RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 ECHDC2Q86YB7 292 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 TMEM139Q8IV31 216 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 CHERPQ8IWX8 916 aaKnown RBP2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 KATNAL2Q8IYT4 538 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 SLC38A6Q8IZM9 456 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 FAM9CQ8IZT9 166 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 CRYBG2Q8N1P7 616 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 ANKFN1Q8N957 763 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 LRTM2Q8N967 370 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 FAM184AQ8NB25 1140 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 OR4K1Q8NGD4 311 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 OR9K2Q8NGE7 335 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 RNF128Q8TEB7 428 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 TMED6Q8WW62 240 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 PIGCQ92535 297 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 EMG1Q92979 244 aaKnown RBP2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 ISG20Q96AZ6 181 aaKnown RBP2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 RAB39BQ96DA2 213 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 C12orf66Q96MD2 445 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 ANKRD27Q96NW4 1050 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 RPRD1AQ96P16 312 aaPredicted RBP2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 DEFB118Q96PH6 123 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 MTERF1Q99551 399 aaKnown RBP2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 C11orf70Q9BRQ4 267 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 RIOK1Q9BRS2 568 aaKnown RBP2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 LLPHQ9BRT6 129 aaKnown RBP2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 MTG1Q9BT17 334 aaPredicted RBP2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 STRADBQ9C0K7 418 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 ARRDC1-AS1Q9H2J1 176 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 ZNF556Q9HAH1 456 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 ELOVL3Q9HB03 270 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 MIOSQ9NXC5 875 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 PKD2L2Q9NZM6 624 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 C1RLQ9NZP8 487 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 ICAM5Q9UMF0 924 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 PACSIN2Q9UNF0 486 aaPredicted RBP2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 CRB1P82279 1406 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 SMG6Q86US8 1419 aaKnown RBP2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 CGNL1Q0VF96 1302 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 LTN1O94822 1766 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 UTRNP46939 3433 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 MEGF6O75095 1541 aa2.87□□□□□ -1.95
DEPDC1-204ENST00000489862 TRAV18A0A075B6X5 111 aa2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 A0A0U1RQS6 177 aa2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 RNF13O43567 381 aa2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 EXTL3O43909 919 aa2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 RPS6KA5O75582 802 aa2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 UPK3AO75631 287 aa2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 PDE9AO76083 593 aa2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 EPOP01588 193 aa2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 PNMTP11086 282 aa2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 TSPAN8P19075 237 aa2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 UCP1P25874 307 aa2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 HTR2AP28223 471 aa2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 GNL1P36915 607 aaPredicted RBP2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 FDFT1P37268 417 aa2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 SLC6A8P48029 635 aa2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 LEPRP48357 1165 aaKnown RBP2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 CSNK1EP49674 416 aaKnown RBP2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 CLCN4P51793 760 aa2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 NAAAQ02083 359 aa2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 MBTD1Q05BQ5 628 aa2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 DNAJC3Q13217 504 aa2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 ENPP2Q13822 863 aa2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 BTG3Q14201 252 aaPredicted RBP2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 TMEM52BQ4KMG9 183 aa2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 GPAT3Q53EU6 434 aa2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 ZNF542PQ5EBM4 170 aa2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 PRAMEF5Q5TYX0 476 aa2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 PRAMEF6Q5VXH4 476 aa2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 TTC19Q6DKK2 380 aaPredicted RBP2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 UGT3A1Q6NUS8 523 aa2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 C8orf82Q6P1X6 216 aaPredicted RBP2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 SPSB3Q6PJ21 355 aa2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 TMEM220Q6QAJ8 160 aa2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 BLOC1S2Q6QNY1 142 aa2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 CREB3L2Q70SY1 520 aa2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 CPEB2Q7Z5Q1 589 aaKnown RBP2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 ZNF329Q86UD4 541 aa2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 COMMD2Q86X83 199 aa2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 CBWD2Q8IUF1 395 aa2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 C1orf52Q8N6N3 182 aaKnown RBP2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 RELL2Q8NC24 303 aaPredicted RBP2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 OR14A16Q8NHC5 309 aa2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 SLC38A5Q8WUX1 472 aa2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 SLC35F5Q8WV83 523 aa2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 ITFG2Q969R8 447 aa2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 DHX58Q96C10 678 aa2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 DHTKD1Q96HY7 919 aaPredicted RBP2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 ZNF333Q96JL9 665 aa2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 ATP6V1G3Q96LB4 118 aa2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 ZNF396Q96N95 335 aaPredicted RBP2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 TSSK2Q96PF2 358 aa2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 OR1F2PQ96R84 312 aa2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 PLIN2Q99541 437 aa2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 C1QTNF4Q9BXJ3 329 aa2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 PRRG4Q9BZD6 226 aa2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 VN1R1Q9GZP7 353 aa2.86□□□□□ -1.95
DEPDC1-204ENST00000489862 RHBGQ9H310 441 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms