RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 NYNRINQ9P2P1 1898 aaKnown RBP6.52□□□□□ -1.37
VPS13B-205ENST00000493587 M0R129 80 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 PIP5K1BO14986 540 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 SLC16A4O15374 487 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 SEMA7AO75326 666 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 ANXA2P07355 339 aaKnown RBP6.52□□□□□ -1.37
VPS13B-205ENST00000493587 CTPS1P17812 591 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 NRG1Q02297 640 aaPredicted RBP6.52□□□□□ -1.37
VPS13B-205ENST00000493587 NHLH2Q02577 135 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 IFRD2Q12894 506 aaPredicted RBP6.52□□□□□ -1.37
VPS13B-205ENST00000493587 C1DQ13901 141 aaKnown RBP6.52□□□□□ -1.37
VPS13B-205ENST00000493587 ODF4Q2M2E3 257 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 OR52W1Q6IF63 320 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 C8orf82Q6P1X6 216 aaPredicted RBP6.52□□□□□ -1.37
VPS13B-205ENST00000493587 SPNS3Q6ZMD2 512 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 PDZD3Q86UT5 571 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 OR4F6Q8NGB9 312 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 OR1S1Q8NH92 325 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 RSC1A1Q92681 617 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 WBP1Q96G27 269 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 OCSTAMPQ9BR26 566 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 C2orf88Q9BSF0 95 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 BCO1Q9HAY6 547 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 GLRX2Q9NS18 164 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 ACSS1Q9NUB1 689 aaPredicted RBP6.52□□□□□ -1.37
VPS13B-205ENST00000493587 CFAP97Q9P2B7 532 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 RBPJLQ9UBG7 517 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 TMEFF2Q9UIK5 374 aaPredicted RBP6.52□□□□□ -1.37
VPS13B-205ENST00000493587 NDRG4Q9ULP0 352 aaKnown RBP6.52□□□□□ -1.37
VPS13B-205ENST00000493587 RNF215Q9Y6U7 377 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 IFRD1O00458 451 aaPredicted RBP6.52□□□□□ -1.37
VPS13B-205ENST00000493587 EEF1E1O43324 174 aaKnown RBP6.52□□□□□ -1.37
VPS13B-205ENST00000493587 CIDEAO60543 219 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 GLUD1P00367 558 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 C4BPAP04003 597 aaKnown RBP6.52□□□□□ -1.37
VPS13B-205ENST00000493587 QDPRP09417 244 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 PPP3R1P63098 170 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 NPRL3Q12980 569 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 ZNF235Q14590 738 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 SURF2Q15527 256 aaPredicted RBP6.52□□□□□ -1.37
VPS13B-205ENST00000493587 FAM187BQ17R55 369 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 SCGB2B2Q4G0G5 96 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 ARTNQ5T4W7 220 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 CAPN13Q6MZZ7 669 aaPredicted RBP6.52□□□□□ -1.37
VPS13B-205ENST00000493587 TMEM107Q6UX40 140 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 BAIAP2L2Q6UXY1 529 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.52□□□□□ -1.37
VPS13B-205ENST00000493587 SKA3Q8IX90 412 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 LRRC18Q8N456 261 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 COLGALT1Q8NBJ5 622 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 CCDC54Q8NEL0 328 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 ZNF707Q96C28 371 aaPredicted RBP6.52□□□□□ -1.37
VPS13B-205ENST00000493587 ZC3HAV1LQ96H79 300 aaKnown RBP6.52□□□□□ -1.37
VPS13B-205ENST00000493587 MS4A4AQ96JQ5 239 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 ACBD6Q9BR61 282 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 CACNG6Q9BXT2 260 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 REEP1Q9H902 201 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 ASF1BQ9NVP2 202 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 WBP1LQ9NX94 342 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 IL17BQ9UHF5 180 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 PSORS1C1Q9UIG5 152 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 PTPRSQ13332 1948 aa6.52□□□□□ -1.37
VPS13B-205ENST00000493587 PLXNA4Q9HCM2 1894 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 C5orf58C9J3I9 102 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 DDX39AO00148 427 aaKnown RBP6.51□□□□□ -1.37
VPS13B-205ENST00000493587 QSOX1O00391 747 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 STK25O00506 426 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 CXCR6O00574 342 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 UBFD1O14562 309 aaKnown RBP6.51□□□□□ -1.37
VPS13B-205ENST00000493587 UGDHO60701 494 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 SIX3O95343 332 aaPredicted RBP6.51□□□□□ -1.37
VPS13B-205ENST00000493587 JCHAINP01591 159 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 H2AFB2P0C5Z0 115 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 PPP3CBP16298 524 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 TPSB2P20231 275 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 NFYBP25208 207 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 GIFP27352 417 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 HTR2AP28223 471 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 ABCD3P28288 659 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 POLR2JP52435 117 aaKnown RBP6.51□□□□□ -1.37
VPS13B-205ENST00000493587 ZNF155Q12901 538 aaPredicted RBP6.51□□□□□ -1.37
VPS13B-205ENST00000493587 ILKQ13418 452 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 TPSAB1Q15661 275 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 TAZQ16635 292 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 NDUFAF6Q330K2 333 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 DMRTA1Q5VZB9 504 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 ADAM5Q6NVV9 412 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 ESRP1Q6NXG1 681 aaKnown RBP6.51□□□□□ -1.37
VPS13B-205ENST00000493587 CFAP161Q6P656 301 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 GPR152Q8TDT2 470 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 TM9SF4Q92544 642 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 RFT1Q96AA3 541 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 MRPL38Q96DV4 380 aaKnown RBP6.51□□□□□ -1.37
VPS13B-205ENST00000493587 FAM122AQ96E09 287 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 CGRRF1Q99675 332 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 SEBOXQ9HB31 216 aaPredicted RBP6.51□□□□□ -1.37
VPS13B-205ENST00000493587 MS4A12Q9NXJ0 267 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 GRHPRQ9UBQ7 328 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 FKBPLQ9UIM3 349 aa6.51□□□□□ -1.37
VPS13B-205ENST00000493587 ASF1AQ9Y294 204 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms