RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 CCDC25Q86WR0 208 aa10.3□□□□□ -0.76
HDAC6-233ENST00000489352 MUC15Q8N387 334 aa10.3□□□□□ -0.76
HDAC6-233ENST00000489352 LINC01356Q8N9X3 169 aa10.3□□□□□ -0.76
HDAC6-233ENST00000489352 ZNF540Q8NDQ6 660 aa10.3□□□□□ -0.76
HDAC6-233ENST00000489352 MS4A6EQ96DS6 147 aa10.3□□□□□ -0.76
HDAC6-233ENST00000489352 OSBPL11Q9BXB4 747 aa10.3□□□□□ -0.76
HDAC6-233ENST00000489352 ERVK-6Q9BXR3 956 aa10.3□□□□□ -0.76
HDAC6-233ENST00000489352 PARVBQ9HBI1 364 aa10.3□□□□□ -0.76
HDAC6-233ENST00000489352 KLHL42Q9P2K6 505 aa10.3□□□□□ -0.76
HDAC6-233ENST00000489352 ERVK-19Q9WJR5 959 aa10.3□□□□□ -0.76
HDAC6-233ENST00000489352 ZNF175Q9Y473 711 aa10.3□□□□□ -0.76
HDAC6-233ENST00000489352 PTGDR2Q9Y5Y4 395 aa10.3□□□□□ -0.76
HDAC6-233ENST00000489352 FKBP7Q9Y680 259 aa10.3□□□□□ -0.76
HDAC6-233ENST00000489352 CMYA5Q8N3K9 4069 aa10.29□□□□□ -0.76
HDAC6-233ENST00000489352 IGHV4-61A0A0C4DH41 118 aa10.29□□□□□ -0.76
HDAC6-233ENST00000489352 CTAGE15A4D2H0 777 aa10.29□□□□□ -0.76
HDAC6-233ENST00000489352 LRIT2A6NDA9 550 aa10.29□□□□□ -0.76
HDAC6-233ENST00000489352 VWC2LB2RUY7 222 aa10.29□□□□□ -0.76
HDAC6-233ENST00000489352 GOLGA8KD6RF30 607 aa10.29□□□□□ -0.76
HDAC6-233ENST00000489352 GOLGA8TH3BQL2 631 aa10.29□□□□□ -0.76
HDAC6-233ENST00000489352 H7C417 338 aa10.29□□□□□ -0.76
HDAC6-233ENST00000489352 H2AFYO75367 372 aaKnown RBP10.29□□□□□ -0.76
HDAC6-233ENST00000489352 COL6A2P12110 1019 aa10.29□□□□□ -0.76
HDAC6-233ENST00000489352 SRD5A2P31213 254 aa10.29□□□□□ -0.76
HDAC6-233ENST00000489352 RPS3AP61247 264 aaKnown RBP10.29□□□□□ -0.76
HDAC6-233ENST00000489352 REEP5Q00765 189 aa10.29□□□□□ -0.76
HDAC6-233ENST00000489352 CHRNB3Q05901 458 aa10.29□□□□□ -0.76
HDAC6-233ENST00000489352 TGM3Q08188 693 aa10.29□□□□□ -0.76
HDAC6-233ENST00000489352 CTBP1Q13363 440 aa10.29□□□□□ -0.76
HDAC6-233ENST00000489352 SLC18A3Q16572 532 aa10.29□□□□□ -0.76
HDAC6-233ENST00000489352 LRRC8EQ6NSJ5 796 aa10.29□□□□□ -0.76
HDAC6-233ENST00000489352 FIGNL1Q6PIW4 674 aa10.29□□□□□ -0.76
HDAC6-233ENST00000489352 DEF8Q6ZN54 512 aa10.29□□□□□ -0.76
HDAC6-233ENST00000489352 USP43Q70EL4 1123 aa10.29□□□□□ -0.76
HDAC6-233ENST00000489352 TMPRSS11BQ86T26 416 aa10.29□□□□□ -0.76
HDAC6-233ENST00000489352 CTAGE6Q86UF2 777 aa10.29□□□□□ -0.76
HDAC6-233ENST00000489352 OR4N5Q8IXE1 308 aa10.29□□□□□ -0.76
HDAC6-233ENST00000489352 PRR22Q8IZ63 422 aa10.29□□□□□ -0.76
HDAC6-233ENST00000489352 TTLQ8NG68 377 aa10.29□□□□□ -0.76
HDAC6-233ENST00000489352 OR2L5Q8NG80 312 aa10.29□□□□□ -0.76
HDAC6-233ENST00000489352 OR8K1Q8NGG5 319 aa10.29□□□□□ -0.76
HDAC6-233ENST00000489352 DOK4Q8TEW6 326 aa10.29□□□□□ -0.76
HDAC6-233ENST00000489352 ANKRD7Q92527 254 aa10.29□□□□□ -0.76
HDAC6-233ENST00000489352 GFM2Q969S9 779 aaKnown RBP10.29□□□□□ -0.76
HDAC6-233ENST00000489352 TRIM54Q9BYV2 358 aa10.29□□□□□ -0.76
HDAC6-233ENST00000489352 REXO4Q9GZR2 422 aaKnown RBP10.29□□□□□ -0.76
HDAC6-233ENST00000489352 HEATR1Q9H583 2144 aaKnown RBP10.29□□□□□ -0.76
HDAC6-233ENST00000489352 PELI2Q9HAT8 420 aa10.29□□□□□ -0.76
HDAC6-233ENST00000489352 DPRXA6NFQ7 191 aa10.28□□□□□ -0.76
HDAC6-233ENST00000489352 SEC14L5O43304 696 aa10.28□□□□□ -0.76
HDAC6-233ENST00000489352 LY6HO94772 140 aa10.28□□□□□ -0.76
HDAC6-233ENST00000489352 HNRNPH1P31943 449 aaKnown RBP10.28□□□□□ -0.76
HDAC6-233ENST00000489352 CETN2P41208 172 aa10.28□□□□□ -0.76
HDAC6-233ENST00000489352 FABP6P51161 128 aa10.28□□□□□ -0.76
HDAC6-233ENST00000489352 SLC37A1P57057 533 aa10.28□□□□□ -0.76
HDAC6-233ENST00000489352 COPS2P61201 443 aa10.28□□□□□ -0.76
HDAC6-233ENST00000489352 ZBED6P86452 979 aa10.28□□□□□ -0.76
HDAC6-233ENST00000489352 SP140Q13342 867 aa10.28□□□□□ -0.76
HDAC6-233ENST00000489352 SNTA1Q13424 505 aa10.28□□□□□ -0.76
HDAC6-233ENST00000489352 TAB1Q15750 504 aa10.28□□□□□ -0.76
HDAC6-233ENST00000489352 DEPDC1Q5TB30 811 aa10.28□□□□□ -0.76
HDAC6-233ENST00000489352 C11orf71Q6IPW1 123 aa10.28□□□□□ -0.76
HDAC6-233ENST00000489352 UGT2A3Q6UWM9 527 aa10.28□□□□□ -0.76
HDAC6-233ENST00000489352 ATG4DQ86TL0 474 aaPredicted RBP10.28□□□□□ -0.76
HDAC6-233ENST00000489352 CPNE9Q8IYJ1 553 aa10.28□□□□□ -0.76
HDAC6-233ENST00000489352 PIAS4Q8N2W9 510 aaPredicted RBP10.28□□□□□ -0.76
HDAC6-233ENST00000489352 PIWIL2Q8TC59 973 aaKnown RBP10.28□□□□□ -0.76
HDAC6-233ENST00000489352 RADILQ96JH8 1075 aa10.28□□□□□ -0.76
HDAC6-233ENST00000489352 FOXN4Q96NZ1 517 aa10.28□□□□□ -0.76
HDAC6-233ENST00000489352 AICDAQ9GZX7 198 aa10.28□□□□□ -0.76
HDAC6-233ENST00000489352 FOLH1BQ9HBA9 442 aa10.28□□□□□ -0.76
HDAC6-233ENST00000489352 GALNT9Q9HCQ5 603 aa10.28□□□□□ -0.76
HDAC6-233ENST00000489352 LYRM4Q9HD34 91 aa10.28□□□□□ -0.76
HDAC6-233ENST00000489352 ADAMTS6Q9UKP5 1117 aa10.28□□□□□ -0.76
HDAC6-233ENST00000489352 DHRS7Q9Y394 339 aa10.28□□□□□ -0.76
HDAC6-233ENST00000489352 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.28□□□□□ -0.76
HDAC6-233ENST00000489352 LOC390937A0A1W2PQ73 354 aa10.27□□□□□ -0.77
HDAC6-233ENST00000489352 CTAGE9A4FU28 777 aa10.27□□□□□ -0.77
HDAC6-233ENST00000489352 ANKDD1BA6NHY2 528 aa10.27□□□□□ -0.77
HDAC6-233ENST00000489352 SHISA9B4DS77 424 aa10.27□□□□□ -0.77
HDAC6-233ENST00000489352 C3orf80F5H4A9 247 aa10.27□□□□□ -0.77
HDAC6-233ENST00000489352 ABCD4O14678 606 aa10.27□□□□□ -0.77
HDAC6-233ENST00000489352 TJP3O95049 919 aa10.27□□□□□ -0.77
HDAC6-233ENST00000489352 ALOX15P16050 662 aaPredicted RBP10.27□□□□□ -0.77
HDAC6-233ENST00000489352 CPN2P22792 545 aa10.27□□□□□ -0.77
HDAC6-233ENST00000489352 GRIA1P42261 906 aa10.27□□□□□ -0.77
HDAC6-233ENST00000489352 RGS4P49798 205 aa10.27□□□□□ -0.77
HDAC6-233ENST00000489352 SESN2P58004 480 aaPredicted RBP10.27□□□□□ -0.77
HDAC6-233ENST00000489352 SASS6Q6UVJ0 657 aa10.27□□□□□ -0.77
HDAC6-233ENST00000489352 NXPE4Q6UWF7 544 aa10.27□□□□□ -0.77
HDAC6-233ENST00000489352 ZNF793Q6ZN11 406 aa10.27□□□□□ -0.77
HDAC6-233ENST00000489352 PLCZ1Q86YW0 608 aa10.27□□□□□ -0.77
HDAC6-233ENST00000489352 GIMAP7Q8NHV1 300 aa10.27□□□□□ -0.77
HDAC6-233ENST00000489352 RIT1Q92963 219 aa10.27□□□□□ -0.77
HDAC6-233ENST00000489352 GMPPAQ96IJ6 420 aaPredicted RBP10.27□□□□□ -0.77
HDAC6-233ENST00000489352 OR4K3Q96R72 315 aa10.27□□□□□ -0.77
HDAC6-233ENST00000489352 DHRS9Q9BPW9 319 aa10.27□□□□□ -0.77
HDAC6-233ENST00000489352 USB1Q9BQ65 265 aaKnown RBP10.27□□□□□ -0.77
HDAC6-233ENST00000489352 PELOQ9BRX2 385 aaKnown RBP10.27□□□□□ -0.77
HDAC6-233ENST00000489352 TRMOQ9BU70 441 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms