213	ENST00000495232	OR7A2P	Q8NGA2	310 aa		11.2	□□□□□ -0.62
CSNK1E-213	ENST00000495232	C16orf52	Q8NHV5	167 aa		11.2	□□□□□ -0.62
CSNK1E-213	ENST00000495232	CTHRC1	Q96CG8	243 aa		11.2	□□□□□ -0.62
CSNK1E-213	ENST00000495232	MAGED4	Q96JG8	741 aa		11.2	□□□□□ -0.62
CSNK1E-213	ENST00000495232	MAEL	Q96JY0	434 aa	Known RBP	11.2	□□□□□ -0.62
CSNK1E-213	ENST00000495232	RASL10B	Q96S79	203 aa		11.2	□□□□□ -0.62
CSNK1E-213	ENST00000495232	ZBTB18	Q99592	522 aa		11.2	□□□□□ -0.62
CSNK1E-213	ENST00000495232	DUSP26	Q9BV47	211 aa		11.2	□□□□□ -0.62
CSNK1E-213	ENST00000495232	BHLHE41	Q9C0J9	482 aa	Predicted RBP	11.2	□□□□□ -0.62
CSNK1E-213	ENST00000495232	C3orf14	Q9HBI5	128 aa		11.2	□□□□□ -0.62
CSNK1E-213	ENST00000495232	ACSS1	Q9NUB1	689 aa	Predicted RBP	11.2	□□□□□ -0.62
CSNK1E-213	ENST00000495232	RYDEN	Q9NUL5	291 aa	Known RBP	11.2	□□□□□ -0.62
CSNK1E-213	ENST00000495232	DDX18	Q9NVP1	670 aa	Known RBP	11.2	□□□□□ -0.62
CSNK1E-213	ENST00000495232	LUZP4	Q9P127	313 aa		11.2	□□□□□ -0.62
CSNK1E-213	ENST00000495232	ZNF639	Q9UID6	485 aa		11.2	□□□□□ -0.62
CSNK1E-213	ENST00000495232		A0A087WV62	115 aa		11.19	□□□□□ -0.62
CSNK1E-213	ENST00000495232		A0A1W2PRB8	838 aa		11.19	□□□□□ -0.62
CSNK1E-213	ENST00000495232	TMEM200C	A6NKL6	621 aa		11.19	□□□□□ -0.62
CSNK1E-213	ENST00000495232	UBD	O15205	165 aa		11.19	□□□□□ -0.62
CSNK1E-213	ENST00000495232	CFLAR	O15519	480 aa		11.19	□□□□□ -0.62
CSNK1E-213	ENST00000495232	SLC28A2	O43868	658 aa		11.19	□□□□□ -0.62
CSNK1E-213	ENST00000495232	PLOD3	O60568	738 aa		11.19	□□□□□ -0.62
CSNK1E-213	ENST00000495232	CBX7	O95931	251 aa		11.19	□□□□□ -0.62
CSNK1E-213	ENST00000495232	CLPS	P04118	112 aa		11.19	□□□□□ -0.62
CSNK1E-213	ENST00000495232	VIM	P08670	466 aa	Known RBP	11.19	□□□□□ -0.62
CSNK1E-213	ENST00000495232	LAMP1	P11279	417 aa		11.19	□□□□□ -0.62
CSNK1E-213	ENST00000495232	S1PR1	P21453	382 aa		11.19	□□□□□ -0.62
CSNK1E-213	ENST00000495232	MC3R	P41968	323 aa		11.19	□□□□□ -0.62
CSNK1E-213	ENST00000495232	NR0B1	P51843	470 aa	Known RBP	11.19	□□□□□ -0.62
CSNK1E-213	ENST00000495232	NME5	P56597	212 aa		11.19	□□□□□ -0.62
CSNK1E-213	ENST00000495232	C21orf58	P58505	322 aa		11.19	□□□□□ -0.62
CSNK1E-213	ENST00000495232	STX1B	P61266	288 aa		11.19	□□□□□ -0.62
CSNK1E-213	ENST00000495232	DCAF7	P61962	342 aa		11.19	□□□□□ -0.62
CSNK1E-213	ENST00000495232	SRSF11	Q05519	484 aa	Known RBP	11.19	□□□□□ -0.62
CSNK1E-213	ENST00000495232	MAPKAPK3	Q16644	382 aa		11.19	□□□□□ -0.62
CSNK1E-213	ENST00000495232	GSTA3	Q16772	222 aa		11.19	□□□□□ -0.62
CSNK1E-213	ENST00000495232	DPY19L1	Q2PZI1	675 aa		11.19	□□□□□ -0.62
CSNK1E-213	ENST00000495232	LSM12	Q3MHD2	195 aa	Known RBP	11.19	□□□□□ -0.62
CSNK1E-213	ENST00000495232	PIGG	Q5H8A4	983 aa		11.19	□□□□□ -0.62
CSNK1E-213	ENST00000495232	ZNF766	Q5HY98	468 aa		11.19	□□□□□ -0.62
CSNK1E-213	ENST00000495232	SPINK14	Q6IE38	97 aa		11.19	□□□□□ -0.62
CSNK1E-213	ENST00000495232	IL20RB	Q6UXL0	311 aa		11.19	□□□□□ -0.62
CSNK1E-213	ENST00000495232	ZNF551	Q7Z340	670 aa	Predicted RBP	11.19	□□□□□ -0.62
CSNK1E-213	ENST00000495232	SZRD1	Q7Z422	152 aa		11.19	□□□□□ -0.62
CSNK1E-213	ENST00000495232	ZNF605	Q86T29	641 aa		11.19	□□□□□ -0.62
CSNK1E-213	ENST00000495232	RIMKLA	Q8IXN7	391 aa		11.19	□□□□□ -0.62
CSNK1E-213	ENST00000495232	FAM98A	Q8NCA5	519 aa	Known RBP	11.19	□□□□□ -0.62
CSNK1E-213	ENST00000495232	TP53INP1	Q96A56	240 aa		11.19	□□□□□ -0.62
CSNK1E-213	ENST00000495232	COQ8B	Q96D53	544 aa		11.19	□□□□□ -0.62
CSNK1E-213	ENST00000495232	ELP4	Q96EB1	424 aa		11.19	□□□□□ -0.62
CSNK1E-213	ENST00000495232	SIGLEC12	Q96PQ1	595 aa		11.19	□□□□□ -0.62
CSNK1E-213	ENST00000495232	SIKE1	Q9BRV8	207 aa		11.19	□□□□□ -0.62
CSNK1E-213	ENST00000495232	TCF7L2	Q9NQB0	619 aa		11.19	□□□□□ -0.62
CSNK1E-213	ENST00000495232	KLHL1	Q9NR64	748 aa		11.19	□□□□□ -0.62
CSNK1E-213	ENST00000495232	AIG1	Q9NVV5	245 aa		11.19	□□□□□ -0.62
CSNK1E-213	ENST00000495232	PCDHGB4	Q9UN71	923 aa		11.19	□□□□□ -0.62
CSNK1E-213	ENST00000495232	COL6A6	A6NMZ7	2263 aa		11.18	□□□□□ -0.62
CSNK1E-213	ENST00000495232	PRRC2C	Q9Y520	2896 aa	Known RBP	11.18	□□□□□ -0.62
CSNK1E-213	ENST00000495232	PLOD2	O00469	737 aa		11.18	□□□□□ -0.62
CSNK1E-213	ENST00000495232	ZNF195	O14628	629 aa		11.18	□□□□□ -0.62
CSNK1E-213	ENST00000495232	EDF1	O60869	148 aa	Known RBP	11.18	□□□□□ -0.62
CSNK1E-213	ENST00000495232	SLC25A12	O75746	678 aa		11.18	□□□□□ -0.62
CSNK1E-213	ENST00000495232	SP1	P08047	785 aa		11.18	□□□□□ -0.62
CSNK1E-213	ENST00000495232	ALDOC	P09972	364 aa	Known RBP	11.18	□□□□□ -0.62
CSNK1E-213	ENST00000495232	TROVE2	P10155	538 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
CSNK1E-213	ENST00000495232	GPX3	P22352	226 aa		11.18	□□□□□ -0.62
CSNK1E-213	ENST00000495232	MDH1	P40925	334 aa	Known RBP	11.18	□□□□□ -0.62
CSNK1E-213	ENST00000495232	SOX3	P41225	446 aa		11.18	□□□□□ -0.62
CSNK1E-213	ENST00000495232	FRK	P42685	505 aa	Predicted RBP	11.18	□□□□□ -0.62
CSNK1E-213	ENST00000495232	KIR3DL1	P43629	444 aa		11.18	□□□□□ -0.62
CSNK1E-213	ENST00000495232	TMED10	P49755	219 aa	Known RBP	11.18	□□□□□ -0.62
CSNK1E-213	ENST00000495232	IDH3A	P50213	366 aa		11.18	□□□□□ -0.62
CSNK1E-213	ENST00000495232	PRR5	P85299	388 aa		11.18	□□□□□ -0.62
CSNK1E-213	ENST00000495232	GUCY1A3	Q02108	690 aa		11.18	□□□□□ -0.62
CSNK1E-213	ENST00000495232	ZNF155	Q12901	538 aa	Predicted RBP	11.18	□□□□□ -0.62
CSNK1E-213	ENST00000495232	MLC1	Q15049	377 aa		11.18	□□□□□ -0.62
CSNK1E-213	ENST00000495232	ZNHIT3	Q15649	155 aa	Predicted RBP	11.18	□□□□□ -0.62
CSNK1E-213	ENST00000495232	ZNF468	Q5VIY5	522 aa	Predicted RBP	11.18	□□□□□ -0.62
CSNK1E-213	ENST00000495232	ANXA8L1	Q5VT79	327 aa		11.18	□□□□□ -0.62
CSNK1E-213	ENST00000495232	SLC25A25	Q6KCM7	469 aa		11.18	□□□□□ -0.62
CSNK1E-213	ENST00000495232	MAVS	Q7Z434	540 aa		11.18	□□□□□ -0.62
CSNK1E-213	ENST00000495232	DND1	Q8IYX4	353 aa	Known RBP	11.18	□□□□□ -0.62
CSNK1E-213	ENST00000495232	C17orf47	Q8NEP4	570 aa		11.18	□□□□□ -0.62
CSNK1E-213	ENST00000495232	OR7G2	Q8NG99	324 aa		11.18	□□□□□ -0.62
CSNK1E-213	ENST00000495232	OR5P2	Q8WZ92	322 aa		11.18	□□□□□ -0.62
CSNK1E-213	ENST00000495232	ADIPOR1	Q96A54	375 aa		11.18	□□□□□ -0.62
CSNK1E-213	ENST00000495232	LCOR	Q96JN0	433 aa	Predicted RBP	11.18	□□□□□ -0.62
CSNK1E-213	ENST00000495232	RILP	Q96NA2	401 aa		11.18	□□□□□ -0.62
CSNK1E-213	ENST00000495232	OR52B2	Q96RD2	323 aa		11.18	□□□□□ -0.62
CSNK1E-213	ENST00000495232	CCDC28B	Q9BUN5	200 aa		11.18	□□□□□ -0.62
CSNK1E-213	ENST00000495232	TRIM45	Q9H8W5	580 aa	Predicted RBP	11.18	□□□□□ -0.62
CSNK1E-213	ENST00000495232	ANKRA2	Q9H9E1	313 aa		11.18	□□□□□ -0.62
CSNK1E-213	ENST00000495232	NEUROD4	Q9HD90	331 aa		11.18	□□□□□ -0.62
CSNK1E-213	ENST00000495232	NPHS2	Q9NP85	383 aa		11.18	□□□□□ -0.62
CSNK1E-213	ENST00000495232	TIMMDC1	Q9NPL8	285 aa		11.18	□□□□□ -0.62
CSNK1E-213	ENST00000495232	C19orf53	Q9UNZ5	99 aa	Predicted RBP	11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms