RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 TMEM129A0AVI4 362 aa2.56□□□□□ -2
RFC4-213ENST00000489028 FAM220BPB1ANY3 271 aa2.56□□□□□ -2
RFC4-213ENST00000489028 E7ENQ6 273 aa2.56□□□□□ -2
RFC4-213ENST00000489028 CDX4O14627 284 aaPredicted RBP2.56□□□□□ -2
RFC4-213ENST00000489028 PRPSAP2O60256 369 aa2.56□□□□□ -2
RFC4-213ENST00000489028 HSF2BPO75031 334 aa2.56□□□□□ -2
RFC4-213ENST00000489028 STAM2O75886 525 aa2.56□□□□□ -2
RFC4-213ENST00000489028 CCDC192P0DO97 292 aa2.56□□□□□ -2
RFC4-213ENST00000489028 HSD17B1P14061 328 aa2.56□□□□□ -2
RFC4-213ENST00000489028 CPA3P15088 417 aa2.56□□□□□ -2
RFC4-213ENST00000489028 FERP16591 822 aa2.56□□□□□ -2
RFC4-213ENST00000489028 ZBTB25P24278 435 aa2.56□□□□□ -2
RFC4-213ENST00000489028 PPP2R1BP30154 601 aa2.56□□□□□ -2
RFC4-213ENST00000489028 DRD3P35462 400 aa2.56□□□□□ -2
RFC4-213ENST00000489028 CASP9P55211 416 aa2.56□□□□□ -2
RFC4-213ENST00000489028 UCP2P55851 309 aa2.56□□□□□ -2
RFC4-213ENST00000489028 YBEYP58557 167 aaPredicted RBP2.56□□□□□ -2
RFC4-213ENST00000489028 GFPT1Q06210 699 aaPredicted RBP2.56□□□□□ -2
RFC4-213ENST00000489028 MSLNQ13421 630 aaPredicted RBP2.56□□□□□ -2
RFC4-213ENST00000489028 TSTA3Q13630 321 aaPredicted RBP2.56□□□□□ -2
RFC4-213ENST00000489028 GIT2Q14161 759 aa2.56□□□□□ -2
RFC4-213ENST00000489028 GSG1Q2KHT4 349 aa2.56□□□□□ -2
RFC4-213ENST00000489028 EPC2Q52LR7 807 aa2.56□□□□□ -2
RFC4-213ENST00000489028 ACER2Q5QJU3 275 aa2.56□□□□□ -2
RFC4-213ENST00000489028 C9orf129Q5T035 196 aaKnown RBP2.56□□□□□ -2
RFC4-213ENST00000489028 GCNT7Q6ZNI0 430 aa2.56□□□□□ -2
RFC4-213ENST00000489028 VASH2Q86V25 355 aa2.56□□□□□ -2
RFC4-213ENST00000489028 ZNF410Q86VK4 478 aa2.56□□□□□ -2
RFC4-213ENST00000489028 TEX9Q8N6V9 391 aa2.56□□□□□ -2
RFC4-213ENST00000489028 MRPL43Q8N983 215 aaKnown RBP2.56□□□□□ -2
RFC4-213ENST00000489028 OR4L1Q8NH43 312 aa2.56□□□□□ -2
RFC4-213ENST00000489028 SLC13A3Q8WWT9 602 aa2.56□□□□□ -2
RFC4-213ENST00000489028 CRYGNQ8WXF5 182 aa2.56□□□□□ -2
RFC4-213ENST00000489028 PIWIL1Q96J94 861 aaKnown RBP2.56□□□□□ -2
RFC4-213ENST00000489028 GUCD1Q96NT3 240 aa2.56□□□□□ -2
RFC4-213ENST00000489028 FAM213AQ9BRX8 229 aa2.56□□□□□ -2
RFC4-213ENST00000489028 IKZF5Q9H5V7 419 aa2.56□□□□□ -2
RFC4-213ENST00000489028 MAGEF1Q9HAY2 307 aa2.56□□□□□ -2
RFC4-213ENST00000489028 FETUBQ9UGM5 382 aa2.56□□□□□ -2
RFC4-213ENST00000489028 MOKQ9UQ07 419 aa2.56□□□□□ -2
RFC4-213ENST00000489028 MTF2Q9Y483 593 aaPredicted RBP2.56□□□□□ -2
RFC4-213ENST00000489028 C5orf51A6NDU8 294 aa2.55□□□□□ -2
RFC4-213ENST00000489028 SLC15A5A6NIM6 579 aa2.55□□□□□ -2
RFC4-213ENST00000489028 MEI4A8MW99 385 aa2.55□□□□□ -2
RFC4-213ENST00000489028 TXNDC12O95881 172 aa2.55□□□□□ -2
RFC4-213ENST00000489028 GAS8O95995 478 aa2.55□□□□□ -2
RFC4-213ENST00000489028 IGHV3-9P01782 118 aa2.55□□□□□ -2
RFC4-213ENST00000489028 ALPPP05187 535 aa2.55□□□□□ -2
RFC4-213ENST00000489028 ABHD2P08910 425 aa2.55□□□□□ -2
RFC4-213ENST00000489028 TPBGLP0DKB5 382 aa2.55□□□□□ -2
RFC4-213ENST00000489028 CT45A8P0DMV1 189 aa2.55□□□□□ -2
RFC4-213ENST00000489028 CT45A9P0DMV2 189 aa2.55□□□□□ -2
RFC4-213ENST00000489028 ALPPL2P10696 532 aa2.55□□□□□ -2
RFC4-213ENST00000489028 DESP17661 470 aa2.55□□□□□ -2
RFC4-213ENST00000489028 ARF4P18085 180 aaPredicted RBP2.55□□□□□ -2
RFC4-213ENST00000489028 TRIM23P36406 574 aa2.55□□□□□ -2
RFC4-213ENST00000489028 SLC25A1P53007 311 aa2.55□□□□□ -2
RFC4-213ENST00000489028 MFAP2P55001 183 aa2.55□□□□□ -2
RFC4-213ENST00000489028 HSPA14Q0VDF9 509 aa2.55□□□□□ -2
RFC4-213ENST00000489028 CNPY1Q3B7I2 92 aa2.55□□□□□ -2
RFC4-213ENST00000489028 CT45A2Q5DJT8 189 aa2.55□□□□□ -2
RFC4-213ENST00000489028 SEL1L2Q5TEA6 688 aa2.55□□□□□ -2
RFC4-213ENST00000489028 C1orf189Q5VU69 101 aa2.55□□□□□ -2
RFC4-213ENST00000489028 RHBDD2Q6NTF9 364 aa2.55□□□□□ -2
RFC4-213ENST00000489028 FGD5Q6ZNL6 1462 aa2.55□□□□□ -2
RFC4-213ENST00000489028 FAM205AQ6ZU69 1335 aa2.55□□□□□ -2
RFC4-213ENST00000489028 PRSS48Q7RTY5 328 aa2.55□□□□□ -2
RFC4-213ENST00000489028 TMEM126BQ8IUX1 230 aa2.55□□□□□ -2
RFC4-213ENST00000489028 BATF2Q8N1L9 274 aa2.55□□□□□ -2
RFC4-213ENST00000489028 NEK11Q8NG66 645 aa2.55□□□□□ -2
RFC4-213ENST00000489028 URGCPQ8TCY9 931 aa2.55□□□□□ -2
RFC4-213ENST00000489028 VN1R17PQ8TDU5 208 aa2.55□□□□□ -2
RFC4-213ENST00000489028 UBTD2Q8WUN7 234 aa2.55□□□□□ -2
RFC4-213ENST00000489028 TAF4BQ92750 862 aa2.55□□□□□ -2
RFC4-213ENST00000489028 HAS2Q92819 552 aa2.55□□□□□ -2
RFC4-213ENST00000489028 MRPL53Q96EL3 112 aaKnown RBP2.55□□□□□ -2
RFC4-213ENST00000489028 PHYHIPLQ96FC7 376 aa2.55□□□□□ -2
RFC4-213ENST00000489028 CXorf58Q96LI9 332 aa2.55□□□□□ -2
RFC4-213ENST00000489028 CCT8L2Q96SF2 557 aa2.55□□□□□ -2
RFC4-213ENST00000489028 TEX13AQ9BXU3 409 aaPredicted RBP2.55□□□□□ -2
RFC4-213ENST00000489028 KRTAP4-3Q9BYR4 195 aa2.55□□□□□ -2
RFC4-213ENST00000489028 KRT23Q9C075 422 aa2.55□□□□□ -2
RFC4-213ENST00000489028 XPO4Q9C0E2 1151 aaKnown RBP2.55□□□□□ -2
RFC4-213ENST00000489028 TSPYL1Q9H0U9 437 aa2.55□□□□□ -2
RFC4-213ENST00000489028 RNF41Q9H4P4 317 aaPredicted RBP2.55□□□□□ -2
RFC4-213ENST00000489028 ELL3Q9HB65 397 aaPredicted RBP2.55□□□□□ -2
RFC4-213ENST00000489028 PDFQ9HBH1 243 aa2.55□□□□□ -2
RFC4-213ENST00000489028 SEC14L4Q9UDX3 406 aa2.55□□□□□ -2
RFC4-213ENST00000489028 TRIM10Q9UDY6 481 aa2.55□□□□□ -2
RFC4-213ENST00000489028 TRMT6Q9UJA5 497 aaKnown RBP2.55□□□□□ -2
RFC4-213ENST00000489028 CCPG1Q9ULG6 757 aa2.55□□□□□ -2
RFC4-213ENST00000489028 EXOC7Q9UPT5 735 aa2.55□□□□□ -2
RFC4-213ENST00000489028 PIN4Q9Y237 131 aaKnown RBP2.55□□□□□ -2
RFC4-213ENST00000489028 KCNK6Q9Y257 313 aa2.55□□□□□ -2
RFC4-213ENST00000489028 FOXA2Q9Y261 457 aaPredicted RBP2.55□□□□□ -2
RFC4-213ENST00000489028 RPH3AQ9Y2J0 694 aaPredicted RBP2.55□□□□□ -2
RFC4-213ENST00000489028 STRAPQ9Y3F4 350 aaKnown RBP2.55□□□□□ -2
RFC4-213ENST00000489028 K7ERI5 159 aa2.54□□□□□ -2
RFC4-213ENST00000489028 RTL8CO15255 209 aa2.54□□□□□ -2
RFC4-213ENST00000489028 TSPAN2O60636 221 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms