RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 FCRL1Q96LA6 429 aa16.98■□□□□ 0.31
SMIM4-204ENST00000482728 FRMD6Q96NE9 622 aa16.98■□□□□ 0.31
SMIM4-204ENST00000482728 SACM1LQ9NTJ5 587 aa16.98■□□□□ 0.31
SMIM4-204ENST00000482728 PRODH2Q9UF12 536 aa16.98■□□□□ 0.31
SMIM4-204ENST00000482728 ZNF639Q9UID6 485 aa16.98■□□□□ 0.31
SMIM4-204ENST00000482728 NPIPA5E9PKD4 350 aa16.97■□□□□ 0.31
SMIM4-204ENST00000482728 UNC5CO95185 931 aa16.97■□□□□ 0.31
SMIM4-204ENST00000482728 LRATO95237 230 aa16.97■□□□□ 0.31
SMIM4-204ENST00000482728 NADKO95544 446 aaPredicted RBP16.97■□□□□ 0.31
SMIM4-204ENST00000482728 JUNP05412 331 aaKnown RBP16.97■□□□□ 0.31
SMIM4-204ENST00000482728 BCKDHAP12694 445 aa16.97■□□□□ 0.31
SMIM4-204ENST00000482728 ZNF24P17028 368 aa16.97■□□□□ 0.31
SMIM4-204ENST00000482728 SDC1P18827 310 aa16.97■□□□□ 0.31
SMIM4-204ENST00000482728 CNR1P21554 472 aa16.97■□□□□ 0.31
SMIM4-204ENST00000482728 NCBP2P52298 156 aaKnown RBP eCLIP16.97■□□□□ 0.31
SMIM4-204ENST00000482728 UBAP2LQ14157 1087 aaKnown RBP16.97■□□□□ 0.31
SMIM4-204ENST00000482728 CEBPEQ15744 281 aa16.97■□□□□ 0.31
SMIM4-204ENST00000482728 ZNF791Q3KP31 576 aaPredicted RBP16.97■□□□□ 0.31
SMIM4-204ENST00000482728 ZNF628Q5EBL2 1059 aa16.97■□□□□ 0.31
SMIM4-204ENST00000482728 C6orf136Q5SQH8 315 aa16.97■□□□□ 0.31
SMIM4-204ENST00000482728 FAM26EQ8N5C1 309 aa16.97■□□□□ 0.31
SMIM4-204ENST00000482728 GOLGA6L1Q8N7Z2 621 aa16.97■□□□□ 0.31
SMIM4-204ENST00000482728 C17orf47Q8NEP4 570 aa16.97■□□□□ 0.31
SMIM4-204ENST00000482728 OR52R1Q8NGF1 315 aa16.97■□□□□ 0.31
SMIM4-204ENST00000482728 CLHC1Q8NHS4 586 aa16.97■□□□□ 0.31
SMIM4-204ENST00000482728 ADIPOR1Q96A54 375 aa16.97■□□□□ 0.31
SMIM4-204ENST00000482728 PPCDCQ96CD2 204 aa16.97■□□□□ 0.31
SMIM4-204ENST00000482728 C3orf30Q96M34 536 aa16.97■□□□□ 0.31
SMIM4-204ENST00000482728 TSPAN10Q9H1Z9 355 aaPredicted RBP16.97■□□□□ 0.31
SMIM4-204ENST00000482728 REEP4Q9H6H4 257 aa16.97■□□□□ 0.31
SMIM4-204ENST00000482728 SH3BP4Q9P0V3 963 aa16.97■□□□□ 0.31
SMIM4-204ENST00000482728 GIMAP2Q9UG22 337 aa16.97■□□□□ 0.31
SMIM4-204ENST00000482728 NPIPA1Q9UND3 350 aa16.97■□□□□ 0.31
SMIM4-204ENST00000482728 EXO1Q9UQ84 846 aaKnown RBP16.97■□□□□ 0.31
SMIM4-204ENST00000482728 OSGIN2Q9Y236 505 aa16.97■□□□□ 0.31
SMIM4-204ENST00000482728 FLNBO75369 2602 aaKnown RBP16.96■□□□□ 0.31
SMIM4-204ENST00000482728 TP53I11O14683 189 aa16.96■□□□□ 0.31
SMIM4-204ENST00000482728 AGFG2O95081 481 aa16.96■□□□□ 0.31
SMIM4-204ENST00000482728 CBX7O95931 251 aa16.96■□□□□ 0.31
SMIM4-204ENST00000482728 FBXO45P0C2W1 286 aa16.96■□□□□ 0.31
SMIM4-204ENST00000482728 DDX5P17844 614 aaKnown RBP16.96■□□□□ 0.31
SMIM4-204ENST00000482728 GPX3P22352 226 aa16.96■□□□□ 0.31
SMIM4-204ENST00000482728 TDGF1P3P51864 188 aa16.96■□□□□ 0.31
SMIM4-204ENST00000482728 DCAF7P61962 342 aa16.96■□□□□ 0.31
SMIM4-204ENST00000482728 RBPJQ06330 500 aa16.96■□□□□ 0.31
SMIM4-204ENST00000482728 BST1Q10588 318 aa16.96■□□□□ 0.31
SMIM4-204ENST00000482728 PDCD2Q16342 344 aaPredicted RBP16.96■□□□□ 0.31
SMIM4-204ENST00000482728 PRSS53Q2L4Q9 553 aa16.96■□□□□ 0.31
SMIM4-204ENST00000482728 ATG16L1Q676U5 607 aa16.96■□□□□ 0.31
SMIM4-204ENST00000482728 TMEM64Q6YI46 380 aa16.96■□□□□ 0.31
SMIM4-204ENST00000482728 FAM47EQ6ZV65 393 aa16.96■□□□□ 0.31
SMIM4-204ENST00000482728 R3HCC1LQ7Z5L2 792 aaKnown RBP16.96■□□□□ 0.31
SMIM4-204ENST00000482728 TRIM42Q8IWZ5 723 aa16.96■□□□□ 0.31
SMIM4-204ENST00000482728 ZNF441Q8N8Z8 693 aa16.96■□□□□ 0.31
SMIM4-204ENST00000482728 FNDC5Q8NAU1 212 aa16.96■□□□□ 0.31
SMIM4-204ENST00000482728 OR5M3Q8NGP4 307 aa16.96■□□□□ 0.31
SMIM4-204ENST00000482728 ARL8AQ96BM9 186 aa16.96■□□□□ 0.31
SMIM4-204ENST00000482728 C20orf27Q9GZN8 174 aa16.96■□□□□ 0.31
SMIM4-204ENST00000482728 CNIH4Q9P003 139 aa16.96■□□□□ 0.31
SMIM4-204ENST00000482728 EIF3LQ9Y262 564 aaKnown RBP16.96■□□□□ 0.31
SMIM4-204ENST00000482728 NPFFR2Q9Y5X5 522 aa16.96■□□□□ 0.31
SMIM4-204ENST00000482728 USP9XQ93008 2570 aaPredicted RBP16.95■□□□□ 0.3
SMIM4-204ENST00000482728 DIDO1Q9BTC0 2240 aaKnown RBP16.95■□□□□ 0.3
SMIM4-204ENST00000482728 G3V3Y1 287 aa16.95■□□□□ 0.3
SMIM4-204ENST00000482728 TFECO14948 347 aaPredicted RBP16.95■□□□□ 0.3
SMIM4-204ENST00000482728 PLOD3O60568 738 aa16.95■□□□□ 0.3
SMIM4-204ENST00000482728 SLITRK5O94991 958 aa16.95■□□□□ 0.3
SMIM4-204ENST00000482728 PRPS2P11908 318 aa16.95■□□□□ 0.3
SMIM4-204ENST00000482728 HPCAL1P37235 193 aa16.95■□□□□ 0.3
SMIM4-204ENST00000482728 RFC3P40938 356 aa16.95■□□□□ 0.3
SMIM4-204ENST00000482728 PPICP45877 212 aa16.95■□□□□ 0.3
SMIM4-204ENST00000482728 TMED10P49755 219 aaKnown RBP16.95■□□□□ 0.3
SMIM4-204ENST00000482728 KCNK10P57789 538 aa16.95■□□□□ 0.3
SMIM4-204ENST00000482728 PLGLB1Q02325 96 aa16.95■□□□□ 0.3
SMIM4-204ENST00000482728 MAD2L1Q13257 205 aaPredicted RBP16.95■□□□□ 0.3
SMIM4-204ENST00000482728 IL23RQ5VWK5 629 aa16.95■□□□□ 0.3
SMIM4-204ENST00000482728 ANKRD26P1Q6NSI1 321 aa16.95■□□□□ 0.3
SMIM4-204ENST00000482728 LYPD8Q6UX82 237 aa16.95■□□□□ 0.3
SMIM4-204ENST00000482728 GK5Q6ZS86 529 aa16.95■□□□□ 0.3
SMIM4-204ENST00000482728 LIX1Q8N485 282 aa16.95■□□□□ 0.3
SMIM4-204ENST00000482728 ZFP62Q8NB50 900 aaPredicted RBP16.95■□□□□ 0.3
SMIM4-204ENST00000482728 SIMC1Q8NDZ2 872 aa16.95■□□□□ 0.3
SMIM4-204ENST00000482728 OR2M7Q8NG81 312 aa16.95■□□□□ 0.3
SMIM4-204ENST00000482728 HSPBAP1Q96EW2 488 aa16.95■□□□□ 0.3
SMIM4-204ENST00000482728 LCORQ96JN0 433 aaPredicted RBP16.95■□□□□ 0.3
SMIM4-204ENST00000482728 PPP1R36Q96LQ0 422 aa16.95■□□□□ 0.3
SMIM4-204ENST00000482728 AMDHD1Q96NU7 426 aa16.95■□□□□ 0.3
SMIM4-204ENST00000482728 SORT1Q99523 831 aa16.95■□□□□ 0.3
SMIM4-204ENST00000482728 FAM173AQ9BQD7 235 aa16.95■□□□□ 0.3
SMIM4-204ENST00000482728 C1orf50Q9BV19 199 aa16.95■□□□□ 0.3
SMIM4-204ENST00000482728 NXF5Q9H1B4 397 aaKnown RBP16.95■□□□□ 0.3
SMIM4-204ENST00000482728 GLIPR2Q9H4G4 154 aa16.95■□□□□ 0.3
SMIM4-204ENST00000482728 DEPPQ9NTK1 212 aa16.95■□□□□ 0.3
SMIM4-204ENST00000482728 TAS2R9Q9NYW1 312 aa16.95■□□□□ 0.3
SMIM4-204ENST00000482728 DOPEY2Q9Y3R5 2298 aa16.95■□□□□ 0.3
SMIM4-204ENST00000482728 NINQ8N4C6 2090 aa16.94■□□□□ 0.3
SMIM4-204ENST00000482728 PDPK1O15530 556 aa16.94■□□□□ 0.3
SMIM4-204ENST00000482728 ASNA1O43681 348 aa16.94■□□□□ 0.3
SMIM4-204ENST00000482728 CCL3P10147 92 aa16.94■□□□□ 0.3
SMIM4-204ENST00000482728 H2AFXP16104 143 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms