RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 GPX2P18283 190 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 IL1RNP18510 177 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 DDCP20711 480 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 ZNF10P21506 573 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-216ENST00000484087 LORP23490 312 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-216ENST00000484087 TPP2P29144 1249 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-216ENST00000484087 RORAP35398 523 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 CHI3L1P36222 383 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-216ENST00000484087 ALDH9A1P49189 494 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 ITGA1P56199 1179 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 VSX2P58304 361 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-216ENST00000484087 FOLH1Q04609 750 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 NFATC3Q12968 1075 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 FADDQ13158 208 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 PDE7AQ13946 482 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 ATP6AP1Q15904 470 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 SLC5A12Q1EHB4 618 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 VMACQ2NL98 169 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 INTS11Q5TA45 600 aaKnown RBP6.52□□□□□ -1.37
BRCA1-216ENST00000484087 OR4C11Q6IEV9 310 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 AMIGO2Q86SJ2 522 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 KMT5CQ86Y97 462 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 TICAM1Q8IUC6 712 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 OR4N4Q8N0Y3 316 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 ZNF843Q8N446 348 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 GALNT4Q8N4A0 578 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 DNAJC22Q8N4W6 341 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 ESX1Q8N693 406 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 MFSD9Q8NBP5 474 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 GOT1L1Q8NHS2 421 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-216ENST00000484087 FBXO30Q8TB52 745 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.52□□□□□ -1.37
BRCA1-216ENST00000484087 SNRNP27Q8WVK2 155 aaKnown RBP6.52□□□□□ -1.37
BRCA1-216ENST00000484087 N4BP2L2Q92802 583 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-216ENST00000484087 KIAA1143Q96AT1 154 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-216ENST00000484087 SLC47A1Q96FL8 570 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 AURKBQ96GD4 344 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-216ENST00000484087 KCNC2Q96PR1 638 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 MACROD1Q9BQ69 325 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 ZPBPQ9BS86 351 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 NLNQ9BYT8 704 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 TRIM4Q9C037 500 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 SLC7A5P2Q9GIP4 190 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 ROGDIQ9GZN7 287 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 MAGIXQ9H6Y5 334 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 FANCEQ9HB96 536 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 NEUROD4Q9HD90 331 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 ZNF71Q9NQZ8 489 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-216ENST00000484087 AGPAT4Q9NRZ5 378 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 OLAHQ9NV23 265 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 TAS2R9Q9NYW1 312 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 SCOCQ9UIL1 159 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 BAG5Q9UL15 447 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 MAU2Q9Y6X3 613 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 V9GYQ6 96 aa6.52□□□□□ -1.37
BRCA1-216ENST00000484087 ZNF891A8MT65 544 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-216ENST00000484087 MEN1O00255 615 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 RTCAO00442 366 aaKnown RBP6.51□□□□□ -1.37
BRCA1-216ENST00000484087 HAT1O14929 419 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 CLOCKO15516 846 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 PDPK1O15530 556 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 ZSCAN9O15535 394 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-216ENST00000484087 P2RX6O15547 441 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 ERI3O43414 337 aaKnown RBP6.51□□□□□ -1.37
BRCA1-216ENST00000484087 DENRO43583 198 aaKnown RBP6.51□□□□□ -1.37
BRCA1-216ENST00000484087 LCMT2O60294 686 aaKnown RBP6.51□□□□□ -1.37
BRCA1-216ENST00000484087 ZIC2O95409 532 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-216ENST00000484087 C6orf47O95873 294 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 SERPINA1P01009 418 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 FAM58BPP0C7Q3 252 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 HOXB9P17482 250 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-216ENST00000484087 UQCRC2P22695 453 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 PTPN6P29350 595 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 NTSP30990 170 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 SOAT1P35610 550 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 BSGP35613 385 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 BCL6P41182 706 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 CRATP43155 626 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 PRIM2P49643 509 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 PLA2G16P53816 162 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 MANFP55145 182 aaKnown RBP6.51□□□□□ -1.37
BRCA1-216ENST00000484087 RBBP4Q09028 425 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 RAPSNQ13702 412 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 VEZF1Q14119 521 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 TOR1AIP1Q5JTV8 583 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 ZNF385CQ66K41 422 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-216ENST00000484087 ZNF425Q6IV72 752 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 FIGLAQ6QHK4 219 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 ASPGQ86U10 573 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 PAQR7Q86WK9 346 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 SLC30A8Q8IWU4 369 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 FAM47BQ8NA70 645 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 ZSCAN1Q8NBB4 408 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 C11orf65Q8NCR3 313 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 OR2L5Q8NG80 312 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 OR52N2Q8NGI0 321 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 ZFP28Q8NHY6 868 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 CREB3L4Q8TEY5 395 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 ZFP90Q8TF47 636 aa6.51□□□□□ -1.37
BRCA1-216ENST00000484087 OR5P2Q8WZ92 322 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms