RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 THBS1P07996 1170 aa9.58□□□□□ -0.88
SKA1-204ENST00000488454 ABCB1P08183 1280 aaPredicted RBP9.58□□□□□ -0.88
SKA1-204ENST00000488454 EFNA1P20827 205 aaPredicted RBP9.58□□□□□ -0.88
SKA1-204ENST00000488454 FRKP42685 505 aaPredicted RBP9.58□□□□□ -0.88
SKA1-204ENST00000488454 PRR5P85299 388 aa9.58□□□□□ -0.88
SKA1-204ENST00000488454 DUSP2Q05923 314 aa9.58□□□□□ -0.88
SKA1-204ENST00000488454 CHAF1BQ13112 559 aa9.58□□□□□ -0.88
SKA1-204ENST00000488454 MAPRE2Q15555 327 aa9.58□□□□□ -0.88
SKA1-204ENST00000488454 LTB4RQ15722 352 aa9.58□□□□□ -0.88
SKA1-204ENST00000488454 MAPKAPK3Q16644 382 aa9.58□□□□□ -0.88
SKA1-204ENST00000488454 MPEG1Q2M385 716 aa9.58□□□□□ -0.88
SKA1-204ENST00000488454 SPDYE7PQ495Y7 208 aa9.58□□□□□ -0.88
SKA1-204ENST00000488454 TRMT12Q53H54 448 aaKnown RBP9.58□□□□□ -0.88
SKA1-204ENST00000488454 ZNF628Q5EBL2 1059 aa9.58□□□□□ -0.88
SKA1-204ENST00000488454 HLA-DQA1Q5Y7H0 255 aa9.58□□□□□ -0.88
SKA1-204ENST00000488454 BHLHB9Q6PI77 547 aa9.58□□□□□ -0.88
SKA1-204ENST00000488454 C19orf48Q6RUI8 117 aa9.58□□□□□ -0.88
SKA1-204ENST00000488454 TMEM107Q6UX40 140 aa9.58□□□□□ -0.88
SKA1-204ENST00000488454 RNF111Q6ZNA4 994 aa9.58□□□□□ -0.88
SKA1-204ENST00000488454 DGAT2L6Q6ZPD8 337 aa9.58□□□□□ -0.88
SKA1-204ENST00000488454 SLC29A4Q7RTT9 530 aa9.58□□□□□ -0.88
SKA1-204ENST00000488454 MTDHQ86UE4 582 aaKnown RBP9.58□□□□□ -0.88
SKA1-204ENST00000488454 GALNT16Q8N428 558 aa9.58□□□□□ -0.88
SKA1-204ENST00000488454 SLC5A8Q8N695 610 aa9.58□□□□□ -0.88
SKA1-204ENST00000488454 CCDC197Q8NCU1 140 aa9.58□□□□□ -0.88
SKA1-204ENST00000488454 OR9I1Q8NGQ6 314 aa9.58□□□□□ -0.88
SKA1-204ENST00000488454 SUN3Q8TAQ9 357 aa9.58□□□□□ -0.88
SKA1-204ENST00000488454 BCAS4Q8TDM0 211 aa9.58□□□□□ -0.88
SKA1-204ENST00000488454 SNRNP27Q8WVK2 155 aaKnown RBP9.58□□□□□ -0.88
SKA1-204ENST00000488454 SPDL1Q96EA4 605 aa9.58□□□□□ -0.88
SKA1-204ENST00000488454 ELP4Q96EB1 424 aa9.58□□□□□ -0.88
SKA1-204ENST00000488454 ITCHQ96J02 903 aa9.58□□□□□ -0.88
SKA1-204ENST00000488454 NEUROD4Q9HD90 331 aa9.58□□□□□ -0.88
SKA1-204ENST00000488454 SAR1AQ9NR31 198 aa9.58□□□□□ -0.88
SKA1-204ENST00000488454 DDX18Q9NVP1 670 aaKnown RBP9.58□□□□□ -0.88
SKA1-204ENST00000488454 MAT2BQ9NZL9 334 aa9.58□□□□□ -0.88
SKA1-204ENST00000488454 PTGFRNQ9P2B2 879 aa9.58□□□□□ -0.88
SKA1-204ENST00000488454 PRODH2Q9UF12 536 aa9.58□□□□□ -0.88
SKA1-204ENST00000488454 TEKT2Q9UIF3 430 aa9.58□□□□□ -0.88
SKA1-204ENST00000488454 PPIEQ9UNP9 301 aaKnown RBP9.58□□□□□ -0.88
SKA1-204ENST00000488454 ASPMQ8IZT6 3477 aa9.58□□□□□ -0.88
SKA1-204ENST00000488454 A0A087WV62 115 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 OR6C76A6NM76 312 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 MASP2O00187 686 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 PLOD2O00469 737 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 FCHO1O14526 889 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 RFXANKO14593 260 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 SLC22A2O15244 555 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 EMC8O43402 210 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 PLOD3O60568 738 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 PRAMEF2O60811 474 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 COQ9O75208 318 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 DCTN3O75935 186 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 ANP32DO95626 131 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 ALPPP05187 535 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 SNRPB2P08579 225 aaKnown RBP9.57□□□□□ -0.88
SKA1-204ENST00000488454 CT62P0C5K7 136 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 SSTR4P31391 388 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 PTGER1P34995 402 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 MC3RP41968 323 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 GPR143P51810 404 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 PRKAG1P54619 331 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 WNT3P56703 355 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 MRPS35P82673 323 aaKnown RBP9.57□□□□□ -0.88
SKA1-204ENST00000488454 MGAT2Q10469 447 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 FUT7Q11130 342 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 UBAP2LQ14157 1087 aaKnown RBP9.57□□□□□ -0.88
SKA1-204ENST00000488454 TBR1Q16650 682 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 VPS26BQ4G0F5 336 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 TIGD2Q4W5G0 525 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 AGAP7PQ5VUJ5 663 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 MSANTD1Q6ZTZ1 278 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 SZRD1Q7Z422 152 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 ANKRD46Q86W74 232 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 FUNDC1Q8IVP5 155 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 TRIML2Q8N7C3 387 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 OR52R1Q8NGF1 315 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 OR8K3Q8NH51 312 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 ELP5Q8TE02 316 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 ZNF721Q8TF20 911 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 TSPEARQ8WU66 669 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 GTPBP3Q969Y2 492 aaKnown RBP9.57□□□□□ -0.88
SKA1-204ENST00000488454 VPS33AQ96AX1 596 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 MOAP1Q96BY2 351 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 CTHRC1Q96CG8 243 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 AGAP4Q96P64 663 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 LRRC37BQ96QE4 947 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 PANX1Q96RD7 426 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 NUDT9Q9BW91 350 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 SEMA4CQ9C0C4 833 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 NMUR2Q9GZQ4 415 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 OR10A5Q9H207 317 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 ZNF385DQ9H6B1 395 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 SLAMF7Q9NQ25 335 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 TAS2R9Q9NYW1 312 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 BTNL2Q9UIR0 455 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 NDUFAF1Q9Y375 327 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 CAPN7Q9Y6W3 813 aa9.57□□□□□ -0.88
SKA1-204ENST00000488454 C2orf92A0A1B0GVN3 265 aa9.56□□□□□ -0.88
SKA1-204ENST00000488454 A0A1W2PP18 115 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms