RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 OR4C15Q8NGM1 316 aa13.01□□□□□ -0.33
VCP-207ENST00000493886 OR8K5Q8NH50 307 aa13.01□□□□□ -0.33
VCP-207ENST00000493886 RPLP0P6Q8NHW5 317 aa13.01□□□□□ -0.33
VCP-207ENST00000493886 RAB8BQ92930 207 aa13.01□□□□□ -0.33
VCP-207ENST00000493886 SARGQ9BW04 601 aa13.01□□□□□ -0.33
VCP-207ENST00000493886 DSN1Q9H410 356 aa13.01□□□□□ -0.33
VCP-207ENST00000493886 SCPEP1Q9HB40 452 aa13.01□□□□□ -0.33
VCP-207ENST00000493886 PRDM7Q9NQW5 492 aa13.01□□□□□ -0.33
VCP-207ENST00000493886 EHD3Q9NZN3 535 aa13.01□□□□□ -0.33
VCP-207ENST00000493886 BRWD1Q9NSI6 2320 aa13.01□□□□□ -0.33
VCP-207ENST00000493886 J3KTA2 159 aa13.01□□□□□ -0.33
VCP-207ENST00000493886 AIREO43918 545 aa13.01□□□□□ -0.33
VCP-207ENST00000493886 CHRM5P08912 532 aaPredicted RBP13.01□□□□□ -0.33
VCP-207ENST00000493886 HNRNPA2B1P22626 353 aaKnown RBP13.01□□□□□ -0.33
VCP-207ENST00000493886 GRK5P34947 590 aa13.01□□□□□ -0.33
VCP-207ENST00000493886 SLC19A1P41440 591 aa13.01□□□□□ -0.33
VCP-207ENST00000493886 CRISP3P54108 245 aa13.01□□□□□ -0.33
VCP-207ENST00000493886 TP53BP2Q13625 1128 aa13.01□□□□□ -0.33
VCP-207ENST00000493886 TOMM20Q15388 145 aa13.01□□□□□ -0.33
VCP-207ENST00000493886 TOR1AIP1Q5JTV8 583 aa13.01□□□□□ -0.33
VCP-207ENST00000493886 TMEM31Q5JXX7 168 aa13.01□□□□□ -0.33
VCP-207ENST00000493886 ABHD17CQ6PCB6 329 aa13.01□□□□□ -0.33
VCP-207ENST00000493886 WASH2PQ6VEQ5 465 aa13.01□□□□□ -0.33
VCP-207ENST00000493886 PRSS48Q7RTY5 328 aa13.01□□□□□ -0.33
VCP-207ENST00000493886 TRIM69Q86WT6 500 aa13.01□□□□□ -0.33
VCP-207ENST00000493886 GATAD2AQ86YP4 633 aa13.01□□□□□ -0.33
VCP-207ENST00000493886 SLC44A2Q8IWA5 706 aaPredicted RBP13.01□□□□□ -0.33
VCP-207ENST00000493886 SLC5A8Q8N695 610 aa13.01□□□□□ -0.33
VCP-207ENST00000493886 SMRP1Q8NCR6 262 aa13.01□□□□□ -0.33
VCP-207ENST00000493886 OR10G2Q8NGC3 310 aa13.01□□□□□ -0.33
VCP-207ENST00000493886 OR9Q2Q8NGE9 314 aa13.01□□□□□ -0.33
VCP-207ENST00000493886 CCL4L1Q8NHW4 92 aa13.01□□□□□ -0.33
VCP-207ENST00000493886 S100ZQ8WXG8 99 aa13.01□□□□□ -0.33
VCP-207ENST00000493886 TMEM19Q96HH6 336 aa13.01□□□□□ -0.33
VCP-207ENST00000493886 PITX2Q99697 317 aa13.01□□□□□ -0.33
VCP-207ENST00000493886 GLIPR2Q9H4G4 154 aa13.01□□□□□ -0.33
VCP-207ENST00000493886 C8orf33Q9H7E9 229 aaPredicted RBP13.01□□□□□ -0.33
VCP-207ENST00000493886 SLC35C2Q9NQQ7 365 aa13.01□□□□□ -0.33
VCP-207ENST00000493886 OR6C2Q9NZP2 312 aa13.01□□□□□ -0.33
VCP-207ENST00000493886 MDC1Q14676 2089 aaKnown RBP13.01□□□□□ -0.33
VCP-207ENST00000493886 WASHC1A8K0Z3 465 aa13□□□□□ -0.33
VCP-207ENST00000493886 PRKRAO75569 313 aaKnown RBP13□□□□□ -0.33
VCP-207ENST00000493886 DNAJB5O75953 348 aa13□□□□□ -0.33
VCP-207ENST00000493886 APBB3O95704 486 aa13□□□□□ -0.33
VCP-207ENST00000493886 HIST1H1TP22492 207 aaPredicted RBP13□□□□□ -0.33
VCP-207ENST00000493886 NDUFS1P28331 727 aa13□□□□□ -0.33
VCP-207ENST00000493886 CD40LGP29965 261 aa13□□□□□ -0.33
VCP-207ENST00000493886 XCR1P46094 333 aa13□□□□□ -0.33
VCP-207ENST00000493886 TPMTP51580 245 aa13□□□□□ -0.33
VCP-207ENST00000493886 SLAMF1Q13291 335 aa13□□□□□ -0.33
VCP-207ENST00000493886 DUSP7Q16829 419 aa13□□□□□ -0.33
VCP-207ENST00000493886 PROX2Q3B8N5 592 aa13□□□□□ -0.33
VCP-207ENST00000493886 ZNF425Q6IV72 752 aa13□□□□□ -0.33
VCP-207ENST00000493886 PLEKHG7Q6ZR37 379 aa13□□□□□ -0.33
VCP-207ENST00000493886 MFSD9Q8NBP5 474 aa13□□□□□ -0.33
VCP-207ENST00000493886 OR2L5Q8NG80 312 aa13□□□□□ -0.33
VCP-207ENST00000493886 ITPKCQ96DU7 683 aa13□□□□□ -0.33
VCP-207ENST00000493886 AMDHD1Q96NU7 426 aa13□□□□□ -0.33
VCP-207ENST00000493886 GABARAPL3Q9BY60 117 aa13□□□□□ -0.33
VCP-207ENST00000493886 LDHAL6BQ9BYZ2 381 aaPredicted RBP13□□□□□ -0.33
VCP-207ENST00000493886 SYNPO2LQ9H987 977 aa13□□□□□ -0.33
VCP-207ENST00000493886 ZNF624Q9P2J8 865 aaPredicted RBP13□□□□□ -0.33
VCP-207ENST00000493886 CAB39Q9Y376 341 aaPredicted RBP13□□□□□ -0.33
VCP-207ENST00000493886 COL4A2P08572 1712 aa13□□□□□ -0.33
VCP-207ENST00000493886 GLOD5A6NK44 160 aa13□□□□□ -0.33
VCP-207ENST00000493886 E9PQ18 207 aa13□□□□□ -0.33
VCP-207ENST00000493886 HMGN4O00479 90 aa13□□□□□ -0.33
VCP-207ENST00000493886 AQP9O43315 295 aa13□□□□□ -0.33
VCP-207ENST00000493886 TGM1P22735 817 aa13□□□□□ -0.33
VCP-207ENST00000493886 ATP5A1P25705 553 aaKnown RBP13□□□□□ -0.33
VCP-207ENST00000493886 GTF2E2P29084 291 aaKnown RBP13□□□□□ -0.33
VCP-207ENST00000493886 ACTR1BP42025 376 aa13□□□□□ -0.33
VCP-207ENST00000493886 ACTR1AP61163 376 aa13□□□□□ -0.33
VCP-207ENST00000493886 GANABQ14697 944 aaKnown RBP13□□□□□ -0.33
VCP-207ENST00000493886 EXOC3L2Q2M3D2 409 aa13□□□□□ -0.33
VCP-207ENST00000493886 MRM1Q6IN84 353 aaKnown RBP13□□□□□ -0.33
VCP-207ENST00000493886 ACOT4Q8N9L9 421 aa13□□□□□ -0.33
VCP-207ENST00000493886 PIP5K1AQ99755 562 aa13□□□□□ -0.33
VCP-207ENST00000493886 NIPSNAP1Q9BPW8 284 aa13□□□□□ -0.33
VCP-207ENST00000493886 TMEM168Q9H0V1 697 aa13□□□□□ -0.33
VCP-207ENST00000493886 RHCGQ9UBD6 479 aa13□□□□□ -0.33
VCP-207ENST00000493886 SNX7Q9UNH6 387 aa13□□□□□ -0.33
VCP-207ENST00000493886 ASB4Q9Y574 426 aa13□□□□□ -0.33
VCP-207ENST00000493886 ENPP4Q9Y6X5 453 aa13□□□□□ -0.33
VCP-207ENST00000493886 MAN2B1O00754 1011 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 RECKO95980 971 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 STSP08842 583 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 CTRB1P17538 263 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 GPC1P35052 558 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 CXCR4P61073 352 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 TFF2Q03403 129 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 TIGD6Q17RP2 521 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 MICAQ29983 383 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 CTRB2Q6GPI1 263 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 LGI4Q8N135 537 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 GTPBP3Q969Y2 492 aaKnown RBP12.99□□□□□ -0.33
VCP-207ENST00000493886 ITPAQ9BY32 194 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 SERHL2Q9H4I8 314 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 FANCFQ9NPI8 374 aa12.99□□□□□ -0.33
VCP-207ENST00000493886 CD207Q9UJ71 328 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms