RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 DUSP8Q13202 625 aa30.54■■■□□ 2.48
CBX4-203ENST00000494546 PCLAFQ15004 111 aa30.54■■■□□ 2.48
CBX4-203ENST00000494546 NNATQ16517 81 aa30.54■■■□□ 2.48
CBX4-203ENST00000494546 HYAL4Q2M3T9 481 aa30.54■■■□□ 2.48
CBX4-203ENST00000494546 TRMT12Q53H54 448 aaKnown RBP30.54■■■□□ 2.48
CBX4-203ENST00000494546 EMBQ6PCB8 327 aa30.54■■■□□ 2.48
CBX4-203ENST00000494546 TRABD2AQ86V40 505 aa30.54■■■□□ 2.48
CBX4-203ENST00000494546 SRRM1Q8IYB3 904 aaKnown RBP30.54■■■□□ 2.48
CBX4-203ENST00000494546 C17orf47Q8NEP4 570 aa30.54■■■□□ 2.48
CBX4-203ENST00000494546 OR52R1Q8NGF1 315 aa30.54■■■□□ 2.48
CBX4-203ENST00000494546 PHF10Q8WUB8 498 aaKnown RBP30.54■■■□□ 2.48
CBX4-203ENST00000494546 DIO2Q92813 273 aa30.54■■■□□ 2.48
CBX4-203ENST00000494546 DMRTA2Q96SC8 542 aa30.54■■■□□ 2.48
CBX4-203ENST00000494546 DOHHQ9BU89 302 aa30.54■■■□□ 2.48
CBX4-203ENST00000494546 NXF5Q9H1B4 397 aaKnown RBP30.54■■■□□ 2.48
CBX4-203ENST00000494546 PROK2Q9HC23 129 aa30.54■■■□□ 2.48
CBX4-203ENST00000494546 GIMAP4Q9NUV9 329 aa30.54■■■□□ 2.48
CBX4-203ENST00000494546 ENTPD4Q9Y227 616 aa30.54■■■□□ 2.48
CBX4-203ENST00000494546 NPIPA2E9PIF3 369 aa30.53■■■□□ 2.48
CBX4-203ENST00000494546 NPIPA3F8WFD2 350 aa30.53■■■□□ 2.48
CBX4-203ENST00000494546 ZNF500O60304 480 aaPredicted RBP30.53■■■□□ 2.48
CBX4-203ENST00000494546 UROSP10746 265 aa30.53■■■□□ 2.48
CBX4-203ENST00000494546 PCSK2P16519 638 aa30.53■■■□□ 2.48
CBX4-203ENST00000494546 GRNP28799 593 aaKnown RBP30.53■■■□□ 2.48
CBX4-203ENST00000494546 SLC10A1Q14973 349 aa30.53■■■□□ 2.48
CBX4-203ENST00000494546 CLEC6AQ6EIG7 209 aa30.53■■■□□ 2.48
CBX4-203ENST00000494546 TRIM46Q7Z4K8 759 aa30.53■■■□□ 2.48
CBX4-203ENST00000494546 SLC34A3Q8N130 599 aa30.53■■■□□ 2.48
CBX4-203ENST00000494546 BANPQ8N9N5 519 aa30.53■■■□□ 2.48
CBX4-203ENST00000494546 CTHRC1Q96CG8 243 aa30.53■■■□□ 2.48
CBX4-203ENST00000494546 SMC6Q96SB8 1091 aa30.53■■■□□ 2.48
CBX4-203ENST00000494546 ITPAQ9BY32 194 aa30.53■■■□□ 2.48
CBX4-203ENST00000494546 LDAHQ9H6V9 325 aa30.53■■■□□ 2.48
CBX4-203ENST00000494546 ZFP64Q9NPA5 681 aa30.53■■■□□ 2.48
CBX4-203ENST00000494546 SIRT5Q9NXA8 310 aa30.53■■■□□ 2.48
CBX4-203ENST00000494546 MKS1Q9NXB0 559 aa30.53■■■□□ 2.48
CBX4-203ENST00000494546 HRH3Q9Y5N1 445 aa30.53■■■□□ 2.48
CBX4-203ENST00000494546 CBX7O95931 251 aa30.52■■■□□ 2.48
CBX4-203ENST00000494546 IGHG3P01860 377 aa30.52■■■□□ 2.48
CBX4-203ENST00000494546 AGAP20933 346 aa30.52■■■□□ 2.48
CBX4-203ENST00000494546 HTR1EP28566 365 aa30.52■■■□□ 2.48
CBX4-203ENST00000494546 SOX18P35713 384 aa30.52■■■□□ 2.48
CBX4-203ENST00000494546 ZNF763Q0D2J5 394 aa30.52■■■□□ 2.48
CBX4-203ENST00000494546 WDR93Q6P2C0 686 aa30.52■■■□□ 2.48
CBX4-203ENST00000494546 TRILQ7L0X0 811 aa30.52■■■□□ 2.48
CBX4-203ENST00000494546 SAMD14Q8IZD0 417 aaPredicted RBP30.52■■■□□ 2.48
CBX4-203ENST00000494546 GATA5Q9BWX5 397 aaPredicted RBP30.52■■■□□ 2.48
CBX4-203ENST00000494546 RRAGDQ9NQL2 400 aaPredicted RBP30.52■■■□□ 2.48
CBX4-203ENST00000494546 LGALS13Q9UHV8 139 aa30.52■■■□□ 2.48
CBX4-203ENST00000494546 POLR3HQ9Y535 204 aaPredicted RBP30.52■■■□□ 2.48
CBX4-203ENST00000494546 UNC79Q9P2D8 2635 aa30.51■■■□□ 2.48
CBX4-203ENST00000494546 TRIM13O60858 407 aa30.51■■■□□ 2.47
CBX4-203ENST00000494546 RFPL3SP0C7P2 107 aa30.51■■■□□ 2.47
CBX4-203ENST00000494546 ABCD3P28288 659 aa30.51■■■□□ 2.47
CBX4-203ENST00000494546 GSTM5P46439 218 aa30.51■■■□□ 2.47
CBX4-203ENST00000494546 C2orf80Q0P641 193 aa30.51■■■□□ 2.47
CBX4-203ENST00000494546 ZNF628Q5EBL2 1059 aa30.51■■■□□ 2.47
CBX4-203ENST00000494546 OR9A2Q8NGT5 310 aa30.51■■■□□ 2.47
CBX4-203ENST00000494546 SPPL2AQ8TCT8 520 aa30.51■■■□□ 2.47
CBX4-203ENST00000494546 FAM111AQ96PZ2 611 aa30.51■■■□□ 2.47
CBX4-203ENST00000494546 ROPN1BQ9BZX4 212 aaPredicted RBP30.51■■■□□ 2.47
CBX4-203ENST00000494546 TP63Q9H3D4 680 aaPredicted RBP30.51■■■□□ 2.47
CBX4-203ENST00000494546 EXO5Q9H790 373 aa30.51■■■□□ 2.47
CBX4-203ENST00000494546 ROPN1Q9HAT0 212 aaPredicted RBP30.51■■■□□ 2.47
CBX4-203ENST00000494546 SLC35C2Q9NQQ7 365 aa30.51■■■□□ 2.47
CBX4-203ENST00000494546 FIS1Q9Y3D6 152 aa30.51■■■□□ 2.47
CBX4-203ENST00000494546 LRRC3CA6NJW4 275 aa30.5■■■□□ 2.47
CBX4-203ENST00000494546 SPAG7O75391 227 aa30.5■■■□□ 2.47
CBX4-203ENST00000494546 RSL1D1O76021 490 aaKnown RBP30.5■■■□□ 2.47
CBX4-203ENST00000494546 CDSNQ15517 529 aa30.5■■■□□ 2.47
CBX4-203ENST00000494546 EMC4Q5J8M3 183 aa30.5■■■□□ 2.47
CBX4-203ENST00000494546 TBCELQ5QJ74 424 aa30.5■■■□□ 2.47
CBX4-203ENST00000494546 BICRALQ6AI39 1079 aa30.5■■■□□ 2.47
CBX4-203ENST00000494546 KAT2AQ92830 837 aa30.5■■■□□ 2.47
CBX4-203ENST00000494546 CAVIN3Q969G5 261 aa30.5■■■□□ 2.47
CBX4-203ENST00000494546 ZNF703Q9H7S9 590 aaPredicted RBP30.5■■■□□ 2.47
CBX4-203ENST00000494546 ANKRA2Q9H9E1 313 aa30.5■■■□□ 2.47
CBX4-203ENST00000494546 TNFRSF10DQ9UBN6 386 aa30.5■■■□□ 2.47
CBX4-203ENST00000494546 PRODH2Q9UF12 536 aa30.5■■■□□ 2.47
CBX4-203ENST00000494546 MAN2A2P49641 1150 aa30.49■■■□□ 2.47
CBX4-203ENST00000494546 RPP38P78345 283 aaKnown RBP30.49■■■□□ 2.47
CBX4-203ENST00000494546 ZNF630Q2M218 657 aaPredicted RBP30.49■■■□□ 2.47
CBX4-203ENST00000494546 OR5M9Q8NGP3 310 aa30.49■■■□□ 2.47
CBX4-203ENST00000494546 ZNF675Q8TD23 568 aa30.49■■■□□ 2.47
CBX4-203ENST00000494546 LCORQ96JN0 433 aaPredicted RBP30.49■■■□□ 2.47
CBX4-203ENST00000494546 ZNF597Q96LX8 424 aa30.49■■■□□ 2.47
CBX4-203ENST00000494546 EHD3Q9NZN3 535 aa30.49■■■□□ 2.47
CBX4-203ENST00000494546 SLC17A7Q9P2U7 560 aa30.49■■■□□ 2.47
CBX4-203ENST00000494546 PTGDR2Q9Y5Y4 395 aa30.49■■■□□ 2.47
CBX4-203ENST00000494546 NCOA6Q14686 2063 aaPredicted RBP30.48■■■□□ 2.47
CBX4-203ENST00000494546 A0A1B0GVC2 190 aa30.48■■■□□ 2.47
CBX4-203ENST00000494546 ANKRD33BA6NCL7 494 aa30.48■■■□□ 2.47
CBX4-203ENST00000494546 OR14I1A6ND48 311 aa30.48■■■□□ 2.47
CBX4-203ENST00000494546 HNRNPRO43390 633 aaKnown RBP30.48■■■□□ 2.47
CBX4-203ENST00000494546 DDCP20711 480 aa30.48■■■□□ 2.47
CBX4-203ENST00000494546 ALDH3A1P30838 453 aa30.48■■■□□ 2.47
CBX4-203ENST00000494546 EMDP50402 254 aa30.48■■■□□ 2.47
CBX4-203ENST00000494546 GXYLT1Q4G148 440 aa30.48■■■□□ 2.47
CBX4-203ENST00000494546 TMEM198Q66K66 360 aa30.48■■■□□ 2.47
CBX4-203ENST00000494546 MARVELD3Q96A59 401 aa30.48■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms