RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 DCTN4Q9UJW0 460 aa13.35□□□□□ -0.27
HLA-F-229ENST00000489502 EXPH5Q8NEV8 1989 aa13.34□□□□□ -0.27
HLA-F-229ENST00000489502 NBASA2RRP1 2371 aa13.34□□□□□ -0.27
HLA-F-229ENST00000489502 OR6C76A6NM76 312 aa13.34□□□□□ -0.27
HLA-F-229ENST00000489502 OR6B1O95007 311 aa13.34□□□□□ -0.27
HLA-F-229ENST00000489502 NADKO95544 446 aaPredicted RBP13.34□□□□□ -0.27
HLA-F-229ENST00000489502 VIMP08670 466 aaKnown RBP13.34□□□□□ -0.27
HLA-F-229ENST00000489502 CD96P40200 585 aa13.34□□□□□ -0.27
HLA-F-229ENST00000489502 CASRP41180 1078 aa13.34□□□□□ -0.27
HLA-F-229ENST00000489502 SOX3P41225 446 aa13.34□□□□□ -0.27
HLA-F-229ENST00000489502 FRKP42685 505 aaPredicted RBP13.34□□□□□ -0.27
HLA-F-229ENST00000489502 TNFSF10P50591 281 aa13.34□□□□□ -0.27
HLA-F-229ENST00000489502 SSR4P51571 173 aa13.34□□□□□ -0.27
HLA-F-229ENST00000489502 UFM1P61960 85 aa13.34□□□□□ -0.27
HLA-F-229ENST00000489502 ZNF155Q12901 538 aaPredicted RBP13.34□□□□□ -0.27
HLA-F-229ENST00000489502 OR1C1Q15619 314 aa13.34□□□□□ -0.27
HLA-F-229ENST00000489502 PRR30Q53SZ7 412 aaPredicted RBP13.34□□□□□ -0.27
HLA-F-229ENST00000489502 OR4F3Q6IEY1 312 aa13.34□□□□□ -0.27
HLA-F-229ENST00000489502 TMEM64Q6YI46 380 aa13.34□□□□□ -0.27
HLA-F-229ENST00000489502 Q6ZS92 163 aa13.34□□□□□ -0.27
HLA-F-229ENST00000489502 SZRD1Q7Z422 152 aa13.34□□□□□ -0.27
HLA-F-229ENST00000489502 TMEM156Q8N614 296 aa13.34□□□□□ -0.27
HLA-F-229ENST00000489502 OR5L2Q8NGL0 311 aa13.34□□□□□ -0.27
HLA-F-229ENST00000489502 CEP70Q8NHQ1 597 aa13.34□□□□□ -0.27
HLA-F-229ENST00000489502 ZFP28Q8NHY6 868 aa13.34□□□□□ -0.27
HLA-F-229ENST00000489502 ASB15Q8WXK1 588 aa13.34□□□□□ -0.27
HLA-F-229ENST00000489502 PNPLA2Q96AD5 504 aa13.34□□□□□ -0.27
HLA-F-229ENST00000489502 ZBED6CLQ96FA7 236 aaPredicted RBP13.34□□□□□ -0.27
HLA-F-229ENST00000489502 ATAD3AQ9NVI7 634 aa13.34□□□□□ -0.27
HLA-F-229ENST00000489502 DDX18Q9NVP1 670 aaKnown RBP13.34□□□□□ -0.27
HLA-F-229ENST00000489502 B3GNT3Q9Y2A9 372 aa13.34□□□□□ -0.27
HLA-F-229ENST00000489502 GPR45Q9Y5Y3 372 aa13.34□□□□□ -0.27
HLA-F-229ENST00000489502 SPENQ96T58 3664 aaKnown RBP13.34□□□□□ -0.27
HLA-F-229ENST00000489502 C2orf92A0A1B0GVN3 265 aa13.33□□□□□ -0.28
HLA-F-229ENST00000489502 UBDO15205 165 aa13.33□□□□□ -0.28
HLA-F-229ENST00000489502 PLOD3O60568 738 aa13.33□□□□□ -0.28
HLA-F-229ENST00000489502 SORBS2O94875 1100 aaKnown RBP13.33□□□□□ -0.28
HLA-F-229ENST00000489502 TGDSO95455 350 aa13.33□□□□□ -0.28
HLA-F-229ENST00000489502 C6orf47O95873 294 aa13.33□□□□□ -0.28
HLA-F-229ENST00000489502 IDO1P14902 403 aa13.33□□□□□ -0.28
HLA-F-229ENST00000489502 DDX5P17844 614 aaKnown RBP13.33□□□□□ -0.28
HLA-F-229ENST00000489502 IL12AP29459 219 aa13.33□□□□□ -0.28
HLA-F-229ENST00000489502 NR0B1P51843 470 aaKnown RBP13.33□□□□□ -0.28
HLA-F-229ENST00000489502 MANFP55145 182 aaKnown RBP13.33□□□□□ -0.28
HLA-F-229ENST00000489502 ZNF169Q14929 603 aaPredicted RBP13.33□□□□□ -0.28
HLA-F-229ENST00000489502 TLR1Q15399 786 aa13.33□□□□□ -0.28
HLA-F-229ENST00000489502 FAM174BQ3ZCQ3 159 aa13.33□□□□□ -0.28
HLA-F-229ENST00000489502 PLEKHN1Q494U1 663 aaPredicted RBP13.33□□□□□ -0.28
HLA-F-229ENST00000489502 SPANXN4Q5MJ08 99 aa13.33□□□□□ -0.28
HLA-F-229ENST00000489502 HLA-DQA1Q5Y7H0 255 aa13.33□□□□□ -0.28
HLA-F-229ENST00000489502 SPINK14Q6IE38 97 aa13.33□□□□□ -0.28
HLA-F-229ENST00000489502 CGB2Q6NT52 195 aa13.33□□□□□ -0.28
HLA-F-229ENST00000489502 PRICKLE2Q7Z3G6 844 aa13.33□□□□□ -0.28
HLA-F-229ENST00000489502 ZNF227Q86WZ6 799 aa13.33□□□□□ -0.28
HLA-F-229ENST00000489502 PRR22Q8IZ63 422 aa13.33□□□□□ -0.28
HLA-F-229ENST00000489502 CLECL1Q8IZS7 167 aa13.33□□□□□ -0.28
HLA-F-229ENST00000489502 CYP4Z2PQ8N1L4 340 aa13.33□□□□□ -0.28
HLA-F-229ENST00000489502 ZNF441Q8N8Z8 693 aa13.33□□□□□ -0.28
HLA-F-229ENST00000489502 MDS2Q8NDY4 140 aa13.33□□□□□ -0.28
HLA-F-229ENST00000489502 OR9I1Q8NGQ6 314 aa13.33□□□□□ -0.28
HLA-F-229ENST00000489502 HAS2Q92819 552 aa13.33□□□□□ -0.28
HLA-F-229ENST00000489502 COQ8BQ96D53 544 aa13.33□□□□□ -0.28
HLA-F-229ENST00000489502 PRPF18Q99633 342 aaKnown RBP13.33□□□□□ -0.28
HLA-F-229ENST00000489502 DUSP26Q9BV47 211 aa13.33□□□□□ -0.28
HLA-F-229ENST00000489502 NXF5Q9H1B4 397 aaKnown RBP13.33□□□□□ -0.28
HLA-F-229ENST00000489502 CLMPQ9H6B4 373 aa13.33□□□□□ -0.28
HLA-F-229ENST00000489502 CCDC134Q9H6E4 229 aa13.33□□□□□ -0.28
HLA-F-229ENST00000489502 FOLH1BQ9HBA9 442 aa13.33□□□□□ -0.28
HLA-F-229ENST00000489502 KLHL1Q9NR64 748 aa13.33□□□□□ -0.28
HLA-F-229ENST00000489502 ACSS1Q9NUB1 689 aaPredicted RBP13.33□□□□□ -0.28
HLA-F-229ENST00000489502 LRFN1Q9P244 771 aa13.33□□□□□ -0.28
HLA-F-229ENST00000489502 YARS2Q9Y2Z4 477 aaKnown RBP13.33□□□□□ -0.28
HLA-F-229ENST00000489502 HEMK1Q9Y5R4 338 aaPredicted RBP13.33□□□□□ -0.28
HLA-F-229ENST00000489502 NUP214P35658 2090 aaPredicted RBP13.33□□□□□ -0.28
HLA-F-229ENST00000489502 A0A087WV62 115 aa13.32□□□□□ -0.28
HLA-F-229ENST00000489502 TRAV17A0A0B4J275 112 aa13.32□□□□□ -0.28
HLA-F-229ENST00000489502 A0A0G2JND7 137 aa13.32□□□□□ -0.28
HLA-F-229ENST00000489502 A0A1W2PRB8 838 aa13.32□□□□□ -0.28
HLA-F-229ENST00000489502 A8MVJ9 347 aa13.32□□□□□ -0.28
HLA-F-229ENST00000489502 UPK1AO00322 258 aa13.32□□□□□ -0.28
HLA-F-229ENST00000489502 SLC25A12O75746 678 aa13.32□□□□□ -0.28
HLA-F-229ENST00000489502 NEURL1O76050 574 aa13.32□□□□□ -0.28
HLA-F-229ENST00000489502 ABCB1P08183 1280 aaPredicted RBP13.32□□□□□ -0.28
HLA-F-229ENST00000489502 TRHRP34981 398 aaPredicted RBP13.32□□□□□ -0.28
HLA-F-229ENST00000489502 KIR3DL1P43629 444 aa13.32□□□□□ -0.28
HLA-F-229ENST00000489502 CYB561P49447 251 aa13.32□□□□□ -0.28
HLA-F-229ENST00000489502 EMDP50402 254 aa13.32□□□□□ -0.28
HLA-F-229ENST00000489502 HLCSP50747 726 aa13.32□□□□□ -0.28
HLA-F-229ENST00000489502 DGKQP52824 942 aa13.32□□□□□ -0.28
HLA-F-229ENST00000489502 CLNS1AP54105 237 aaKnown RBP13.32□□□□□ -0.28
HLA-F-229ENST00000489502 GYS2P54840 703 aa13.32□□□□□ -0.28
HLA-F-229ENST00000489502 CORO7P57737 925 aa13.32□□□□□ -0.28
HLA-F-229ENST00000489502 RPS6KA2Q15349 733 aa13.32□□□□□ -0.28
HLA-F-229ENST00000489502 PDCD4Q53EL6 469 aaKnown RBP13.32□□□□□ -0.28
HLA-F-229ENST00000489502 IL20RBQ6UXL0 311 aa13.32□□□□□ -0.28
HLA-F-229ENST00000489502 NPSR1Q6W5P4 371 aa13.32□□□□□ -0.28
HLA-F-229ENST00000489502 WDR53Q7Z5U6 358 aaPredicted RBP13.32□□□□□ -0.28
HLA-F-229ENST00000489502 CAMKMTQ7Z624 323 aa13.32□□□□□ -0.28
HLA-F-229ENST00000489502 ANKRD46Q86W74 232 aa13.32□□□□□ -0.28
HLA-F-229ENST00000489502 FBXO30Q8TB52 745 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms