RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 KCNK13Q9HB14 408 aa8.42□□□□□ -1.06
VCP-206ENST00000480327 AGPAT4Q9NRZ5 378 aa8.42□□□□□ -1.06
VCP-206ENST00000480327 GIMAP4Q9NUV9 329 aa8.42□□□□□ -1.06
VCP-206ENST00000480327 AIG1Q9NVV5 245 aa8.42□□□□□ -1.06
VCP-206ENST00000480327 ASIC5Q9NY37 505 aa8.42□□□□□ -1.06
VCP-206ENST00000480327 FAM53CQ9NYF3 392 aa8.42□□□□□ -1.06
VCP-206ENST00000480327 WBP11Q9Y2W2 641 aaKnown RBP8.42□□□□□ -1.06
VCP-206ENST00000480327 GTF3C1Q12789 2109 aa8.41□□□□□ -1.06
VCP-206ENST00000480327 TRBV11-1A0A0K0K1C0 115 aa8.41□□□□□ -1.06
VCP-206ENST00000480327 A0A1W2PQ72 361 aa8.41□□□□□ -1.06
VCP-206ENST00000480327 SCAMP2O15127 329 aaKnown RBP8.41□□□□□ -1.06
VCP-206ENST00000480327 PDPK1O15530 556 aa8.41□□□□□ -1.06
VCP-206ENST00000480327 PRKNO60260 465 aaPredicted RBP8.41□□□□□ -1.06
VCP-206ENST00000480327 SERPINA7P05543 415 aa8.41□□□□□ -1.06
VCP-206ENST00000480327 LAMP1P11279 417 aa8.41□□□□□ -1.06
VCP-206ENST00000480327 NCF2P19878 526 aaPredicted RBP8.41□□□□□ -1.06
VCP-206ENST00000480327 SSTR4P31391 388 aa8.41□□□□□ -1.06
VCP-206ENST00000480327 LSP1P33241 339 aa8.41□□□□□ -1.06
VCP-206ENST00000480327 SOX11P35716 441 aa8.41□□□□□ -1.06
VCP-206ENST00000480327 ARFIP2P53365 341 aa8.41□□□□□ -1.06
VCP-206ENST00000480327 CLDN8P56748 225 aa8.41□□□□□ -1.06
VCP-206ENST00000480327 MRPS35P82673 323 aaKnown RBP8.41□□□□□ -1.06
VCP-206ENST00000480327 HSPB3Q12988 150 aa8.41□□□□□ -1.06
VCP-206ENST00000480327 PDE7AQ13946 482 aa8.41□□□□□ -1.06
VCP-206ENST00000480327 ELOAQ14241 798 aaKnown RBP8.41□□□□□ -1.06
VCP-206ENST00000480327 EXT1Q16394 746 aa8.41□□□□□ -1.06
VCP-206ENST00000480327 MPEG1Q2M385 716 aa8.41□□□□□ -1.06
VCP-206ENST00000480327 CPTPQ5TA50 214 aa8.41□□□□□ -1.06
VCP-206ENST00000480327 C6orf163Q5TEZ5 329 aa8.41□□□□□ -1.06
VCP-206ENST00000480327 AGAP7PQ5VUJ5 663 aa8.41□□□□□ -1.06
VCP-206ENST00000480327 IRAK1BP1Q5VVH5 260 aa8.41□□□□□ -1.06
VCP-206ENST00000480327 B3GNTL1Q67FW5 361 aaPredicted RBP8.41□□□□□ -1.06
VCP-206ENST00000480327 SP5Q6BEB4 398 aaPredicted RBP8.41□□□□□ -1.06
VCP-206ENST00000480327 PLAG1Q6DJT9 500 aa8.41□□□□□ -1.06
VCP-206ENST00000480327 LINC00696Q6ZRV3 163 aa8.41□□□□□ -1.06
VCP-206ENST00000480327 ZNF551Q7Z340 670 aaPredicted RBP8.41□□□□□ -1.06
VCP-206ENST00000480327 R3HCC1LQ7Z5L2 792 aaKnown RBP8.41□□□□□ -1.06
VCP-206ENST00000480327 GALNT12Q8IXK2 581 aa8.41□□□□□ -1.06
VCP-206ENST00000480327 SLC34A3Q8N130 599 aa8.41□□□□□ -1.06
VCP-206ENST00000480327 SIMC1Q8NDZ2 872 aa8.41□□□□□ -1.06
VCP-206ENST00000480327 OR9A2Q8NGT5 310 aa8.41□□□□□ -1.06
VCP-206ENST00000480327 OR14A16Q8NHC5 309 aa8.41□□□□□ -1.06
VCP-206ENST00000480327 M1APQ8TC57 530 aa8.41□□□□□ -1.06
VCP-206ENST00000480327 SLC2A12Q8TD20 617 aa8.41□□□□□ -1.06
VCP-206ENST00000480327 BRIX1Q8TDN6 353 aaKnown RBP8.41□□□□□ -1.06
VCP-206ENST00000480327 THAP3Q8WTV1 239 aaPredicted RBP8.41□□□□□ -1.06
VCP-206ENST00000480327 KAT2AQ92830 837 aa8.41□□□□□ -1.06
VCP-206ENST00000480327 DAZLQ92904 295 aaKnown RBP8.41□□□□□ -1.06
VCP-206ENST00000480327 CHMP6Q96FZ7 201 aa8.41□□□□□ -1.06
VCP-206ENST00000480327 SENP5Q96HI0 755 aaPredicted RBP8.41□□□□□ -1.06
VCP-206ENST00000480327 MAGED4Q96JG8 741 aa8.41□□□□□ -1.06
VCP-206ENST00000480327 TEX37Q96LM6 180 aa8.41□□□□□ -1.06
VCP-206ENST00000480327 AGAP4Q96P64 663 aa8.41□□□□□ -1.06
VCP-206ENST00000480327 PELOQ9BRX2 385 aaKnown RBP8.41□□□□□ -1.06
VCP-206ENST00000480327 CCDC28BQ9BUN5 200 aa8.41□□□□□ -1.06
VCP-206ENST00000480327 LHPPQ9H008 270 aa8.41□□□□□ -1.06
VCP-206ENST00000480327 GLIPR2Q9H4G4 154 aa8.41□□□□□ -1.06
VCP-206ENST00000480327 ANKRA2Q9H9E1 313 aa8.41□□□□□ -1.06
VCP-206ENST00000480327 LIN28AQ9H9Z2 209 aaKnown RBP8.41□□□□□ -1.06
VCP-206ENST00000480327 EHD3Q9NZN3 535 aa8.41□□□□□ -1.06
VCP-206ENST00000480327 PTGFRNQ9P2B2 879 aa8.41□□□□□ -1.06
VCP-206ENST00000480327 ATP6V1HQ9UI12 483 aa8.41□□□□□ -1.06
VCP-206ENST00000480327 ERVK-19Q9WJR5 959 aa8.41□□□□□ -1.06
VCP-206ENST00000480327 GPR45Q9Y5Y3 372 aa8.41□□□□□ -1.06
VCP-206ENST00000480327 NF1P21359 2839 aa8.41□□□□□ -1.06
VCP-206ENST00000480327 MED13LQ71F56 2210 aa8.41□□□□□ -1.06
VCP-206ENST00000480327 SETD2Q9BYW2 2564 aaPredicted RBP8.4□□□□□ -1.06
VCP-206ENST00000480327 C2CD3Q4AC94 2353 aa8.4□□□□□ -1.06
VCP-206ENST00000480327 MYO1GB0I1T2 1018 aa8.4□□□□□ -1.06
VCP-206ENST00000480327 ANKRD28O15084 1053 aa8.4□□□□□ -1.06
VCP-206ENST00000480327 HNRNPRO43390 633 aaKnown RBP8.4□□□□□ -1.06
VCP-206ENST00000480327 DYRK3O43781 588 aa8.4□□□□□ -1.06
VCP-206ENST00000480327 MAN1A2O60476 641 aa8.4□□□□□ -1.06
VCP-206ENST00000480327 NME6O75414 186 aaPredicted RBP8.4□□□□□ -1.06
VCP-206ENST00000480327 F10P00742 488 aa8.4□□□□□ -1.06
VCP-206ENST00000480327 ATP1B1P05026 303 aa8.4□□□□□ -1.06
VCP-206ENST00000480327 ICAM2P13598 275 aa8.4□□□□□ -1.06
VCP-206ENST00000480327 IDO1P14902 403 aa8.4□□□□□ -1.06
VCP-206ENST00000480327 PCSK2P16519 638 aa8.4□□□□□ -1.06
VCP-206ENST00000480327 PRPS1L1P21108 318 aa8.4□□□□□ -1.06
VCP-206ENST00000480327 IL12AP29459 219 aa8.4□□□□□ -1.06
VCP-206ENST00000480327 NTSP30990 170 aa8.4□□□□□ -1.06
VCP-206ENST00000480327 MPIP34949 423 aa8.4□□□□□ -1.06
VCP-206ENST00000480327 RPL3P39023 403 aaKnown RBP8.4□□□□□ -1.06
VCP-206ENST00000480327 CLCN2P51788 898 aa8.4□□□□□ -1.06
VCP-206ENST00000480327 DGKQP52824 942 aa8.4□□□□□ -1.06
VCP-206ENST00000480327 MANFP55145 182 aaKnown RBP8.4□□□□□ -1.06
VCP-206ENST00000480327 KCNK10P57789 538 aa8.4□□□□□ -1.06
VCP-206ENST00000480327 BIKQ13323 160 aa8.4□□□□□ -1.06
VCP-206ENST00000480327 MFAP5Q13361 173 aa8.4□□□□□ -1.06
VCP-206ENST00000480327 EXOSC7Q15024 291 aaKnown RBP8.4□□□□□ -1.06
VCP-206ENST00000480327 TERF2Q15554 542 aa8.4□□□□□ -1.06
VCP-206ENST00000480327 PRICKLE4Q2TBC4 344 aa8.4□□□□□ -1.06
VCP-206ENST00000480327 TRMT12Q53H54 448 aaKnown RBP8.4□□□□□ -1.06
VCP-206ENST00000480327 OR4F3Q6IEY1 312 aa8.4□□□□□ -1.06
VCP-206ENST00000480327 RPUSD3Q6P087 351 aaKnown RBP8.4□□□□□ -1.06
VCP-206ENST00000480327 PAOXQ6QHF9 649 aa8.4□□□□□ -1.06
VCP-206ENST00000480327 ISLR2Q6UXK2 745 aa8.4□□□□□ -1.06
VCP-206ENST00000480327 C16orf47Q6ZP98 133 aaPredicted RBP8.4□□□□□ -1.06
VCP-206ENST00000480327 FJX1Q86VR8 437 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms