RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 LRRC9Q6ZRR7 1453 aa3.59□□□□□ -1.84
SMC4-224ENST00000494612 TRBV2A0A0J9YWF9 115 aa3.58□□□□□ -1.84
SMC4-224ENST00000494612 TMEM89A2RUT3 159 aa3.58□□□□□ -1.84
SMC4-224ENST00000494612 KRT87PA6NCN2 255 aa3.58□□□□□ -1.84
SMC4-224ENST00000494612 MEI4A8MW99 385 aa3.58□□□□□ -1.84
SMC4-224ENST00000494612 LRP3O75074 770 aa3.58□□□□□ -1.84
SMC4-224ENST00000494612 CSDE1O75534 798 aaKnown RBP3.58□□□□□ -1.84
SMC4-224ENST00000494612 SYNGR4O95473 234 aa3.58□□□□□ -1.84
SMC4-224ENST00000494612 ALPPP05187 535 aa3.58□□□□□ -1.84
SMC4-224ENST00000494612 CCDC192P0DO97 292 aa3.58□□□□□ -1.84
SMC4-224ENST00000494612 ALPPL2P10696 532 aa3.58□□□□□ -1.84
SMC4-224ENST00000494612 PRDX6P30041 224 aa3.58□□□□□ -1.84
SMC4-224ENST00000494612 AKT2P31751 481 aa3.58□□□□□ -1.84
SMC4-224ENST00000494612 SFNP31947 248 aa3.58□□□□□ -1.84
SMC4-224ENST00000494612 TNFRSF4P43489 277 aa3.58□□□□□ -1.84
SMC4-224ENST00000494612 SLC1A6P48664 564 aa3.58□□□□□ -1.84
SMC4-224ENST00000494612 ACY1Q03154 408 aa3.58□□□□□ -1.84
SMC4-224ENST00000494612 HSPA14Q0VDF9 509 aa3.58□□□□□ -1.84
SMC4-224ENST00000494612 TSTA3Q13630 321 aaPredicted RBP3.58□□□□□ -1.84
SMC4-224ENST00000494612 KLF5Q13887 457 aaPredicted RBP3.58□□□□□ -1.84
SMC4-224ENST00000494612 FASTKQ14296 549 aaKnown RBP3.58□□□□□ -1.84
SMC4-224ENST00000494612 EMC2Q15006 297 aa3.58□□□□□ -1.84
SMC4-224ENST00000494612 CLPPQ16740 277 aaPredicted RBP3.58□□□□□ -1.84
SMC4-224ENST00000494612 KRTAP13-3Q3SY46 172 aa3.58□□□□□ -1.84
SMC4-224ENST00000494612 GLIPR1L2Q4G1C9 344 aa3.58□□□□□ -1.84
SMC4-224ENST00000494612 UNC50Q53HI1 259 aa3.58□□□□□ -1.84
SMC4-224ENST00000494612 LIPKQ5VXJ0 399 aa3.58□□□□□ -1.84
SMC4-224ENST00000494612 HIST2H2AA3Q6FI13 130 aa3.58□□□□□ -1.84
SMC4-224ENST00000494612 FAAP20Q6NZ36 180 aa3.58□□□□□ -1.84
SMC4-224ENST00000494612 SH2D6Q7Z4S9 175 aa3.58□□□□□ -1.84
SMC4-224ENST00000494612 SAMD12Q8N8I0 201 aa3.58□□□□□ -1.84
SMC4-224ENST00000494612 OR4F5Q8NH21 305 aa3.58□□□□□ -1.84
SMC4-224ENST00000494612 SLC13A3Q8WWT9 602 aa3.58□□□□□ -1.84
SMC4-224ENST00000494612 PNPLA2Q96AD5 504 aa3.58□□□□□ -1.84
SMC4-224ENST00000494612 COQ7Q99807 217 aa3.58□□□□□ -1.84
SMC4-224ENST00000494612 RBM4BQ9BQ04 359 aaKnown RBP3.58□□□□□ -1.84
SMC4-224ENST00000494612 SIRPDQ9H106 197 aa3.58□□□□□ -1.84
SMC4-224ENST00000494612 TRPV6Q9H1D0 765 aa3.58□□□□□ -1.84
SMC4-224ENST00000494612 DCTPP1Q9H773 170 aa3.58□□□□□ -1.84
SMC4-224ENST00000494612 IL1RL2Q9HB29 575 aa3.58□□□□□ -1.84
SMC4-224ENST00000494612 HPS4Q9NQG7 708 aa3.58□□□□□ -1.84
SMC4-224ENST00000494612 GTSE1Q9NYZ3 720 aa3.58□□□□□ -1.84
SMC4-224ENST00000494612 SPASTQ9UBP0 616 aa3.58□□□□□ -1.84
SMC4-224ENST00000494612 DNPEPQ9ULA0 475 aa3.58□□□□□ -1.84
SMC4-224ENST00000494612 ENTPD4Q9Y227 616 aa3.58□□□□□ -1.84
SMC4-224ENST00000494612 SLC6A5Q9Y345 797 aa3.58□□□□□ -1.84
SMC4-224ENST00000494612 ATG4BQ9Y4P1 393 aa3.58□□□□□ -1.84
SMC4-224ENST00000494612 CPQQ9Y646 472 aa3.58□□□□□ -1.84
SMC4-224ENST00000494612 JCADQ9P266 1359 aa3.58□□□□□ -1.84
SMC4-224ENST00000494612 CASKIN1Q8WXD9 1431 aa3.58□□□□□ -1.84
SMC4-224ENST00000494612 SCAF11Q99590 1463 aaKnown RBP3.58□□□□□ -1.84
SMC4-224ENST00000494612 A0A1B0GTH9 108 aa3.57□□□□□ -1.84
SMC4-224ENST00000494612 CFAP73A6NFT4 308 aa3.57□□□□□ -1.84
SMC4-224ENST00000494612 SLC9B1P1A6NJY1 282 aa3.57□□□□□ -1.84
SMC4-224ENST00000494612 RTEL1-TNFRSF6BF6WH68 1400 aa3.57□□□□□ -1.84
SMC4-224ENST00000494612 HTATSF1O43719 755 aaKnown RBP3.57□□□□□ -1.84
SMC4-224ENST00000494612 IGHG3P01860 377 aa3.57□□□□□ -1.84
SMC4-224ENST00000494612 ETS1P14921 441 aa3.57□□□□□ -1.84
SMC4-224ENST00000494612 GSK3BP49841 420 aa3.57□□□□□ -1.84
SMC4-224ENST00000494612 CCL11P51671 97 aa3.57□□□□□ -1.84
SMC4-224ENST00000494612 ZNF131P52739 623 aa3.57□□□□□ -1.84
SMC4-224ENST00000494612 TMEM94Q12767 1356 aa3.57□□□□□ -1.84
SMC4-224ENST00000494612 POM121L1PQ3SYA9 428 aa3.57□□□□□ -1.84
SMC4-224ENST00000494612 CCDC40Q4G0X9 1142 aa3.57□□□□□ -1.84
SMC4-224ENST00000494612 MTUS2Q5JR59 1369 aa3.57□□□□□ -1.84
SMC4-224ENST00000494612 GPRASP1Q5JY77 1395 aa3.57□□□□□ -1.84
SMC4-224ENST00000494612 LDLRAP1Q5SW96 308 aa3.57□□□□□ -1.84
SMC4-224ENST00000494612 DDI2Q5TDH0 399 aa3.57□□□□□ -1.84
SMC4-224ENST00000494612 LEMD1Q68G75 181 aa3.57□□□□□ -1.84
SMC4-224ENST00000494612 EMBQ6PCB8 327 aa3.57□□□□□ -1.84
SMC4-224ENST00000494612 METTL7BQ6UX53 244 aa3.57□□□□□ -1.84
SMC4-224ENST00000494612 MFSD7Q6UXD7 560 aa3.57□□□□□ -1.84
SMC4-224ENST00000494612 ZNF841Q6ZN19 808 aa3.57□□□□□ -1.84
SMC4-224ENST00000494612 TMEM26Q6ZUK4 368 aa3.57□□□□□ -1.84
SMC4-224ENST00000494612 ASRGL1Q7L266 308 aa3.57□□□□□ -1.84
SMC4-224ENST00000494612 NUFIP2Q7Z417 695 aaKnown RBP3.57□□□□□ -1.84
SMC4-224ENST00000494612 SLC25A42Q86VD7 318 aa3.57□□□□□ -1.84
SMC4-224ENST00000494612 UBR1Q8IWV7 1749 aa3.57□□□□□ -1.84
SMC4-224ENST00000494612 GVQW1Q8N7I0 195 aa3.57□□□□□ -1.84
SMC4-224ENST00000494612 OR8H1Q8NGG4 311 aa3.57□□□□□ -1.84
SMC4-224ENST00000494612 GOLGA5Q8TBA6 731 aa3.57□□□□□ -1.84
SMC4-224ENST00000494612 FBXO25Q8TCJ0 367 aa3.57□□□□□ -1.84
SMC4-224ENST00000494612 HSD17B14Q9BPX1 270 aa3.57□□□□□ -1.84
SMC4-224ENST00000494612 FYCO1Q9BQS8 1478 aa3.57□□□□□ -1.84
SMC4-224ENST00000494612 NLNQ9BYT8 704 aa3.57□□□□□ -1.84
SMC4-224ENST00000494612 OCR1Q9BZK8 76 aa3.57□□□□□ -1.84
SMC4-224ENST00000494612 RNF41Q9H4P4 317 aaPredicted RBP3.57□□□□□ -1.84
SMC4-224ENST00000494612 PANK3Q9H999 370 aa3.57□□□□□ -1.84
SMC4-224ENST00000494612 ADGRL4Q9HBW9 690 aa3.57□□□□□ -1.84
SMC4-224ENST00000494612 CLIP2Q9UDT6 1046 aa3.57□□□□□ -1.84
SMC4-224ENST00000494612 NPC1L1Q9UHC9 1359 aa3.57□□□□□ -1.84
SMC4-224ENST00000494612 KLHDC2Q9Y2U9 406 aa3.57□□□□□ -1.84
SMC4-224ENST00000494612 MRPS2Q9Y399 296 aaKnown RBP3.57□□□□□ -1.84
SMC4-224ENST00000494612 ERVK-7P63135 1459 aa3.56□□□□□ -1.84
SMC4-224ENST00000494612 MSH6P52701 1360 aa3.56□□□□□ -1.84
SMC4-224ENST00000494612 ARHGAP42A6NI28 874 aa3.56□□□□□ -1.84
SMC4-224ENST00000494612 CHEK1O14757 476 aa3.56□□□□□ -1.84
SMC4-224ENST00000494612 NME2P1O60361 137 aa3.56□□□□□ -1.84
SMC4-224ENST00000494612 GALR3O60755 368 aaPredicted RBP3.56□□□□□ -1.84
SMC4-224ENST00000494612 MT-ATP6P00846 226 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms