RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 THSD1Q9NS62 852 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 SEMA3GQ9NS98 782 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 ACER3Q9NUN7 267 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 PCDHGB3Q9Y5G1 929 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 SEC16AO15027 2179 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 CACNA1EQ15878 2313 aa8.3□□□□□ -1.08
CDC42SE1-204ENST00000483763 IGHV5-51A0A0C4DH38 117 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 BCAT2O15382 392 aaPredicted RBP8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 PIAS2O75928 621 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 TPPPO94811 219 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 NR2F1P10589 423 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 AGXTP21549 392 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 CLK3P49761 638 aaKnown RBP8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 CD47Q08722 323 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 RAPSNQ13702 412 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 LPAL2Q16609 132 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 TCTN3Q6NUS6 607 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 ARMC6Q6NXE6 501 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 FAHD1Q6P587 224 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 Q6ZPB1 254 aaPredicted RBP8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 ZNF605Q86T29 641 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 CCDC71Q8IV32 467 aaPredicted RBP8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 MCATQ8IVS2 390 aaKnown RBP8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 SLC5A8Q8N695 610 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 SLC16A11Q8NCK7 471 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 NUP43Q8NFH3 380 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 ZFP28Q8NHY6 868 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 GEMIN6Q8WXD5 167 aaKnown RBP8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 DHRS1Q96LJ7 313 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 EPYCQ99645 322 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 NIPSNAP1Q9BPW8 284 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 CCDC3Q9BQI4 270 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 TMEM165Q9HC07 324 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 P2RX2Q9UBL9 471 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 KMT2EQ8IZD2 1858 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 CEP192Q8TEP8 1941 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 A0A1B0GVT2 93 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 URADA6NGE7 173 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 TNFRSF11BO00300 401 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 SLC16A6O15403 523 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 FCMRO60667 390 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 RDH16O75452 317 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 JRKO75564 520 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 PROS1P07225 676 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 GIMD1P0DJR0 217 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 ALDH4A1P30038 563 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 ARHGDIAP52565 204 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 HNRNPKP61978 463 aaKnown RBP eCLIP8.29□□□□□ -1.083e-7■■□□□ 12.8
CDC42SE1-204ENST00000483763 EXOC3L2Q2M3D2 409 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 KCTD21Q4G0X4 260 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 TTC23Q5W5X9 447 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 LAIR1Q6GTX8 287 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 OGFOD3Q6PK18 319 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 THAP5Q7Z6K1 395 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 ANKRD13BQ86YJ7 626 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 MAML2Q8IZL2 1156 aaPredicted RBP8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 CA13Q8N1Q1 262 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 LRRC25Q8N386 305 aaPredicted RBP8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 DNAJC22Q8N4W6 341 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 ATG16L2Q8NAA4 619 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 OR4K14Q8NGD5 310 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 OR9Q2Q8NGE9 314 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 NRBF2Q96F24 287 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 TGM7Q96PF1 710 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 OR7D2Q96RA2 312 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 RBCK1Q9BYM8 510 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 RIBC2Q9H4K1 309 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 KLHL3Q9UH77 587 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 PHF11Q9UIL8 331 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 PSME2Q9UL46 239 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 GPC6Q9Y625 555 aaPredicted RBP8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 THADAQ6YHU6 1953 aa8.29□□□□□ -1.08
CDC42SE1-204ENST00000483763 UNC13CQ8NB66 2214 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 A0A0A6YYC8 382 aaPredicted RBP8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 I3L1I5 382 aaPredicted RBP8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 EMC8O43402 210 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 LAMTOR5O43504 91 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 IFNA14P01570 189 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 CPMP14384 443 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 LIMS1P48059 325 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 KCNJ5P48544 419 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 AFF3P51826 1226 aaKnown RBP8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 PRR5P85299 388 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 SPIBQ01892 262 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 CFHR1Q03591 330 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 PRTGQ2VWP7 1150 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 ZC3H12BQ5HYM0 836 aaKnown RBP8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 MANEAQ5SRI9 462 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 ZNF691Q5VV52 312 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 DGAT2L6Q6ZPD8 337 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 USP53Q70EK8 1073 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 BMP8AQ7Z5Y6 402 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 C8orf59Q8N0T1 100 aaPredicted RBP8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 DTWD2Q8NBA8 298 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 CHDHQ8NE62 594 aaPredicted RBP8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 VANGL1Q8TAA9 524 aaPredicted RBP8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 CNIH3Q8TBE1 160 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 MIPOL1Q8TD10 442 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 SFXN5Q8TD22 340 aa8.28□□□□□ -1.08
CDC42SE1-204ENST00000483763 SLC35A4Q96G79 324 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms