RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 GOLM1Q8NBJ4 401 aa14.38□□□□□ -0.11
HMGA1-206ENST00000478214 POGLUT1Q8NBL1 392 aa14.38□□□□□ -0.11
HMGA1-206ENST00000478214 OR52R1Q8NGF1 315 aa14.38□□□□□ -0.11
HMGA1-206ENST00000478214 CLHC1Q8NHS4 586 aa14.38□□□□□ -0.11
HMGA1-206ENST00000478214 ZNF675Q8TD23 568 aa14.38□□□□□ -0.11
HMGA1-206ENST00000478214 KAT2AQ92830 837 aa14.38□□□□□ -0.11
HMGA1-206ENST00000478214 GFM2Q969S9 779 aaKnown RBP14.38□□□□□ -0.11
HMGA1-206ENST00000478214 TP53INP1Q96A56 240 aa14.38□□□□□ -0.11
HMGA1-206ENST00000478214 SPACA9Q96E40 222 aaPredicted RBP14.38□□□□□ -0.11
HMGA1-206ENST00000478214 C3orf30Q96M34 536 aa14.38□□□□□ -0.11
HMGA1-206ENST00000478214 GPR137Q96N19 417 aa14.38□□□□□ -0.11
HMGA1-206ENST00000478214 TSSK3Q96PN8 268 aa14.38□□□□□ -0.11
HMGA1-206ENST00000478214 CCT7Q99832 543 aa14.38□□□□□ -0.11
HMGA1-206ENST00000478214 PAIP2Q9BPZ3 127 aaKnown RBP14.38□□□□□ -0.11
HMGA1-206ENST00000478214 ITPAQ9BY32 194 aa14.38□□□□□ -0.11
HMGA1-206ENST00000478214 ANKRA2Q9H9E1 313 aa14.38□□□□□ -0.11
HMGA1-206ENST00000478214 TAS2R7Q9NYW3 318 aa14.38□□□□□ -0.11
HMGA1-206ENST00000478214 BAIAP2L1Q9UHR4 511 aa14.38□□□□□ -0.11
HMGA1-206ENST00000478214 ERRFI1Q9UJM3 462 aaPredicted RBP14.38□□□□□ -0.11
HMGA1-206ENST00000478214 PTPN13Q12923 2485 aa14.37□□□□□ -0.11
HMGA1-206ENST00000478214 ATP6AP2A0A1C7CYW4 349 aa14.37□□□□□ -0.11
HMGA1-206ENST00000478214 MYO1GB0I1T2 1018 aa14.37□□□□□ -0.11
HMGA1-206ENST00000478214 TMEM114B3SHH9 223 aa14.37□□□□□ -0.11
HMGA1-206ENST00000478214 AKAP10O43572 662 aa14.37□□□□□ -0.11
HMGA1-206ENST00000478214 PEX11AO75192 247 aa14.37□□□□□ -0.11
HMGA1-206ENST00000478214 ATP6AP2O75787 350 aa14.37□□□□□ -0.11
HMGA1-206ENST00000478214 LRATO95237 230 aa14.37□□□□□ -0.11
HMGA1-206ENST00000478214 MPIP34949 423 aa14.37□□□□□ -0.11
HMGA1-206ENST00000478214 WDR4P57081 412 aaKnown RBP14.37□□□□□ -0.11
HMGA1-206ENST00000478214 NNATQ16517 81 aa14.37□□□□□ -0.11
HMGA1-206ENST00000478214 HHATQ5VTY9 493 aa14.37□□□□□ -0.11
HMGA1-206ENST00000478214 ANKRD26P1Q6NSI1 321 aa14.37□□□□□ -0.11
HMGA1-206ENST00000478214 ZGRF1Q86YA3 2104 aa14.37□□□□□ -0.11
HMGA1-206ENST00000478214 FAM9CQ8IZT9 166 aa14.37□□□□□ -0.11
HMGA1-206ENST00000478214 ZNF781Q8N8C0 355 aa14.37□□□□□ -0.11
HMGA1-206ENST00000478214 FAM13CQ8NE31 585 aa14.37□□□□□ -0.11
HMGA1-206ENST00000478214 OR2M7Q8NG81 312 aa14.37□□□□□ -0.11
HMGA1-206ENST00000478214 OR10G3Q8NGC4 313 aa14.37□□□□□ -0.11
HMGA1-206ENST00000478214 MGARPQ8TDB4 240 aa14.37□□□□□ -0.11
HMGA1-206ENST00000478214 TLCD1Q96CP7 247 aa14.37□□□□□ -0.11
HMGA1-206ENST00000478214 C20orf27Q9GZN8 174 aa14.37□□□□□ -0.11
HMGA1-206ENST00000478214 NXF5Q9H1B4 397 aaKnown RBP14.37□□□□□ -0.11
HMGA1-206ENST00000478214 SH2D2AQ9NP31 389 aa14.37□□□□□ -0.11
HMGA1-206ENST00000478214 SACM1LQ9NTJ5 587 aa14.37□□□□□ -0.11
HMGA1-206ENST00000478214 CFL2Q9Y281 166 aa14.37□□□□□ -0.11
HMGA1-206ENST00000478214 TMED5Q9Y3A6 229 aa14.37□□□□□ -0.11
HMGA1-206ENST00000478214 DOPEY2Q9Y3R5 2298 aa14.36□□□□□ -0.11
HMGA1-206ENST00000478214 TFECO14948 347 aaPredicted RBP14.36□□□□□ -0.11
HMGA1-206ENST00000478214 ASNA1O43681 348 aa14.36□□□□□ -0.11
HMGA1-206ENST00000478214 HS6ST1O60243 411 aa14.36□□□□□ -0.11
HMGA1-206ENST00000478214 NME6O75414 186 aaPredicted RBP14.36□□□□□ -0.11
HMGA1-206ENST00000478214 P04436 131 aa14.36□□□□□ -0.11
HMGA1-206ENST00000478214 JUNP05412 331 aaKnown RBP14.36□□□□□ -0.11
HMGA1-206ENST00000478214 RNF224P0DH78 156 aa14.36□□□□□ -0.11
HMGA1-206ENST00000478214 BCKDHAP12694 445 aa14.36□□□□□ -0.11
HMGA1-206ENST00000478214 CNR1P21554 472 aa14.36□□□□□ -0.11
HMGA1-206ENST00000478214 GRK2P25098 689 aa14.36□□□□□ -0.11
HMGA1-206ENST00000478214 PIGAP37287 484 aa14.36□□□□□ -0.11
HMGA1-206ENST00000478214 SLC1A6P48664 564 aa14.36□□□□□ -0.11
HMGA1-206ENST00000478214 DNASE1L1P49184 302 aa14.36□□□□□ -0.11
HMGA1-206ENST00000478214 EMDP50402 254 aa14.36□□□□□ -0.11
HMGA1-206ENST00000478214 NCBP2P52298 156 aaKnown RBP eCLIP14.36□□□□□ -0.11
HMGA1-206ENST00000478214 STX3Q13277 289 aa14.36□□□□□ -0.11
HMGA1-206ENST00000478214 KRTCAP3Q53RY4 240 aa14.36□□□□□ -0.11
HMGA1-206ENST00000478214 SLC22A10Q63ZE4 541 aa14.36□□□□□ -0.11
HMGA1-206ENST00000478214 FAM47EQ6ZV65 393 aa14.36□□□□□ -0.11
HMGA1-206ENST00000478214 PRR22Q8IZ63 422 aa14.36□□□□□ -0.11
HMGA1-206ENST00000478214 C17orf47Q8NEP4 570 aa14.36□□□□□ -0.11
HMGA1-206ENST00000478214 OR7G2Q8NG99 324 aa14.36□□□□□ -0.11
HMGA1-206ENST00000478214 OR5M3Q8NGP4 307 aa14.36□□□□□ -0.11
HMGA1-206ENST00000478214 PAQR8Q8TEZ7 354 aa14.36□□□□□ -0.11
HMGA1-206ENST00000478214 PPP3R2Q96LZ3 170 aa14.36□□□□□ -0.11
HMGA1-206ENST00000478214 SORT1Q99523 831 aa14.36□□□□□ -0.11
HMGA1-206ENST00000478214 FAM173AQ9BQD7 235 aa14.36□□□□□ -0.11
HMGA1-206ENST00000478214 GLIPR2Q9H4G4 154 aa14.36□□□□□ -0.11
HMGA1-206ENST00000478214 SLC5A6Q9Y289 635 aa14.36□□□□□ -0.11
HMGA1-206ENST00000478214 RAP2CQ9Y3L5 183 aa14.36□□□□□ -0.11
HMGA1-206ENST00000478214 NPFFR2Q9Y5X5 522 aa14.36□□□□□ -0.11
HMGA1-206ENST00000478214 CHCHD2Q9Y6H1 151 aaPredicted RBP14.36□□□□□ -0.11
HMGA1-206ENST00000478214 USP9YO00507 2555 aaPredicted RBP14.35□□□□□ -0.11
HMGA1-206ENST00000478214 ZNHIT1O43257 154 aa14.35□□□□□ -0.11
HMGA1-206ENST00000478214 LRRTM2O43300 516 aa14.35□□□□□ -0.11
HMGA1-206ENST00000478214 STSP08842 583 aa14.35□□□□□ -0.11
HMGA1-206ENST00000478214 NTSP30990 170 aa14.35□□□□□ -0.11
HMGA1-206ENST00000478214 NRG3P56975 720 aa14.35□□□□□ -0.11
HMGA1-206ENST00000478214 FBXW4P57775 412 aa14.35□□□□□ -0.11
HMGA1-206ENST00000478214 HSF1Q00613 529 aa14.35□□□□□ -0.11
HMGA1-206ENST00000478214 PLGLB1Q02325 96 aa14.35□□□□□ -0.11
HMGA1-206ENST00000478214 BST1Q10588 318 aa14.35□□□□□ -0.11
HMGA1-206ENST00000478214 NTRK2Q16620 822 aa14.35□□□□□ -0.11
HMGA1-206ENST00000478214 ATP6AP1LQ52LC2 224 aa14.35□□□□□ -0.11
HMGA1-206ENST00000478214 C4orf17Q53FE4 359 aa14.35□□□□□ -0.11
HMGA1-206ENST00000478214 ZNF385BQ569K4 471 aa14.35□□□□□ -0.11
HMGA1-206ENST00000478214 CMPK2Q5EBM0 449 aa14.35□□□□□ -0.11
HMGA1-206ENST00000478214 C6orf136Q5SQH8 315 aa14.35□□□□□ -0.11
HMGA1-206ENST00000478214 PRAMEF20Q5VT98 475 aa14.35□□□□□ -0.11
HMGA1-206ENST00000478214 C1QL3Q5VWW1 255 aa14.35□□□□□ -0.11
HMGA1-206ENST00000478214 DND1Q8IYX4 353 aaKnown RBP14.35□□□□□ -0.11
HMGA1-206ENST00000478214 ARL8AQ96BM9 186 aa14.35□□□□□ -0.11
HMGA1-206ENST00000478214 ERP27Q96DN0 273 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms