RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 DDX18Q9NVP1 670 aaKnown RBP16.01■□□□□ 0.15
LIME1-208ENST00000493265 TAS2R9Q9NYW1 312 aa16.01■□□□□ 0.15
LIME1-208ENST00000493265 BTNL2Q9UIR0 455 aa16.01■□□□□ 0.15
LIME1-208ENST00000493265 LEF1Q9UJU2 399 aaPredicted RBP16.01■□□□□ 0.15
LIME1-208ENST00000493265 MAN2B2Q9Y2E5 1009 aa16.01■□□□□ 0.15
LIME1-208ENST00000493265 MAST4O15021 2626 aa16.01■□□□□ 0.15
LIME1-208ENST00000493265 FBP2O00757 339 aa16■□□□□ 0.15
LIME1-208ENST00000493265 GALNSP34059 522 aa16■□□□□ 0.15
LIME1-208ENST00000493265 MLC1Q15049 377 aa16■□□□□ 0.15
LIME1-208ENST00000493265 SPRED3Q2MJR0 410 aa16■□□□□ 0.15
LIME1-208ENST00000493265 MSANTD1Q6ZTZ1 278 aa16■□□□□ 0.15
LIME1-208ENST00000493265 RETREG3Q86VR2 466 aa16■□□□□ 0.15
LIME1-208ENST00000493265 KIF2BQ8N4N8 673 aa16■□□□□ 0.15
LIME1-208ENST00000493265 MORN4Q8NDC4 146 aa16■□□□□ 0.15
LIME1-208ENST00000493265 NFAM1Q8NET5 270 aaPredicted RBP16■□□□□ 0.15
LIME1-208ENST00000493265 OR52R1Q8NGF1 315 aa16■□□□□ 0.15
LIME1-208ENST00000493265 ZNF675Q8TD23 568 aa16■□□□□ 0.15
LIME1-208ENST00000493265 GTF2H4Q92759 462 aa16■□□□□ 0.15
LIME1-208ENST00000493265 NACC2Q96BF6 587 aa16■□□□□ 0.15
LIME1-208ENST00000493265 FBXL20Q96IG2 436 aa16■□□□□ 0.15
LIME1-208ENST00000493265 ART5Q96L15 291 aa16■□□□□ 0.15
LIME1-208ENST00000493265 IMMP1LQ96LU5 166 aa16■□□□□ 0.15
LIME1-208ENST00000493265 C3orf14Q9HBI5 128 aa16■□□□□ 0.15
LIME1-208ENST00000493265 EQTNQ9NQ60 294 aa16■□□□□ 0.15
LIME1-208ENST00000493265 SERHLQ9NQF3 203 aa16■□□□□ 0.15
LIME1-208ENST00000493265 SIRT3Q9NTG7 399 aaPredicted RBP16■□□□□ 0.15
LIME1-208ENST00000493265 ARL8BQ9NVJ2 186 aa16■□□□□ 0.15
LIME1-208ENST00000493265 COPS7AQ9UBW8 275 aa16■□□□□ 0.15
LIME1-208ENST00000493265 VPS4AQ9UN37 437 aa16■□□□□ 0.15
LIME1-208ENST00000493265 ERVK-11Q9UQG0 969 aa16■□□□□ 0.15
LIME1-208ENST00000493265 POLHQ9Y253 713 aa16■□□□□ 0.15
LIME1-208ENST00000493265 TRBV11-1A0A0K0K1C0 115 aa15.99■□□□□ 0.15
LIME1-208ENST00000493265 DYTNA2CJ06 578 aa15.99■□□□□ 0.15
LIME1-208ENST00000493265 CAPN14A8MX76 684 aa15.99■□□□□ 0.15
LIME1-208ENST00000493265 MRASO14807 208 aa15.99■□□□□ 0.15
LIME1-208ENST00000493265 S1PR1P21453 382 aa15.99■□□□□ 0.15
LIME1-208ENST00000493265 SOX18P35713 384 aa15.99■□□□□ 0.15
LIME1-208ENST00000493265 CPA2P48052 419 aa15.99■□□□□ 0.15
LIME1-208ENST00000493265 CCT3P49368 545 aaKnown RBP15.99■□□□□ 0.15
LIME1-208ENST00000493265 TP53BP2Q13625 1128 aa15.99■□□□□ 0.15
LIME1-208ENST00000493265 TERF2Q15554 542 aa15.99■□□□□ 0.15
LIME1-208ENST00000493265 EXT1Q16394 746 aa15.99■□□□□ 0.15
LIME1-208ENST00000493265 GTDC1Q4AE62 458 aa15.99■□□□□ 0.15
LIME1-208ENST00000493265 REP15Q6BDI9 236 aa15.99■□□□□ 0.15
LIME1-208ENST00000493265 ANGPTL8Q6UXH0 198 aa15.99■□□□□ 0.15
LIME1-208ENST00000493265 RNF111Q6ZNA4 994 aa15.99■□□□□ 0.15
LIME1-208ENST00000493265 NUP43Q8NFH3 380 aa15.99■□□□□ 0.15
LIME1-208ENST00000493265 OR1N1Q8NGS0 311 aa15.99■□□□□ 0.15
LIME1-208ENST00000493265 RP9Q8TA86 221 aaKnown RBP15.99■□□□□ 0.15
LIME1-208ENST00000493265 ZNF721Q8TF20 911 aa15.99■□□□□ 0.15
LIME1-208ENST00000493265 THAP3Q8WTV1 239 aaPredicted RBP15.99■□□□□ 0.15
LIME1-208ENST00000493265 THAP4Q8WY91 577 aa15.99■□□□□ 0.15
LIME1-208ENST00000493265 RCN3Q96D15 328 aa15.99■□□□□ 0.15
LIME1-208ENST00000493265 CMTM5Q96DZ9 223 aa15.99■□□□□ 0.15
LIME1-208ENST00000493265 FER1L6-AS2Q96M78 137 aa15.99■□□□□ 0.15
LIME1-208ENST00000493265 OR10A5Q9H207 317 aa15.99■□□□□ 0.15
LIME1-208ENST00000493265 NEUROD4Q9HD90 331 aa15.99■□□□□ 0.15
LIME1-208ENST00000493265 SLC6A13Q9NSD5 602 aa15.99■□□□□ 0.15
LIME1-208ENST00000493265 ZCCHC3Q9NUD5 404 aaKnown RBP15.99■□□□□ 0.15
LIME1-208ENST00000493265 SLAMF8Q9P0V8 285 aa15.99■□□□□ 0.15
LIME1-208ENST00000493265 PTGFRNQ9P2B2 879 aa15.99■□□□□ 0.15
LIME1-208ENST00000493265 HECTD1Q9ULT8 2610 aa15.99■□□□□ 0.15
LIME1-208ENST00000493265 RNF103-CHMP3A0A140T963 221 aa15.98■□□□□ 0.15
LIME1-208ENST00000493265 A6NL46 340 aa15.98■□□□□ 0.15
LIME1-208ENST00000493265 UPK1AO00322 258 aa15.98■□□□□ 0.15
LIME1-208ENST00000493265 AIM2O14862 343 aa15.98■□□□□ 0.15
LIME1-208ENST00000493265 EMC8O43402 210 aa15.98■□□□□ 0.15
LIME1-208ENST00000493265 PRKNO60260 465 aaPredicted RBP15.98■□□□□ 0.15
LIME1-208ENST00000493265 KCNH1O95259 989 aa15.98■□□□□ 0.15
LIME1-208ENST00000493265 CBX7O95931 251 aa15.98■□□□□ 0.15
LIME1-208ENST00000493265 CHI3L1P36222 383 aaPredicted RBP15.98■□□□□ 0.15
LIME1-208ENST00000493265 CASP9P55211 416 aa15.98■□□□□ 0.15
LIME1-208ENST00000493265 KCNC4Q03721 635 aa15.98■□□□□ 0.15
LIME1-208ENST00000493265 LRRC74AQ0VAA2 488 aa15.98■□□□□ 0.15
LIME1-208ENST00000493265 Q0VFX4 171 aa15.98■□□□□ 0.15
LIME1-208ENST00000493265 FUT7Q11130 342 aa15.98■□□□□ 0.15
LIME1-208ENST00000493265 NFATC3Q12968 1075 aa15.98■□□□□ 0.15
LIME1-208ENST00000493265 STX5Q13190 355 aa15.98■□□□□ 0.15
LIME1-208ENST00000493265 DUSP8Q13202 625 aa15.98■□□□□ 0.15
LIME1-208ENST00000493265 GAB1Q13480 694 aa15.98■□□□□ 0.15
LIME1-208ENST00000493265 NFYCQ13952 458 aa15.98■□□□□ 0.15
LIME1-208ENST00000493265 DCAF10Q5QP82 559 aa15.98■□□□□ 0.15
LIME1-208ENST00000493265 FHL5Q5TD97 284 aa15.98■□□□□ 0.15
LIME1-208ENST00000493265 PLAG1Q6DJT9 500 aa15.98■□□□□ 0.15
LIME1-208ENST00000493265 TRPM8Q7Z2W7 1104 aa15.98■□□□□ 0.15
LIME1-208ENST00000493265 KBTBD2Q8IY47 623 aa15.98■□□□□ 0.15
LIME1-208ENST00000493265 CLEC1AQ8NC01 280 aa15.98■□□□□ 0.15
LIME1-208ENST00000493265 FBXO30Q8TB52 745 aa15.98■□□□□ 0.15
LIME1-208ENST00000493265 TSPEARQ8WU66 669 aa15.98■□□□□ 0.15
LIME1-208ENST00000493265 CTHRC1Q96CG8 243 aa15.98■□□□□ 0.15
LIME1-208ENST00000493265 FAM120BQ96EK7 910 aaKnown RBP15.98■□□□□ 0.15
LIME1-208ENST00000493265 VMP1Q96GC9 406 aa15.98■□□□□ 0.15
LIME1-208ENST00000493265 GAL3ST4Q96RP7 486 aa15.98■□□□□ 0.15
LIME1-208ENST00000493265 SLC35A5Q9BS91 424 aa15.98■□□□□ 0.15
LIME1-208ENST00000493265 YIPF4Q9BSR8 244 aa15.98■□□□□ 0.15
LIME1-208ENST00000493265 TRIM4Q9C037 500 aa15.98■□□□□ 0.15
LIME1-208ENST00000493265 PAIP1Q9H074 479 aaKnown RBP15.98■□□□□ 0.15
LIME1-208ENST00000493265 A0A1W2PQ72 361 aa15.97■□□□□ 0.15
LIME1-208ENST00000493265 BBIP1A8MTZ0 92 aa15.97■□□□□ 0.15
LIME1-208ENST00000493265 A8MUI8 341 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms