RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 MEX3BQ6ZN04 569 aaKnown RBP15.24■□□□□ 0.03
PDLIM2-217ENST00000491330 SH2D5Q6ZV89 423 aa15.24■□□□□ 0.03
PDLIM2-217ENST00000491330 NUP54Q7Z3B4 507 aa15.24■□□□□ 0.03
PDLIM2-217ENST00000491330 FGD2Q7Z6J4 655 aa15.24■□□□□ 0.03
PDLIM2-217ENST00000491330 CHERPQ8IWX8 916 aaKnown RBP15.24■□□□□ 0.03
PDLIM2-217ENST00000491330 PM20D2Q8IYS1 436 aa15.24■□□□□ 0.03
PDLIM2-217ENST00000491330 MREGQ8N565 214 aa15.24■□□□□ 0.03
PDLIM2-217ENST00000491330 DOK4Q8TEW6 326 aa15.24■□□□□ 0.03
PDLIM2-217ENST00000491330 TMCO6Q96DC7 493 aa15.24■□□□□ 0.03
PDLIM2-217ENST00000491330 MID1IP1Q9NPA3 183 aa15.24■□□□□ 0.03
PDLIM2-217ENST00000491330 RRAGDQ9NQL2 400 aaPredicted RBP15.24■□□□□ 0.03
PDLIM2-217ENST00000491330 FARSBQ9NSD9 589 aaKnown RBP15.24■□□□□ 0.03
PDLIM2-217ENST00000491330 CHCHD2Q9Y6H1 151 aaPredicted RBP15.24■□□□□ 0.03
PDLIM2-217ENST00000491330 UNC79Q9P2D8 2635 aa15.24■□□□□ 0.03
PDLIM2-217ENST00000491330 C15orf38-AP3S2A0A0A6YYH1 394 aa15.23■□□□□ 0.03
PDLIM2-217ENST00000491330 SERTM1A2A2V5 107 aa15.23■□□□□ 0.03
PDLIM2-217ENST00000491330 COPEO14579 308 aa15.23■□□□□ 0.03
PDLIM2-217ENST00000491330 ADAM10O14672 748 aa15.23■□□□□ 0.03
PDLIM2-217ENST00000491330 ZNHIT1O43257 154 aa15.23■□□□□ 0.03
PDLIM2-217ENST00000491330 CHEK2O96017 543 aa15.23■□□□□ 0.03
PDLIM2-217ENST00000491330 SHBGP04278 402 aa15.23■□□□□ 0.03
PDLIM2-217ENST00000491330 PEX19P40855 299 aa15.23■□□□□ 0.03
PDLIM2-217ENST00000491330 ZFP36L2P47974 494 aaKnown RBP15.23■□□□□ 0.03
PDLIM2-217ENST00000491330 SLC18A2Q05940 514 aa15.23■□□□□ 0.03
PDLIM2-217ENST00000491330 IFFO1Q0D2I5 559 aa15.23■□□□□ 0.03
PDLIM2-217ENST00000491330 FOXO1Q12778 655 aa15.23■□□□□ 0.03
PDLIM2-217ENST00000491330 ZYG11AQ6WRX3 759 aa15.23■□□□□ 0.03
PDLIM2-217ENST00000491330 CROCCP2Q86T23 111 aa15.23■□□□□ 0.03
PDLIM2-217ENST00000491330 NEIL3Q8TAT5 605 aa15.23■□□□□ 0.03
PDLIM2-217ENST00000491330 SPPL2AQ8TCT8 520 aa15.23■□□□□ 0.03
PDLIM2-217ENST00000491330 AENQ8WTP8 325 aaKnown RBP15.23■□□□□ 0.03
PDLIM2-217ENST00000491330 TM4SF18Q96CE8 201 aa15.23■□□□□ 0.03
PDLIM2-217ENST00000491330 LCORQ96JN0 433 aaPredicted RBP15.23■□□□□ 0.03
PDLIM2-217ENST00000491330 TMEM237Q96Q45 408 aa15.23■□□□□ 0.03
PDLIM2-217ENST00000491330 STMN4Q9H169 189 aaPredicted RBP15.23■□□□□ 0.03
PDLIM2-217ENST00000491330 MIEF1Q9NQG6 463 aa15.23■□□□□ 0.03
PDLIM2-217ENST00000491330 PNPLA3Q9NST1 481 aa15.23■□□□□ 0.03
PDLIM2-217ENST00000491330 RNF6Q9Y252 685 aa15.23■□□□□ 0.03
PDLIM2-217ENST00000491330 DLGAP4Q9Y2H0 992 aa15.23■□□□□ 0.03
PDLIM2-217ENST00000491330 WBP11Q9Y2W2 641 aaKnown RBP15.23■□□□□ 0.03
PDLIM2-217ENST00000491330 MYO7BQ6PIF6 2116 aa15.23■□□□□ 0.03
PDLIM2-217ENST00000491330 A0A0G2JMM0 328 aa15.22■□□□□ 0.03
PDLIM2-217ENST00000491330 A0A1W2PPB8 328 aa15.22■□□□□ 0.03
PDLIM2-217ENST00000491330 A0A1W2PRS3 328 aa15.22■□□□□ 0.03
PDLIM2-217ENST00000491330 HSPB2A8KAH6 182 aa15.22■□□□□ 0.03
PDLIM2-217ENST00000491330 KIR3DP1A8MWS1 328 aa15.22■□□□□ 0.03
PDLIM2-217ENST00000491330 AHRRA9YTQ3 701 aa15.22■□□□□ 0.03
PDLIM2-217ENST00000491330 ABCB7O75027 752 aa15.22■□□□□ 0.03
PDLIM2-217ENST00000491330 PPM1BO75688 479 aa15.22■□□□□ 0.03
PDLIM2-217ENST00000491330 ANXA4P09525 319 aaPredicted RBP15.22■□□□□ 0.03
PDLIM2-217ENST00000491330 DDX5P17844 614 aaKnown RBP15.22■□□□□ 0.03
PDLIM2-217ENST00000491330 KRT4P19013 534 aa15.22■□□□□ 0.03
PDLIM2-217ENST00000491330 PLCXD2Q0VAA5 305 aa15.22■□□□□ 0.03
PDLIM2-217ENST00000491330 GALNT1Q10472 559 aaPredicted RBP15.22■□□□□ 0.03
PDLIM2-217ENST00000491330 SNTA1Q13424 505 aa15.22■□□□□ 0.03
PDLIM2-217ENST00000491330 HSPB2Q16082 182 aa15.22■□□□□ 0.03
PDLIM2-217ENST00000491330 C1orf185Q5T7R7 199 aa15.22■□□□□ 0.03
PDLIM2-217ENST00000491330 SLC30A6Q6NXT4 461 aa15.22■□□□□ 0.03
PDLIM2-217ENST00000491330 SCIMPQ6UWF3 145 aa15.22■□□□□ 0.03
PDLIM2-217ENST00000491330 RPS27LQ71UM5 84 aaKnown RBP15.22■□□□□ 0.03
PDLIM2-217ENST00000491330 ZNF615Q8N8J6 731 aa15.22■□□□□ 0.03
PDLIM2-217ENST00000491330 ADCY4Q8NFM4 1077 aa15.22■□□□□ 0.03
PDLIM2-217ENST00000491330 OR1J4Q8NGS1 313 aa15.22■□□□□ 0.03
PDLIM2-217ENST00000491330 METTL2AQ96IZ6 378 aaKnown RBP15.22■□□□□ 0.03
PDLIM2-217ENST00000491330 RILPQ96NA2 401 aa15.22■□□□□ 0.03
PDLIM2-217ENST00000491330 BBS4Q96RK4 519 aa15.22■□□□□ 0.03
PDLIM2-217ENST00000491330 HBEGFQ99075 208 aa15.22■□□□□ 0.03
PDLIM2-217ENST00000491330 TTYH2Q9BSA4 534 aa15.22■□□□□ 0.03
PDLIM2-217ENST00000491330 TRMOQ9BU70 441 aa15.22■□□□□ 0.03
PDLIM2-217ENST00000491330 TMEM109Q9BVC6 243 aa15.22■□□□□ 0.03
PDLIM2-217ENST00000491330 ANGPTL4Q9BY76 406 aa15.22■□□□□ 0.03
PDLIM2-217ENST00000491330 ZNF703Q9H7S9 590 aaPredicted RBP15.22■□□□□ 0.03
PDLIM2-217ENST00000491330 SH2D2AQ9NP31 389 aa15.22■□□□□ 0.03
PDLIM2-217ENST00000491330 KLRF1Q9NZS2 232 aa15.22■□□□□ 0.03
PDLIM2-217ENST00000491330 LGALS13Q9UHV8 139 aa15.22■□□□□ 0.03
PDLIM2-217ENST00000491330 SPENQ96T58 3664 aaKnown RBP15.21■□□□□ 0.03
PDLIM2-217ENST00000491330 CROCCQ5TZA2 2017 aa15.21■□□□□ 0.03
PDLIM2-217ENST00000491330 FAM90A27PA6NNH2 459 aa15.21■□□□□ 0.03
PDLIM2-217ENST00000491330 PPP6CO00743 305 aa15.21■□□□□ 0.03
PDLIM2-217ENST00000491330 PLIN3O60664 434 aa15.21■□□□□ 0.03
PDLIM2-217ENST00000491330 ZNF354AO60765 605 aaPredicted RBP15.21■□□□□ 0.03
PDLIM2-217ENST00000491330 SLITRK5O94991 958 aa15.21■□□□□ 0.03
PDLIM2-217ENST00000491330 PROCP04070 461 aa15.21■□□□□ 0.03
PDLIM2-217ENST00000491330 DRD5P21918 477 aa15.21■□□□□ 0.03
PDLIM2-217ENST00000491330 ABCD3P28288 659 aa15.21■□□□□ 0.03
PDLIM2-217ENST00000491330 PPICP45877 212 aa15.21■□□□□ 0.03
PDLIM2-217ENST00000491330 NUP107P57740 925 aa15.21■□□□□ 0.03
PDLIM2-217ENST00000491330 FBXW4P57775 412 aa15.21■□□□□ 0.03
PDLIM2-217ENST00000491330 BTKQ06187 659 aa15.21■□□□□ 0.03
PDLIM2-217ENST00000491330 PRICKLE4Q2TBC4 344 aa15.21■□□□□ 0.03
PDLIM2-217ENST00000491330 LYPD8Q6UX82 237 aa15.21■□□□□ 0.03
PDLIM2-217ENST00000491330 LURAP1LQ8IV03 231 aa15.21■□□□□ 0.03
PDLIM2-217ENST00000491330 ZNF441Q8N8Z8 693 aa15.21■□□□□ 0.03
PDLIM2-217ENST00000491330 C14orf79Q96F83 325 aa15.21■□□□□ 0.03
PDLIM2-217ENST00000491330 TAS2R9Q9NYW1 312 aa15.21■□□□□ 0.03
PDLIM2-217ENST00000491330 EHD3Q9NZN3 535 aa15.21■□□□□ 0.03
PDLIM2-217ENST00000491330 MRTO4Q9UKD2 239 aaKnown RBP15.21■□□□□ 0.03
PDLIM2-217ENST00000491330 CNOT11Q9UKZ1 510 aaKnown RBP15.21■□□□□ 0.03
PDLIM2-217ENST00000491330 A0A1W2PPM1 405 aa15.2■□□□□ 0.02
PDLIM2-217ENST00000491330 COQ9O75208 318 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms