RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 CEACAM4O75871 244 aa14.26□□□□□ -0.13
CCM2-215ENST00000482714 CCT3P49368 545 aaKnown RBP14.26□□□□□ -0.13
CCM2-215ENST00000482714 RNF4P78317 190 aa14.26□□□□□ -0.13
CCM2-215ENST00000482714 TXNL4AP83876 142 aaKnown RBP14.26□□□□□ -0.13
CCM2-215ENST00000482714 HSPB3Q12988 150 aa14.26□□□□□ -0.13
CCM2-215ENST00000482714 CYLC2Q14093 348 aaPredicted RBP14.26□□□□□ -0.13
CCM2-215ENST00000482714 UBAP2LQ14157 1087 aaKnown RBP14.26□□□□□ -0.13
CCM2-215ENST00000482714 VPS26BQ4G0F5 336 aa14.26□□□□□ -0.13
CCM2-215ENST00000482714 ATP1A1-AS1Q5TC04 95 aa14.26□□□□□ -0.13
CCM2-215ENST00000482714 BORAQ6PGQ7 559 aa14.26□□□□□ -0.13
CCM2-215ENST00000482714 SLC29A4Q7RTT9 530 aa14.26□□□□□ -0.13
CCM2-215ENST00000482714 GPR155Q7Z3F1 870 aa14.26□□□□□ -0.13
CCM2-215ENST00000482714 GALNT16Q8N428 558 aa14.26□□□□□ -0.13
CCM2-215ENST00000482714 OR7G2Q8NG99 324 aa14.26□□□□□ -0.13
CCM2-215ENST00000482714 GTF2H4Q92759 462 aa14.26□□□□□ -0.13
CCM2-215ENST00000482714 LMF1Q96S06 567 aa14.26□□□□□ -0.13
CCM2-215ENST00000482714 SIRT3Q9NTG7 399 aaPredicted RBP14.26□□□□□ -0.13
CCM2-215ENST00000482714 DDX18Q9NVP1 670 aaKnown RBP14.26□□□□□ -0.13
CCM2-215ENST00000482714 VPS4AQ9UN37 437 aa14.26□□□□□ -0.13
CCM2-215ENST00000482714 ZFHX4Q86UP3 3567 aa14.26□□□□□ -0.13
CCM2-215ENST00000482714 NUP214P35658 2090 aaPredicted RBP14.26□□□□□ -0.13
CCM2-215ENST00000482714 PTPRQQ9UMZ3 2332 aa14.26□□□□□ -0.13
CCM2-215ENST00000482714 NR5A2O00482 541 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 ANGPT2O15123 496 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 CPSF4O95639 269 aaKnown RBP14.25□□□□□ -0.13
CCM2-215ENST00000482714 CBX7O95931 251 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 CXADRP78310 365 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 MRPS35P82673 323 aaKnown RBP14.25□□□□□ -0.13
CCM2-215ENST00000482714 Q0VFX4 171 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 ITPR1Q14643 2758 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 LTB4RQ15722 352 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 TIGD2Q4W5G0 525 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 TMEM107Q6UX40 140 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 RPS19BP1Q86WX3 136 aaKnown RBP14.25□□□□□ -0.13
CCM2-215ENST00000482714 SLC5A8Q8N695 610 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 SLC15A4Q8N697 577 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 PCYOX1LQ8NBM8 494 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 NUP43Q8NFH3 380 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 OR56A1Q8NGH5 318 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 OR4A15Q8NGL6 344 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 KAT2AQ92830 837 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 VPS33AQ96AX1 596 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 THOC3Q96J01 351 aaKnown RBP14.25□□□□□ -0.13
CCM2-215ENST00000482714 ZNF354BQ96LW1 612 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 PRORYQ9H606 182 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 SERHLQ9NQF3 203 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 GIN1Q9NXP7 522 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 BCAP29Q9UHQ4 241 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 ERVK-11Q9UQG0 969 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 PCDHGB7Q9Y5F8 929 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 GMEB1Q9Y692 573 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 ZFYVE26Q68DK2 2539 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 A0A096LPI6 279 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 CAPN14A8MX76 684 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 C9JVG2 144 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 KCNH1O95259 989 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 PSMG1O95456 288 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 ANP32DO95626 131 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 KRT75O95678 551 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 CLPSP04118 112 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 KRT16P08779 473 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 CAPN3P20807 821 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 DRD5P21918 477 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 ITGA3P26006 1051 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 SSTR4P31391 388 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 MC3RP41968 323 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 PPICP45877 212 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 PRIM2P49643 509 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 EMDP50402 254 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 CDK9P50750 372 aaKnown RBP14.25□□□□□ -0.13
CCM2-215ENST00000482714 CRB2Q5IJ48 1285 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 LRIF1Q5T3J3 769 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 HLA-DQA1Q5Y7H0 255 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 ZNF621Q6ZSS3 439 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 ANKRD46Q86W74 232 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 CLECL1Q8IZS7 167 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 OR52R1Q8NGF1 315 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 C16orf52Q8NHV5 167 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 PSMF1Q92530 271 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 HOXB13Q92826 284 aaPredicted RBP14.25□□□□□ -0.13
CCM2-215ENST00000482714 FAM120BQ96EK7 910 aaKnown RBP14.25□□□□□ -0.13
CCM2-215ENST00000482714 CXorf36Q9H7Y0 433 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 ZCCHC3Q9NUD5 404 aaKnown RBP14.25□□□□□ -0.13
CCM2-215ENST00000482714 PCDHGA9Q9Y5G4 932 aaKnown RBP14.25□□□□□ -0.13
CCM2-215ENST00000482714 SNX8Q9Y5X2 465 aa14.25□□□□□ -0.13
CCM2-215ENST00000482714 TRBV11-1A0A0K0K1C0 115 aa14.24□□□□□ -0.13
CCM2-215ENST00000482714 LOC100653049A0A140TA62 436 aa14.24□□□□□ -0.13
CCM2-215ENST00000482714 C2orf92A0A1B0GVN3 265 aa14.24□□□□□ -0.13
CCM2-215ENST00000482714 DUXAA6NLW8 204 aa14.24□□□□□ -0.13
CCM2-215ENST00000482714 HRKO00198 91 aa14.24□□□□□ -0.13
CCM2-215ENST00000482714 KRT34O76011 436 aa14.24□□□□□ -0.13
CCM2-215ENST00000482714 PPIBP23284 216 aaKnown RBP14.24□□□□□ -0.13
CCM2-215ENST00000482714 CCL11P51671 97 aa14.24□□□□□ -0.13
CCM2-215ENST00000482714 MNAT1P51948 309 aa14.24□□□□□ -0.13
CCM2-215ENST00000482714 TP53BP2Q13625 1128 aa14.24□□□□□ -0.13
CCM2-215ENST00000482714 KRT72Q14CN4 511 aa14.24□□□□□ -0.13
CCM2-215ENST00000482714 MEP1AQ16819 746 aa14.24□□□□□ -0.13
CCM2-215ENST00000482714 MMEL1Q495T6 779 aa14.24□□□□□ -0.13
CCM2-215ENST00000482714 SPDYE7PQ495Y7 208 aa14.24□□□□□ -0.13
CCM2-215ENST00000482714 AGAP7PQ5VUJ5 663 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms