RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 ZFP28Q8NHY6 868 aa10.24□□□□□ -0.77
UBE4B-210ENST00000488228 TESCQ96BS2 214 aa10.24□□□□□ -0.77
UBE4B-210ENST00000488228 ZBED6CLQ96FA7 236 aaPredicted RBP10.24□□□□□ -0.77
UBE4B-210ENST00000488228 ZNF354BQ96LW1 612 aa10.24□□□□□ -0.77
UBE4B-210ENST00000488228 SIKE1Q9BRV8 207 aa10.24□□□□□ -0.77
UBE4B-210ENST00000488228 SDR39U1Q9NRG7 319 aaPredicted RBP10.24□□□□□ -0.77
UBE4B-210ENST00000488228 ATAD3AQ9NVI7 634 aa10.24□□□□□ -0.77
UBE4B-210ENST00000488228 DDX18Q9NVP1 670 aaKnown RBP10.24□□□□□ -0.77
UBE4B-210ENST00000488228 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.24□□□□□ -0.77
UBE4B-210ENST00000488228 ZNF639Q9UID6 485 aa10.24□□□□□ -0.77
UBE4B-210ENST00000488228 NCKAP5O14513 1909 aa10.23□□□□□ -0.77
UBE4B-210ENST00000488228 OR6C76A6NM76 312 aa10.23□□□□□ -0.77
UBE4B-210ENST00000488228 FCHO1O14526 889 aa10.23□□□□□ -0.77
UBE4B-210ENST00000488228 DPM1O60762 260 aa10.23□□□□□ -0.77
UBE4B-210ENST00000488228 DDX5P17844 614 aaKnown RBP10.23□□□□□ -0.77
UBE4B-210ENST00000488228 LSP1P33241 339 aa10.23□□□□□ -0.77
UBE4B-210ENST00000488228 SOAT1P35610 550 aa10.23□□□□□ -0.77
UBE4B-210ENST00000488228 SOX3P41225 446 aa10.23□□□□□ -0.77
UBE4B-210ENST00000488228 ZFP36L2P47974 494 aaKnown RBP10.23□□□□□ -0.77
UBE4B-210ENST00000488228 EMDP50402 254 aa10.23□□□□□ -0.77
UBE4B-210ENST00000488228 DGKQP52824 942 aa10.23□□□□□ -0.77
UBE4B-210ENST00000488228 SEC24CP53992 1094 aa10.23□□□□□ -0.77
UBE4B-210ENST00000488228 MANFP55145 182 aaKnown RBP10.23□□□□□ -0.77
UBE4B-210ENST00000488228 WNT3P56703 355 aa10.23□□□□□ -0.77
UBE4B-210ENST00000488228 STX1BP61266 288 aa10.23□□□□□ -0.77
UBE4B-210ENST00000488228 GNGT1P63211 74 aa10.23□□□□□ -0.77
UBE4B-210ENST00000488228 PHC1P78364 1004 aa10.23□□□□□ -0.77
UBE4B-210ENST00000488228 TUBA3CQ13748 450 aa10.23□□□□□ -0.77
UBE4B-210ENST00000488228 RPS6KA2Q15349 733 aa10.23□□□□□ -0.77
UBE4B-210ENST00000488228 GSTA3Q16772 222 aa10.23□□□□□ -0.77
UBE4B-210ENST00000488228 TIGD2Q4W5G0 525 aa10.23□□□□□ -0.77
UBE4B-210ENST00000488228 SLC6A19Q695T7 634 aa10.23□□□□□ -0.77
UBE4B-210ENST00000488228 TUBA3EQ6PEY2 450 aa10.23□□□□□ -0.77
UBE4B-210ENST00000488228 PAOXQ6QHF9 649 aa10.23□□□□□ -0.77
UBE4B-210ENST00000488228 IGFL3Q6UXB1 125 aa10.23□□□□□ -0.77
UBE4B-210ENST00000488228 TMEM64Q6YI46 380 aa10.23□□□□□ -0.77
UBE4B-210ENST00000488228 WDR53Q7Z5U6 358 aaPredicted RBP10.23□□□□□ -0.77
UBE4B-210ENST00000488228 ARMC10Q8N2F6 343 aa10.23□□□□□ -0.77
UBE4B-210ENST00000488228 MIER2Q8N344 545 aa10.23□□□□□ -0.77
UBE4B-210ENST00000488228 ZNF441Q8N8Z8 693 aa10.23□□□□□ -0.77
UBE4B-210ENST00000488228 CATSPER1Q8NEC5 780 aa10.23□□□□□ -0.77
UBE4B-210ENST00000488228 OR8K3Q8NH51 312 aa10.23□□□□□ -0.77
UBE4B-210ENST00000488228 NUBPLQ8TB37 319 aa10.23□□□□□ -0.77
UBE4B-210ENST00000488228 FBXO30Q8TB52 745 aa10.23□□□□□ -0.77
UBE4B-210ENST00000488228 TM9SF4Q92544 642 aa10.23□□□□□ -0.77
UBE4B-210ENST00000488228 COQ8BQ96D53 544 aa10.23□□□□□ -0.77
UBE4B-210ENST00000488228 RILPQ96NA2 401 aa10.23□□□□□ -0.77
UBE4B-210ENST00000488228 RASL10BQ96S79 203 aa10.23□□□□□ -0.77
UBE4B-210ENST00000488228 ZBTB18Q99592 522 aa10.23□□□□□ -0.77
UBE4B-210ENST00000488228 PRPF18Q99633 342 aaKnown RBP10.23□□□□□ -0.77
UBE4B-210ENST00000488228 BHLHE41Q9C0J9 482 aaPredicted RBP10.23□□□□□ -0.77
UBE4B-210ENST00000488228 FAM107BQ9H098 131 aa10.23□□□□□ -0.77
UBE4B-210ENST00000488228 EQTNQ9NQ60 294 aa10.23□□□□□ -0.77
UBE4B-210ENST00000488228 SIRT3Q9NTG7 399 aaPredicted RBP10.23□□□□□ -0.77
UBE4B-210ENST00000488228 ACSS1Q9NUB1 689 aaPredicted RBP10.23□□□□□ -0.77
UBE4B-210ENST00000488228 STMN3Q9NZ72 180 aa10.23□□□□□ -0.77
UBE4B-210ENST00000488228 ABI3Q9P2A4 366 aa10.23□□□□□ -0.77
UBE4B-210ENST00000488228 MYOTQ9UBF9 498 aa10.23□□□□□ -0.77
UBE4B-210ENST00000488228 PCDHGB7Q9Y5F8 929 aa10.23□□□□□ -0.77
UBE4B-210ENST00000488228 HEMK1Q9Y5R4 338 aaPredicted RBP10.23□□□□□ -0.77
UBE4B-210ENST00000488228 COPG1Q9Y678 874 aaKnown RBP10.23□□□□□ -0.77
UBE4B-210ENST00000488228 SHANK1Q9Y566 2161 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 SVILO95425 2214 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 NBASA2RRP1 2371 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 A0A087WV62 115 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 C2orf92A0A1B0GVN3 265 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 A0A1W2PRB8 838 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 DYTNA2CJ06 578 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 OR5H15A6NDH6 313 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 UPK1AO00322 258 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 CFLARO15519 480 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 PLOD3O60568 738 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 C1QL1O75973 258 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 SLITRK5O94991 958 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 OR6B1O95007 311 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 PSMG1O95456 288 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 NADKO95544 446 aaPredicted RBP10.22□□□□□ -0.77
UBE4B-210ENST00000488228 SFTPCP11686 197 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 S100A3P33764 101 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 TNFSF10P50591 281 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 SSR4P51571 173 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 NR0B1P51843 470 aaKnown RBP10.22□□□□□ -0.77
UBE4B-210ENST00000488228 CORO7P57737 925 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 OC90Q02509 493 aaPredicted RBP10.22□□□□□ -0.77
UBE4B-210ENST00000488228 GAB1Q13480 694 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 OR1C1Q15619 314 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 DPY19L1Q2PZI1 675 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 HLA-DQA1Q5Y7H0 255 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 NPSR1Q6W5P4 371 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 DNAJC14Q6Y2X3 702 aaPredicted RBP10.22□□□□□ -0.77
UBE4B-210ENST00000488228 PRR22Q8IZ63 422 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 CLEC4FQ8N1N0 589 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 OR2L13Q8N349 312 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 ZADH2Q8N4Q0 377 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 OR8J2Q8NGG1 315 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 OR5L2Q8NGL0 311 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 OR4A15Q8NGL6 344 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 OR5AK3PQ8NH89 298 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 STON2Q8WXE9 905 aa10.22□□□□□ -0.77
UBE4B-210ENST00000488228 ASB15Q8WXK1 588 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms