RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 C4orf48Q5BLP8 95 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 COX20Q5RI15 118 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 LRRC8EQ6NSJ5 796 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 SLC30A6Q6NXT4 461 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 TMIGD1Q6UXZ0 262 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 ZNF793Q6ZN11 406 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 RNF111Q6ZNA4 994 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 ZNF662Q6ZS27 426 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 FAM214BQ7L5A3 538 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 VN1R5Q7Z5H4 357 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 UBE3DQ7Z6J8 389 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 ATG4DQ86TL0 474 aaPredicted RBP6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 PRUNE1Q86TP1 453 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 GPSM1Q86YR5 675 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 PALM2Q8IXS6 379 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 TTLQ8NG68 377 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 RDH11Q8TC12 318 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 FAM168AQ92567 244 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 GCDHQ92947 438 aaPredicted RBP6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 ADIPOR1Q96A54 375 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 FBXL8Q96CD0 374 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 ADAD1Q96M93 576 aaKnown RBP6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 CCDC42Q96M95 316 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 DGAT2Q96PD7 388 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 ERVK-6Q9BXR3 956 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 ACTR8Q9H981 624 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 SNX15Q9NRS6 342 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 RAB6BQ9NRW1 208 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 LMBRD1Q9NUN5 540 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 ARL15Q9NXU5 204 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 BFARQ9NZS9 450 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 ERVK-19Q9WJR5 959 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 SLC22A14Q9Y267 594 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 GPR52Q9Y2T5 361 aa6.56□□□□□ -1.36
SPTLC1-205ENST00000477888 TCRBV7S2A1N4TA0A589 114 aa6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 CTAGE9A4FU28 777 aa6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 DPRXA6NFQ7 191 aa6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 FAM157AC9JC47 383 aa6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 AIFM1O95831 613 aa6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 TGFAP01135 160 aa6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 ETS1P14921 441 aa6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 PSMB1P20618 241 aaKnown RBP6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 PTNP21246 168 aa6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 MGAT1P26572 445 aa6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 GSTM2P28161 218 aa6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 SRD5A2P31213 254 aa6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 TMED10P49755 219 aaKnown RBP6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 SUCLG1P53597 346 aaKnown RBP6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 AP1S2P56377 157 aa6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 UBASH3AP57075 661 aa6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 B3GALT5-AS1P59052 145 aa6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 RPP38P78345 283 aaKnown RBP6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 BIKQ13323 160 aa6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 SNTA1Q13424 505 aa6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 OASLQ15646 514 aaKnown RBP6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 SPRED3Q2MJR0 410 aa6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 ZNF470Q6ECI4 717 aa6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 SEZ6L2Q6UXD5 910 aa6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 SLCO4C1Q6ZQN7 724 aa6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 CHMP1BQ7LBR1 199 aa6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 TMPRSS11BQ86T26 416 aa6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 THOC6Q86W42 341 aaKnown RBP6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 DENND6AQ8IWF6 608 aa6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 ST13P4Q8IZP2 240 aaPredicted RBP6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 LRRC17Q8N6Y2 441 aa6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 BBOF1Q8ND07 529 aa6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 KBTBD8Q8NFY9 601 aa6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 FNDC9Q8TBE3 224 aa6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 CCT6BQ92526 530 aa6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 HTRA1Q92743 480 aa6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 KAT2AQ92830 837 aa6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 HGDQ93099 445 aa6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 SFXN2Q96NB2 322 aa6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 NODALQ96S42 347 aa6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 CCDC68Q9H2F9 335 aa6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 GALNT9Q9HCQ5 603 aa6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 FBXO6Q9NRD1 293 aaPredicted RBP6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 SYBUQ9NX95 663 aa6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 CISD1Q9NZ45 108 aaKnown RBP6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 SOX13Q9UN79 622 aa6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 MRPS18CQ9Y3D5 142 aaKnown RBP6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 DYRK1BQ9Y463 629 aa6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 ZNF175Q9Y473 711 aa6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 MAD1L1Q9Y6D9 718 aa6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 COMMD10Q9Y6G5 202 aa6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 KCNE2Q9Y6J6 123 aa6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 FREM3P0C091 2139 aa6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 MED12LQ86YW9 2145 aa6.55□□□□□ -1.36
SPTLC1-205ENST00000477888 VWFP04275 2813 aa6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 RYR3Q15413 4870 aa6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 GOLGA6L9A6NEM1 432 aa6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 VWC2LB2RUY7 222 aa6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 H0YC42 278 aa6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 RAMP1O60894 148 aa6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 HAUS5O94927 633 aa6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 IFNB1P01574 187 aa6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 FESP07332 822 aa6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 CCDC166P0CW27 439 aa6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 C1GALT1C1LP0DN25 315 aa6.54□□□□□ -1.36
SPTLC1-205ENST00000477888 ALOX15P16050 662 aaPredicted RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 271.5 ms