RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 PRR22Q8IZ63 422 aa22.98■■□□□ 1.27
HMGN1-217ENST00000489072 PHF10Q8WUB8 498 aaKnown RBP22.98■■□□□ 1.27
HMGN1-217ENST00000489072 NXF5Q9H1B4 397 aaKnown RBP22.98■■□□□ 1.27
HMGN1-217ENST00000489072 MKS1Q9NXB0 559 aa22.98■■□□□ 1.27
HMGN1-217ENST00000489072 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.98■■□□□ 1.27
HMGN1-217ENST00000489072 ENTPD4Q9Y227 616 aa22.98■■□□□ 1.27
HMGN1-217ENST00000489072 KLF2Q9Y5W3 355 aaPredicted RBP22.98■■□□□ 1.27
HMGN1-217ENST00000489072 V9GYY5 206 aaPredicted RBP22.98■■□□□ 1.27
HMGN1-217ENST00000489072 LRRC3CA6NJW4 275 aa22.97■■□□□ 1.27
HMGN1-217ENST00000489072 H3BQF6 201 aa22.97■■□□□ 1.27
HMGN1-217ENST00000489072 ANXA4P09525 319 aaPredicted RBP22.97■■□□□ 1.27
HMGN1-217ENST00000489072 RFPL3SP0C7P2 107 aa22.97■■□□□ 1.27
HMGN1-217ENST00000489072 PCSK2P16519 638 aa22.97■■□□□ 1.27
HMGN1-217ENST00000489072 SMSP52788 366 aa22.97■■□□□ 1.27
HMGN1-217ENST00000489072 KCNJ2P63252 427 aa22.97■■□□□ 1.27
HMGN1-217ENST00000489072 MRPS35P82673 323 aaKnown RBP22.97■■□□□ 1.27
HMGN1-217ENST00000489072 SPDYAQ5MJ70 313 aa22.97■■□□□ 1.27
HMGN1-217ENST00000489072 PAOXQ6QHF9 649 aa22.97■■□□□ 1.27
HMGN1-217ENST00000489072 TRILQ7L0X0 811 aa22.97■■□□□ 1.27
HMGN1-217ENST00000489072 TRIM46Q7Z4K8 759 aa22.97■■□□□ 1.27
HMGN1-217ENST00000489072 RIBC1Q8N443 379 aaPredicted RBP22.97■■□□□ 1.27
HMGN1-217ENST00000489072 BANPQ8N9N5 519 aa22.97■■□□□ 1.27
HMGN1-217ENST00000489072 C17orf47Q8NEP4 570 aa22.97■■□□□ 1.27
HMGN1-217ENST00000489072 EXOSC8Q96B26 276 aaKnown RBP22.97■■□□□ 1.27
HMGN1-217ENST00000489072 APOPT1Q96IL0 206 aa22.97■■□□□ 1.27
HMGN1-217ENST00000489072 ITPAQ9BY32 194 aa22.97■■□□□ 1.27
HMGN1-217ENST00000489072 BCAP29Q9UHQ4 241 aa22.97■■□□□ 1.27
HMGN1-217ENST00000489072 LGALS13Q9UHV8 139 aa22.97■■□□□ 1.27
HMGN1-217ENST00000489072 PLLPQ9Y342 182 aa22.97■■□□□ 1.27
HMGN1-217ENST00000489072 PHF3Q92576 2039 aaKnown RBP22.97■■□□□ 1.27
HMGN1-217ENST00000489072 ATP6AP2A0A1C7CYW4 349 aa22.96■■□□□ 1.27
HMGN1-217ENST00000489072 ZNF500O60304 480 aaPredicted RBP22.96■■□□□ 1.27
HMGN1-217ENST00000489072 ATP6AP2O75787 350 aa22.96■■□□□ 1.27
HMGN1-217ENST00000489072 SLU7O95391 586 aaKnown RBP22.96■■□□□ 1.27
HMGN1-217ENST00000489072 AGAP20933 346 aa22.96■■□□□ 1.27
HMGN1-217ENST00000489072 RPS6KA2Q15349 733 aa22.96■■□□□ 1.27
HMGN1-217ENST00000489072 NNATQ16517 81 aa22.96■■□□□ 1.27
HMGN1-217ENST00000489072 BICRALQ6AI39 1079 aa22.96■■□□□ 1.27
HMGN1-217ENST00000489072 WDR93Q6P2C0 686 aa22.96■■□□□ 1.27
HMGN1-217ENST00000489072 CCDC116Q8IYX3 515 aa22.96■■□□□ 1.27
HMGN1-217ENST00000489072 SLC34A3Q8N130 599 aa22.96■■□□□ 1.27
HMGN1-217ENST00000489072 MARVELD2Q8N4S9 558 aa22.96■■□□□ 1.27
HMGN1-217ENST00000489072 GATA5Q9BWX5 397 aaPredicted RBP22.96■■□□□ 1.27
HMGN1-217ENST00000489072 ZNF703Q9H7S9 590 aaPredicted RBP22.96■■□□□ 1.27
HMGN1-217ENST00000489072 ZFP64Q9NPA5 681 aa22.96■■□□□ 1.27
HMGN1-217ENST00000489072 PFDN4Q9NQP4 134 aa22.96■■□□□ 1.27
HMGN1-217ENST00000489072 ADGRG4Q8IZF6 3080 aa22.95■■□□□ 1.27
HMGN1-217ENST00000489072 A0A1B0GVC2 190 aa22.95■■□□□ 1.26
HMGN1-217ENST00000489072 NPIPA2E9PIF3 369 aa22.95■■□□□ 1.26
HMGN1-217ENST00000489072 NPIPA3F8WFD2 350 aa22.95■■□□□ 1.26
HMGN1-217ENST00000489072 CRCPO75575 148 aa22.95■■□□□ 1.26
HMGN1-217ENST00000489072 ABCD3P28288 659 aa22.95■■□□□ 1.26
HMGN1-217ENST00000489072 HTR1EP28566 365 aa22.95■■□□□ 1.26
HMGN1-217ENST00000489072 HEPACAMQ14CZ8 416 aa22.95■■□□□ 1.26
HMGN1-217ENST00000489072 IMPG1Q17R60 797 aa22.95■■□□□ 1.26
HMGN1-217ENST00000489072 PRSS53Q2L4Q9 553 aa22.95■■□□□ 1.26
HMGN1-217ENST00000489072 ZNF628Q5EBL2 1059 aa22.95■■□□□ 1.26
HMGN1-217ENST00000489072 CLEC6AQ6EIG7 209 aa22.95■■□□□ 1.26
HMGN1-217ENST00000489072 EMBQ6PCB8 327 aa22.95■■□□□ 1.26
HMGN1-217ENST00000489072 OR52R1Q8NGF1 315 aa22.95■■□□□ 1.26
HMGN1-217ENST00000489072 SPPL2AQ8TCT8 520 aa22.95■■□□□ 1.26
HMGN1-217ENST00000489072 ZNF675Q8TD23 568 aa22.95■■□□□ 1.26
HMGN1-217ENST00000489072 DIO2Q92813 273 aa22.95■■□□□ 1.26
HMGN1-217ENST00000489072 CAVIN3Q969G5 261 aa22.95■■□□□ 1.26
HMGN1-217ENST00000489072 SMC6Q96SB8 1091 aa22.95■■□□□ 1.26
HMGN1-217ENST00000489072 ANKRA2Q9H9E1 313 aa22.95■■□□□ 1.26
HMGN1-217ENST00000489072 MID2Q9UJV3 735 aa22.95■■□□□ 1.26
HMGN1-217ENST00000489072 BOKQ9UMX3 212 aaPredicted RBP22.95■■□□□ 1.26
HMGN1-217ENST00000489072 CCL27Q9Y4X3 112 aa22.95■■□□□ 1.26
HMGN1-217ENST00000489072 APCP25054 2843 aa22.95■■□□□ 1.26
HMGN1-217ENST00000489072 CAPN14A8MX76 684 aa22.94■■□□□ 1.26
HMGN1-217ENST00000489072 TP53I11O14683 189 aa22.94■■□□□ 1.26
HMGN1-217ENST00000489072 UROSP10746 265 aa22.94■■□□□ 1.26
HMGN1-217ENST00000489072 EMDP50402 254 aa22.94■■□□□ 1.26
HMGN1-217ENST00000489072 NRG3P56975 720 aa22.94■■□□□ 1.26
HMGN1-217ENST00000489072 IFFO1Q0D2I5 559 aa22.94■■□□□ 1.26
HMGN1-217ENST00000489072 ZNF763Q0D2J5 394 aa22.94■■□□□ 1.26
HMGN1-217ENST00000489072 SLC10A1Q14973 349 aa22.94■■□□□ 1.26
HMGN1-217ENST00000489072 ZNF630Q2M218 657 aaPredicted RBP22.94■■□□□ 1.26
HMGN1-217ENST00000489072 SRRM1Q8IYB3 904 aaKnown RBP22.94■■□□□ 1.26
HMGN1-217ENST00000489072 EID3Q8N140 333 aa22.94■■□□□ 1.26
HMGN1-217ENST00000489072 RPRMLQ8N4K4 120 aa22.94■■□□□ 1.26
HMGN1-217ENST00000489072 OR9A2Q8NGT5 310 aa22.94■■□□□ 1.26
HMGN1-217ENST00000489072 PUM2Q8TB72 1066 aaKnown RBP eCLIP22.94■■□□□ 1.26
HMGN1-217ENST00000489072 KAT2AQ92830 837 aa22.94■■□□□ 1.26
HMGN1-217ENST00000489072 DOHHQ9BU89 302 aa22.94■■□□□ 1.26
HMGN1-217ENST00000489072 TP63Q9H3D4 680 aaPredicted RBP22.94■■□□□ 1.26
HMGN1-217ENST00000489072 SLC35C2Q9NQQ7 365 aa22.94■■□□□ 1.26
HMGN1-217ENST00000489072 PNPLA3Q9NST1 481 aa22.94■■□□□ 1.26
HMGN1-217ENST00000489072 SLC17A7Q9P2U7 560 aa22.94■■□□□ 1.26
HMGN1-217ENST00000489072 TNFRSF10DQ9UBN6 386 aa22.94■■□□□ 1.26
HMGN1-217ENST00000489072 CFL2Q9Y281 166 aa22.94■■□□□ 1.26
HMGN1-217ENST00000489072 POLR3HQ9Y535 204 aaPredicted RBP22.94■■□□□ 1.26
HMGN1-217ENST00000489072 PTGDR2Q9Y5Y4 395 aa22.94■■□□□ 1.26
HMGN1-217ENST00000489072 ANKRD33BA6NCL7 494 aa22.93■■□□□ 1.26
HMGN1-217ENST00000489072 TRIM13O60858 407 aa22.93■■□□□ 1.26
HMGN1-217ENST00000489072 TRIM3O75382 744 aaPredicted RBP22.93■■□□□ 1.26
HMGN1-217ENST00000489072 RSL1D1O76021 490 aaKnown RBP22.93■■□□□ 1.26
HMGN1-217ENST00000489072 GSTM5P46439 218 aa22.93■■□□□ 1.26
HMGN1-217ENST00000489072 TMED10P49755 219 aaKnown RBP22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms