RNA–Protein interactions for RNA: ENST00000489712.6

NF1-213, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-213ENST00000489712 NDC80O14777 642 aa2.2□□□□□ -2.06
NF1-213ENST00000489712 PRPSAP2O60256 369 aa2.2□□□□□ -2.06
NF1-213ENST00000489712 GJB5O95377 273 aa2.2□□□□□ -2.06
NF1-213ENST00000489712 OLFM2O95897 454 aa2.2□□□□□ -2.06
NF1-213ENST00000489712 GH1P01241 217 aa2.2□□□□□ -2.06
NF1-213ENST00000489712 C8orf89P0DMQ9 161 aa2.2□□□□□ -2.06
NF1-213ENST00000489712 CCDC192P0DO97 292 aa2.2□□□□□ -2.06
NF1-213ENST00000489712 UROSP10746 265 aa2.2□□□□□ -2.06
NF1-213ENST00000489712 OR1D2P34982 312 aa2.2□□□□□ -2.06
NF1-213ENST00000489712 NME5P56597 212 aa2.2□□□□□ -2.06
NF1-213ENST00000489712 IL1RL1Q01638 556 aa2.2□□□□□ -2.06
NF1-213ENST00000489712 LASP1Q14847 261 aaKnown RBP2.2□□□□□ -2.06
NF1-213ENST00000489712 SPHARQ15513 63 aa2.2□□□□□ -2.06
NF1-213ENST00000489712 IFI44LQ53G44 452 aa2.2□□□□□ -2.06
NF1-213ENST00000489712 DDI2Q5TDH0 399 aa2.2□□□□□ -2.06
NF1-213ENST00000489712 MIER3Q7Z3K6 550 aa2.2□□□□□ -2.06
NF1-213ENST00000489712 APOBEC3FQ8IUX4 373 aaKnown RBP2.2□□□□□ -2.06
NF1-213ENST00000489712 GPR137CQ8N3F9 429 aa2.2□□□□□ -2.06
NF1-213ENST00000489712 FBXW8Q8N3Y1 598 aa2.2□□□□□ -2.06
NF1-213ENST00000489712 OR4F5Q8NH21 305 aa2.2□□□□□ -2.06
NF1-213ENST00000489712 ST7LQ8TDW4 575 aa2.2□□□□□ -2.06
NF1-213ENST00000489712 FRAT1Q92837 279 aaPredicted RBP2.2□□□□□ -2.06
NF1-213ENST00000489712 PNPLA2Q96AD5 504 aa2.2□□□□□ -2.06
NF1-213ENST00000489712 SLCO4A1Q96BD0 722 aa2.2□□□□□ -2.06
NF1-213ENST00000489712 C16orf45Q96MC5 204 aaPredicted RBP2.2□□□□□ -2.06
NF1-213ENST00000489712 CASD1Q96PB1 797 aa2.2□□□□□ -2.06
NF1-213ENST00000489712 TMEM237Q96Q45 408 aa2.2□□□□□ -2.06
NF1-213ENST00000489712 PRAM1Q96QH2 718 aa2.2□□□□□ -2.06
NF1-213ENST00000489712 RUFY1Q96T51 708 aa2.2□□□□□ -2.06
NF1-213ENST00000489712 S1PR3Q99500 378 aa2.2□□□□□ -2.06
NF1-213ENST00000489712 SSX3Q99909 188 aa2.2□□□□□ -2.06
NF1-213ENST00000489712 ZNF559Q9BR84 538 aa2.2□□□□□ -2.06
NF1-213ENST00000489712 ST6GALNAC5Q9BVH7 336 aa2.2□□□□□ -2.06
NF1-213ENST00000489712 KRT23Q9C075 422 aa2.2□□□□□ -2.06
NF1-213ENST00000489712 MYOZ2Q9NPC6 264 aa2.2□□□□□ -2.06
NF1-213ENST00000489712 ANO10Q9NW15 660 aa2.2□□□□□ -2.06
NF1-213ENST00000489712 CNIH4Q9P003 139 aa2.2□□□□□ -2.06
NF1-213ENST00000489712 TMEM9Q9P0T7 183 aa2.2□□□□□ -2.06
NF1-213ENST00000489712 MAGEB16A2A368 324 aa2.19□□□□□ -2.06
NF1-213ENST00000489712 SLC15A5A6NIM6 579 aa2.19□□□□□ -2.06
NF1-213ENST00000489712 ST8SIA3O43173 380 aa2.19□□□□□ -2.06
NF1-213ENST00000489712 NOL3O60936 208 aaKnown RBP2.19□□□□□ -2.06
NF1-213ENST00000489712 HSF2BPO75031 334 aa2.19□□□□□ -2.06
NF1-213ENST00000489712 REC8O95072 547 aa2.19□□□□□ -2.06
NF1-213ENST00000489712 ACTL6AO96019 429 aa2.19□□□□□ -2.06
NF1-213ENST00000489712 GOT2P00505 430 aaKnown RBP2.19□□□□□ -2.06
NF1-213ENST00000489712 PROS1P07225 676 aa2.19□□□□□ -2.06
NF1-213ENST00000489712 SBK2P0C263 348 aa2.19□□□□□ -2.06
NF1-213ENST00000489712 SLC35E2P0CK97 266 aa2.19□□□□□ -2.06
NF1-213ENST00000489712 CD1EP15812 388 aa2.19□□□□□ -2.06
NF1-213ENST00000489712 ARF4P18085 180 aaPredicted RBP2.19□□□□□ -2.06
NF1-213ENST00000489712 FRKP42685 505 aaPredicted RBP2.19□□□□□ -2.06
NF1-213ENST00000489712 MTIF2P46199 727 aaKnown RBP2.19□□□□□ -2.06
NF1-213ENST00000489712 KCNJ1P48048 391 aa2.19□□□□□ -2.06
NF1-213ENST00000489712 P2RY4P51582 365 aa2.19□□□□□ -2.06
NF1-213ENST00000489712 POLR2FP61218 127 aaKnown RBP2.19□□□□□ -2.06
NF1-213ENST00000489712 GFPT1Q06210 699 aaPredicted RBP2.19□□□□□ -2.06
NF1-213ENST00000489712 GABPAQ06546 454 aa2.19□□□□□ -2.06
NF1-213ENST00000489712 CKAP4Q07065 602 aaKnown RBP2.19□□□□□ -2.06
NF1-213ENST00000489712 C17orf67Q0P5P2 114 aa2.19□□□□□ -2.06
NF1-213ENST00000489712 RPS6KA1Q15418 735 aa2.19□□□□□ -2.06
NF1-213ENST00000489712 SLC39A12Q504Y0 691 aa2.19□□□□□ -2.06
NF1-213ENST00000489712 PAN3Q58A45 887 aaKnown RBP2.19□□□□□ -2.06
NF1-213ENST00000489712 FAM219BQ5XKK7 198 aa2.19□□□□□ -2.06
NF1-213ENST00000489712 IGFL2Q6UWQ7 119 aa2.19□□□□□ -2.06
NF1-213ENST00000489712 RABEPKQ7Z6M1 372 aa2.19□□□□□ -2.06
NF1-213ENST00000489712 WDR49Q8IV35 697 aa2.19□□□□□ -2.06
NF1-213ENST00000489712 HDDC3Q8N4P3 179 aa2.19□□□□□ -2.06
NF1-213ENST00000489712 UXS1Q8NBZ7 420 aa2.19□□□□□ -2.06
NF1-213ENST00000489712 NEK11Q8NG66 645 aa2.19□□□□□ -2.06
NF1-213ENST00000489712 CCDC110Q8TBZ0 833 aa2.19□□□□□ -2.06
NF1-213ENST00000489712 FBXO25Q8TCJ0 367 aa2.19□□□□□ -2.06
NF1-213ENST00000489712 PRCCQ92733 491 aaPredicted RBP2.19□□□□□ -2.06
NF1-213ENST00000489712 ULK4Q96C45 1275 aa2.19□□□□□ -2.06
NF1-213ENST00000489712 SNRNP40Q96DI7 357 aaKnown RBP2.19□□□□□ -2.06
NF1-213ENST00000489712 CFAP36Q96G28 342 aa2.19□□□□□ -2.06
NF1-213ENST00000489712 VSIG2Q96IQ7 327 aa2.19□□□□□ -2.06
NF1-213ENST00000489712 NUSAP1Q9BXS6 441 aaKnown RBP2.19□□□□□ -2.06
NF1-213ENST00000489712 CACNG6Q9BXT2 260 aa2.19□□□□□ -2.06
NF1-213ENST00000489712 ZNF350Q9GZX5 532 aa2.19□□□□□ -2.06
NF1-213ENST00000489712 Q9HAA7 133 aa2.19□□□□□ -2.06
NF1-213ENST00000489712 RNPEPL1Q9HAU8 725 aa2.19□□□□□ -2.06
NF1-213ENST00000489712 KLRF1Q9NZS2 232 aa2.19□□□□□ -2.06
NF1-213ENST00000489712 RAI14Q9P0K7 980 aa2.19□□□□□ -2.06
NF1-213ENST00000489712 HMG20BQ9P0W2 317 aa2.19□□□□□ -2.06
NF1-213ENST00000489712 PRODH2Q9UF12 536 aa2.19□□□□□ -2.06
NF1-213ENST00000489712 KLHL21Q9UJP4 597 aa2.19□□□□□ -2.06
NF1-213ENST00000489712 A0A087X0K7 114 aa2.18□□□□□ -2.06
NF1-213ENST00000489712 SMIM30A4D0T7 59 aa2.18□□□□□ -2.06
NF1-213ENST00000489712 A8MX80 341 aa2.18□□□□□ -2.06
NF1-213ENST00000489712 CACNB4O00305 520 aaPredicted RBP2.18□□□□□ -2.06
NF1-213ENST00000489712 MPHOSPH10O00566 681 aaKnown RBP2.18□□□□□ -2.06
NF1-213ENST00000489712 BCAS2O75934 225 aaPredicted RBP2.18□□□□□ -2.06
NF1-213ENST00000489712 STBD1O95210 358 aa2.18□□□□□ -2.06
NF1-213ENST00000489712 GUCA1CO95843 209 aa2.18□□□□□ -2.06
NF1-213ENST00000489712 NUDT14O95848 222 aa2.18□□□□□ -2.06
NF1-213ENST00000489712 SLC4A1P02730 911 aa2.18□□□□□ -2.06
NF1-213ENST00000489712 LAMP1P11279 417 aa2.18□□□□□ -2.06
NF1-213ENST00000489712 FERP16591 822 aa2.18□□□□□ -2.06
NF1-213ENST00000489712 SLC12A3P55017 1021 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms